RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 A8MWV9 139 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 PAX4O43316 350 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 NUDT3O95989 172 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 MGST1P10620 155 aaKnown RBP6.33□□□□□ -1.4
SMC1A-203ENST00000428014 ZNF80P51504 273 aaPredicted RBP6.33□□□□□ -1.4
SMC1A-203ENST00000428014 BLOC1S1P78537 153 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 MUC21Q5SSG8 566 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 FAM162BQ5T6X4 162 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 NEGR1Q7Z3B1 354 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 PRNTQ86SH4 94 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 FAM213BQ8TBF2 198 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 SCRT2Q9NQ03 307 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 RPH3ALQ9UNE2 315 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 LINC00588Q9Y4M8 146 aa6.33□□□□□ -1.4
SMC1A-203ENST00000428014 IGKV3D-20A0A0C4DH25 116 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 RHODO00212 210 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 RS1O15537 224 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 PDE6DO43924 150 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 PAGE4O60829 102 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 EIF3GO75821 320 aaKnown RBP eCLIP6.32□□□□□ -1.4
SMC1A-203ENST00000428014 IFNA1P01562 189 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 RNASE3P12724 160 aaKnown RBP6.32□□□□□ -1.4
SMC1A-203ENST00000428014 GATA1P15976 413 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-203ENST00000428014 FGF8P55075 233 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-203ENST00000428014 ZNF876PQ49A33 203 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 Q6ZQT7 251 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 OR4C5Q8NGB2 326 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 AP5S1Q9NUS5 200 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 C11orf21Q9P2W6 132 aa6.32□□□□□ -1.4
SMC1A-203ENST00000428014 TRGV4A0A0C4DH28 118 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 GNRH2O43555 120 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 PRB4P10163 310 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-203ENST00000428014 ASIPP42127 132 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 AKR1C3P42330 323 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 UBE2G2P60604 165 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 RAB14P61106 215 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 IFITM2Q01629 132 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 RHOHQ15669 191 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 C1orf134Q5TEV5 83 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 CST9LP1Q5W188 147 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 C8orf49Q96NF6 230 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 Q9H8V8 135 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 BIN3Q9NQY0 253 aa6.31□□□□□ -1.4
SMC1A-203ENST00000428014 MRPL16Q9NX20 251 aaKnown RBP6.31□□□□□ -1.4
SMC1A-203ENST00000428014 KRBOX1C9JBD0 128 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 CRIP1P50238 77 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 MEF2BQ02080 365 aaPredicted RBP6.3□□□□□ -1.4
SMC1A-203ENST00000428014 ESRGQ1W209 222 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 CFAP126Q5VTH2 177 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 SYT8Q8NBV8 401 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 PCNPQ8WW12 178 aaKnown RBP6.3□□□□□ -1.4
SMC1A-203ENST00000428014 ZC2HC1AQ96GY0 325 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 ZNF479Q96JC4 524 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 LINC00479Q96M42 142 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 PRADC1Q9BSG0 188 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 NAGKQ9UJ70 344 aa6.3□□□□□ -1.4
SMC1A-203ENST00000428014 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 B4DEV8 164 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 TMEM250H0YL14 139 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 K7EQD1 137 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 RTL8CO15255 209 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 NXPH4O95158 308 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 OR5AL1P0C617 328 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 S100A4P26447 101 aaKnown RBP6.29□□□□□ -1.4
SMC1A-203ENST00000428014 SRIP30626 198 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 CCL20P78556 96 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 ZNF506Q5JVG8 444 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 CLLU1Q5K131 121 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 UFSP1Q6NVU6 142 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 C6orf223Q8N319 242 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 C10orf126Q8N4M7 172 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 SGK494Q96LW2 274 aa6.29□□□□□ -1.4
SMC1A-203ENST00000428014 TRAV9-2A0A087WT02 112 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 TRAV34A0A0B4J273 112 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 A0A0J9YY99 117 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 TRBV10-1A0A0K0K1A3 114 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 SIVA1O15304 175 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 SNAI2O43623 268 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 SH2D1AO60880 128 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 DNAH10OSP0CZ25 163 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 BCL2P10415 239 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 XP32Q5T750 250 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 LYPD5Q6UWN5 251 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 NFE4Q86UQ8 179 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 ZNF575Q86XF7 245 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 BAGE2Q86Y30 109 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 ZFP82Q8N141 532 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 FRAS1Q86XX4 4008 aa6.28□□□□□ -1.4
SMC1A-203ENST00000428014 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
SMC1A-203ENST00000428014 A0A087WWC5 75 aa6.27□□□□□ -1.41
SMC1A-203ENST00000428014 PGPEP1LA6NFU8 196 aa6.27□□□□□ -1.41
SMC1A-203ENST00000428014 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
SMC1A-203ENST00000428014 RPL35P42766 123 aaKnown RBP6.27□□□□□ -1.41
SMC1A-203ENST00000428014 RPS20P60866 119 aaKnown RBP6.27□□□□□ -1.41
SMC1A-203ENST00000428014 WDR73Q6P4I2 378 aa6.27□□□□□ -1.41
SMC1A-203ENST00000428014 SFRP2Q96HF1 295 aa6.27□□□□□ -1.41
SMC1A-203ENST00000428014 PARLQ9H300 379 aa6.27□□□□□ -1.41
SMC1A-203ENST00000428014 HECTD4Q9Y4D8 3996 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms