RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 AGPAT4-IT1Q9H0P7 198 aa6.67□□□□□ -1.34
GABPB1-205ENST00000429662 PLXNB1O43157 2135 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 IGLV2-18A0A075B6J9 118 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 TRAV8-2A0A0B4J237 113 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 TRAV8-6A0A0B4J262 113 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 IGKV3D-20A0A0C4DH25 116 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 GAGE12BA1L429 117 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 K7EP34 96 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 SMIM13P0DJ93 91 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 SLC25A16P16260 332 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 HLA-DMBP28068 263 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 SAA4P35542 130 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 UFSP1Q6NVU6 142 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 C5orf56Q8N8D9 126 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 AJUBAQ96IF1 538 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 MOB4Q9Y3A3 225 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 CMYA5Q8N3K9 4069 aa6.66□□□□□ -1.34
GABPB1-205ENST00000429662 TRAV12-1A0A0B4J245 112 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 TRAV41A0A0B4J266 112 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 A0A0G2JLM5 398 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 PRAC2D3DTV9 90 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 PLNP26678 52 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 NMUP48645 174 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 ORMDL2Q53FV1 153 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 SPANXN1Q5VSR9 72 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 SAMD13Q5VXD3 122 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 IGFL4Q6B9Z1 124 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 TMEM158Q8WZ71 300 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 USMG5Q96IX5 58 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 C16orf92Q96LL3 132 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 Q96MF0 132 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 C20orf78Q9BR46 151 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 BEX4Q9NWD9 120 aaPredicted RBP6.65□□□□□ -1.35
GABPB1-205ENST00000429662 MSRB1Q9NZV6 116 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 DKK2Q9UBU2 259 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 TP73-AS1Q9UF72 201 aa6.65□□□□□ -1.35
GABPB1-205ENST00000429662 A0A087WX48 190 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 TRAV21A0A0B4J279 112 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 IGHV7-4-1A0A0J9YVY3 117 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 LINC01619G3V211 115 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 M0R381 172 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 NDUFA4O00483 81 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 SMIM17P0DL12 118 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 FABP2P12104 132 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 LMO4P61968 165 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 C19orf54Q5BKX5 351 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 NRACQ8N912 160 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 OR10J6PQ8NGY7 276 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 GLMPQ8WWB7 406 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 HHLA3Q9XRX5 114 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 VWFP04275 2813 aa6.64□□□□□ -1.35
GABPB1-205ENST00000429662 A0A1W2PPM0 123 aa6.63□□□□□ -1.35
GABPB1-205ENST00000429662 LRRC75A-AS1Q8N1F1 130 aa6.63□□□□□ -1.35
GABPB1-205ENST00000429662 RNF182Q8N6D2 247 aa6.63□□□□□ -1.35
GABPB1-205ENST00000429662 C18orf15Q96N68 181 aa6.63□□□□□ -1.35
GABPB1-205ENST00000429662 TM2D2Q9BX73 214 aa6.63□□□□□ -1.35
GABPB1-205ENST00000429662 MEGF9Q9H1U4 602 aa6.63□□□□□ -1.35
GABPB1-205ENST00000429662 ROS1P08922 2347 aa6.63□□□□□ -1.35
GABPB1-205ENST00000429662 IGHV3-35A0A0C4DH35 117 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 G3V318 75 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.62□□□□□ -1.35
GABPB1-205ENST00000429662 H3BUT2 72 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 H7C1H1 209 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 IGF1P05019 195 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 ARL3P36405 182 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 FXYD7P58549 80 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 COTL1Q14019 142 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 PCP2Q8IVA1 136 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 APRG1Q8IVJ8 170 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 CHAC1Q9BUX1 264 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 SMIM2Q9BVW6 85 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 DPH3P1Q9H4G8 78 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 UBTD1Q9HAC8 227 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 C11orf21Q9P2W6 132 aa6.62□□□□□ -1.35
GABPB1-205ENST00000429662 IGHV1-69DA0A0B4J2H0 117 aa6.61□□□□□ -1.35
GABPB1-205ENST00000429662 IGHV1-69P01742 117 aa6.61□□□□□ -1.35
GABPB1-205ENST00000429662 TRGV3P03979 118 aa6.61□□□□□ -1.35
GABPB1-205ENST00000429662 PRB4P10163 310 aaPredicted RBP6.61□□□□□ -1.35
GABPB1-205ENST00000429662 PPIFP30405 207 aaKnown RBP6.61□□□□□ -1.35
GABPB1-205ENST00000429662 ASIPP42127 132 aa6.61□□□□□ -1.35
GABPB1-205ENST00000429662 RPL32P62910 135 aaKnown RBP6.61□□□□□ -1.35
GABPB1-205ENST00000429662 RNF151Q2KHN1 245 aa6.61□□□□□ -1.35
GABPB1-205ENST00000429662 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
GABPB1-205ENST00000429662 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
GABPB1-205ENST00000429662 SPCS1Q9Y6A9 102 aa6.61□□□□□ -1.35
GABPB1-205ENST00000429662 TRBV25-1A0A075B6N4 114 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 IGHV3OR16-8A0A075B7F1 116 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 IGHV3-66A0A0C4DH42 116 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 F8VRH5 84 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 NDUFS8O00217 210 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 GCSHP23434 173 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 S100A4P26447 101 aaKnown RBP6.6□□□□□ -1.35
GABPB1-205ENST00000429662 ERASQ7Z444 233 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 WFDC3Q8IUB2 231 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 CEND1Q8N111 149 aa6.6□□□□□ -1.35
GABPB1-205ENST00000429662 POM121L12Q8N7R1 296 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms