RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 CRXO43186 299 aaPredicted RBP11.27□□□□□ -0.61
CALD1-206ENST00000424922 VAMP3Q15836 100 aa11.27□□□□□ -0.61
CALD1-206ENST00000424922 WFDC3Q8IUB2 231 aa11.27□□□□□ -0.61
CALD1-206ENST00000424922 MRPS16Q9Y3D3 137 aaKnown RBP11.27□□□□□ -0.61
CALD1-206ENST00000424922 OVOL1O14753 267 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 HNRNPA3P51991 378 aaKnown RBP11.26□□□□□ -0.61
CALD1-206ENST00000424922 SPATA45Q537H7 98 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 PRR31Q5SQ13 230 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 TMEM70Q9BUB7 260 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 PRAC2D3DTV9 90 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 G3V4G9 280 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 CRYBA4P53673 196 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 FAM104BQ5XKR9 115 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 TPPP3Q9BW30 176 aa11.26□□□□□ -0.61
CALD1-206ENST00000424922 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
CALD1-206ENST00000424922 KRTAP24-1Q3LI83 254 aa11.25□□□□□ -0.61
CALD1-206ENST00000424922 DYNLRB2Q8TF09 96 aa11.25□□□□□ -0.61
CALD1-206ENST00000424922 CNFNQ9BYD5 112 aa11.25□□□□□ -0.61
CALD1-206ENST00000424922 LEPROTL1O95214 131 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
CALD1-206ENST00000424922 ERCC8Q13216 396 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 C9orf47Q6ZRZ4 202 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 PRIMA1Q86XR5 153 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 ZNF138P52744 262 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 CITED1Q99966 193 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 SPXQ9BT56 116 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 AGPAT4-IT1Q9H0P7 198 aa11.24□□□□□ -0.61
CALD1-206ENST00000424922 TRAV9-2A0A087WT02 112 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 AGRNO00468 2067 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 SYS1-DBNDD2H3BUS1 97 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 PF4P02776 101 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 IGLC3P0DOY3 106 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 ID1P41134 155 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 DEFB114Q30KQ6 69 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 SHISA2Q6UWI4 295 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 HSPB8Q9UJY1 196 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 LENEPQ9Y5L5 61 aa11.23□□□□□ -0.61
CALD1-206ENST00000424922 ORM1P02763 201 aa11.22□□□□□ -0.61
CALD1-206ENST00000424922 TMEM61Q8N0U2 210 aa11.22□□□□□ -0.61
CALD1-206ENST00000424922 ORMDL3Q8N138 153 aa11.22□□□□□ -0.61
CALD1-206ENST00000424922 TMEM191AQ9H0A3 160 aa11.22□□□□□ -0.61
CALD1-206ENST00000424922 AP5S1Q9NUS5 200 aa11.22□□□□□ -0.61
CALD1-206ENST00000424922 VWFP04275 2813 aa11.22□□□□□ -0.61
CALD1-206ENST00000424922 TRAV26-1A0A087WT03 109 aa11.21□□□□□ -0.61
CALD1-206ENST00000424922 K7EQG2 157 aa11.21□□□□□ -0.61
CALD1-206ENST00000424922 DEFB1P60022 68 aa11.21□□□□□ -0.61
CALD1-206ENST00000424922 FA2HQ7L5A8 372 aa11.21□□□□□ -0.61
CALD1-206ENST00000424922 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.61
CALD1-206ENST00000424922 CD300EQ496F6 205 aaPredicted RBP11.21□□□□□ -0.62
CALD1-206ENST00000424922 MRPL51Q4U2R6 128 aaKnown RBP11.21□□□□□ -0.62
CALD1-206ENST00000424922 AMN1Q8IY45 258 aa11.21□□□□□ -0.62
CALD1-206ENST00000424922 PRSS3P2Q8NHM4 247 aa11.21□□□□□ -0.62
CALD1-206ENST00000424922 PRELID3AQ96N28 172 aa11.21□□□□□ -0.62
CALD1-206ENST00000424922 GAGE12BA1L429 117 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 D6R8Y8 96 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 ZNF688P0C7X2 276 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 TWIST1Q15672 202 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 Q6ZN92 141 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 MAP1LC3CQ9BXW4 147 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 SIGLEC8Q9NYZ4 499 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 STAB1Q9NY15 2570 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 SAP30O75446 220 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 SNRPD3P62318 126 aaKnown RBP11.2□□□□□ -0.62
CALD1-206ENST00000424922 SPATA12Q7Z6I5 190 aa11.2□□□□□ -0.62
CALD1-206ENST00000424922 NOTCH3Q9UM47 2321 aa11.19□□□□□ -0.62
CALD1-206ENST00000424922 F6UB75 175 aa11.19□□□□□ -0.62
CALD1-206ENST00000424922 PSMG4Q5JS54 123 aa11.19□□□□□ -0.62
CALD1-206ENST00000424922 OR10AG1Q8NH19 301 aa11.19□□□□□ -0.62
CALD1-206ENST00000424922 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 LINC00482Q8N8I6 264 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 FAM110AQ9BQ89 295 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 OR4C46A6NHA9 309 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 ATOH7Q8N100 152 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
CALD1-206ENST00000424922 CKS1BP61024 79 aa11.17□□□□□ -0.62
CALD1-206ENST00000424922 OR8A1Q8NGG7 326 aa11.17□□□□□ -0.62
CALD1-206ENST00000424922 CKS2P33552 79 aa11.17□□□□□ -0.62
CALD1-206ENST00000424922 IFI27P40305 119 aaPredicted RBP11.17□□□□□ -0.62
CALD1-206ENST00000424922 RNF185Q96GF1 192 aa11.17□□□□□ -0.62
CALD1-206ENST00000424922 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
CALD1-206ENST00000424922 ST20Q9HBF5 79 aa11.17□□□□□ -0.62
CALD1-206ENST00000424922 C11orf21Q9P2W6 132 aa11.17□□□□□ -0.62
CALD1-206ENST00000424922 COL6A5A8TX70 2615 aa11.16□□□□□ -0.62
CALD1-206ENST00000424922 IGLL1P15814 213 aa11.16□□□□□ -0.62
CALD1-206ENST00000424922 LINC01545Q5VT33 79 aa11.16□□□□□ -0.62
CALD1-206ENST00000424922 SIGMAR1Q99720 223 aa11.16□□□□□ -0.62
CALD1-206ENST00000424922 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.62
CALD1-206ENST00000424922 TRAV2A0A0B4J234 112 aa11.15□□□□□ -0.62
CALD1-206ENST00000424922 TRAV25A0A0B4J276 109 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 465.4 ms