RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 GAGE7O76087 117 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 GAGE12FP0CL80 117 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 GAGE12GP0CL81 117 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 GAGE12IP0CL82 117 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 SCGB1C2P0DMR2 95 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 GAGE4Q13068 117 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 PRR9Q5T870 116 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 UNQ9165/PRO28630Q6UXU0 137 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 DPF1Q92782 380 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 PIEZO1Q92508 2521 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 METTL26Q96S19 204 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 TRAV26-2A0A0B4J265 109 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 TRAV40A0A0B4J280 105 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 J3KRW8 73 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 C20orf173Q96LM9 149 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 SLC50A1Q9BRV3 221 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 IGHV4-61A0A0C4DH41 118 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 SNCGO76070 127 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 C12orf74Q32Q52 190 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 LGALS9BQ3B8N2 356 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 LGALS9CQ6DKI2 356 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 U3KQE9 123 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 TRBV25-1A0A075B6N4 114 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 TRAV41A0A0B4J266 112 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 IGHV7-4-1A0A0J9YVY3 117 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 SRSF2Q01130 221 aaKnown RBP7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 ZC2HC1BQ5TFG8 222 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 CEND1Q8N111 149 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 KIR2DL4Q99706 377 aa7.94□□□□□ -1.14
CLSTN1-203ENST00000435891 CENPEQ02224 2701 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 IGKV2D-26A0A0A0MRZ7 120 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 TRBV7-1A0A0A6YYK4 115 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 RBAKDNA6NC62 111 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 IGHV4-38-2P0DP08 117 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 LY6EQ16553 131 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 C19orf54Q5BKX5 351 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 Q6ZS46 218 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 FOXC2Q99958 501 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 YAE1D1Q9NRH1 226 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 LEPP41159 167 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 TMEM78Q5T7P6 136 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 E9PLD3 99 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 CCDC179H3BU77 68 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 GPHB5Q86YW7 130 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 MAP1LC3AQ9H492 121 aa7.93□□□□□ -1.14
CLSTN1-203ENST00000435891 IGHV3-11P01762 117 aa7.92□□□□□ -1.14
CLSTN1-203ENST00000435891 MOB4Q9Y3A3 225 aa7.92□□□□□ -1.14
CLSTN1-203ENST00000435891 USP9YO00507 2555 aaPredicted RBP7.92□□□□□ -1.14
CLSTN1-203ENST00000435891 IGSF10Q6WRI0 2623 aa7.92□□□□□ -1.14
CLSTN1-203ENST00000435891 KLK15Q9H2R5 256 aa7.92□□□□□ -1.14
CLSTN1-203ENST00000435891 CDIP1Q9H305 208 aa7.92□□□□□ -1.14
CLSTN1-203ENST00000435891 ODF1Q14990 250 aa7.92□□□□□ -1.14
CLSTN1-203ENST00000435891 C16orf92Q96LL3 132 aa7.92□□□□□ -1.14
CLSTN1-203ENST00000435891 IGHV1-69DA0A0B4J2H0 117 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 IGHV1-69P01742 117 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 SRSF9Q13242 221 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 POLQO75417 2590 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 IGKV3-7A0A075B6H7 116 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 C9orf47Q6ZRZ4 202 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 MYO18BQ8IUG5 2567 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 IGLV2-18A0A075B6J9 118 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 BLCAPP62952 87 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 RRN3P1Q2M238 152 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 TMEM158Q8WZ71 300 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 TM2D2Q9BX73 214 aa7.91□□□□□ -1.14
CLSTN1-203ENST00000435891 DLX4Q92988 240 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-203ENST00000435891 PRORYQ9H606 182 aa7.9□□□□□ -1.14
CLSTN1-203ENST00000435891 F6UB75 175 aa7.9□□□□□ -1.14
CLSTN1-203ENST00000435891 HOXA3O43365 443 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-203ENST00000435891 EDN2P20800 178 aa7.9□□□□□ -1.14
CLSTN1-203ENST00000435891 ATP5J2P56134 94 aa7.9□□□□□ -1.14
CLSTN1-203ENST00000435891 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.14
CLSTN1-203ENST00000435891 DOPEY1Q5JWR5 2465 aa7.9□□□□□ -1.15
CLSTN1-203ENST00000435891 LINC01546A6NGU7 62 aa7.9□□□□□ -1.15
CLSTN1-203ENST00000435891 NRACQ8N912 160 aa7.9□□□□□ -1.15
CLSTN1-203ENST00000435891 CACNA1AO00555 2505 aa7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 IGKCP01834 107 aa7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 DOPEY2Q9Y3R5 2298 aa7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 MEIG1Q5JSS6 88 aa7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 PPDPFLQ8WWR9 84 aa7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 HHLA3Q9XRX5 114 aa7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 H3BUX3 64 aa7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 NFE4Q86UQ8 179 aa7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 NXT2Q9NPJ8 142 aaKnown RBP7.89□□□□□ -1.15
CLSTN1-203ENST00000435891 IGHV4-30-2A0A087WSY4 118 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 LINC01549A6NIU2 74 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 FAM223BA6NKX1 122 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 SPANXN1Q5VSR9 72 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 FAM223AQ8IWN6 122 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 ZFAND2AQ8N6M9 145 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 MRPL53Q96EL3 112 aaKnown RBP7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 ZFYVE26Q68DK2 2539 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 H7C2G1 150 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 FBN2P35556 2912 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 A8MWV9 139 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 SOCS3O14543 225 aa7.88□□□□□ -1.15
CLSTN1-203ENST00000435891 SRD5A1P18405 259 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms