RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 A0A0J9YY99 117 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 DLX1P56177 255 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 EBI3Q14213 229 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 PCOLCEQ15113 449 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 C20orf197Q8N268 126 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 ZNRF1Q8ND25 227 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 FOXA2Q9Y261 457 aaPredicted RBP5.28□□□□□ -1.56
CNOT4-205ENST00000423368 SIT1Q9Y3P8 196 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 EGR2P11161 476 aaPredicted RBP5.28□□□□□ -1.56
CNOT4-205ENST00000423368 UBE2E1P51965 193 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 TSPEAR-AS2P59090 65 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 LAGE3Q14657 143 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 DAND5Q8N907 189 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 DEFB108BQ8NET1 73 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 RITA1Q96K30 269 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 DEFB126Q9BYW3 111 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 LINC00271P0C7V0 271 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
CNOT4-205ENST00000423368 FAM201AQ5SY85 155 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 NUP37Q8NFH4 326 aa5.28□□□□□ -1.56
CNOT4-205ENST00000423368 ZNF625Q96I27 306 aaPredicted RBP5.28□□□□□ -1.56
CNOT4-205ENST00000423368 IGHV3-72A0A0B4J1Y9 119 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 TRBV7-7A0A0K0K1E9 115 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 OVOL3O00110 214 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 IGLV2-11P01706 119 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 C22orf34Q6ZV56 151 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 TMEM243Q9BU79 118 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 ZNF580Q9UK33 172 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 PIEZO2Q9H5I5 2752 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 J3QT63 122 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 IGHV3-30P01768 117 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 IGHV3-30-5P0DP03 117 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 FHL2Q14192 279 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 SOSTDC1Q6X4U4 206 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 SHANK2-AS3Q9BTD1 123 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 OTORQ9NRC9 128 aa5.27□□□□□ -1.57
CNOT4-205ENST00000423368 C11orf86A6NJI1 115 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 SHISA9B4DS77 424 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 SAA2P0DJI9 122 aaPredicted RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 ERHP84090 104 aaKnown RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 DEFB133Q30KQ1 61 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 ACACAQ13085 2346 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 TNRC6BQ9UPQ9 1833 aaKnown RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 IGHV1OR21-1A0A087WYE8 117 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 MRPL33O75394 65 aaKnown RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 NXPH4O95158 308 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 CCL3P10147 92 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 CRYGAP11844 174 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 TMEM258P61165 79 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 EIF4EBP1Q13541 118 aaPredicted RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 LY6DQ14210 128 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 AGPAT4-IT1Q9H0P7 198 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 ASH1LQ9NR48 2969 aaKnown RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 A0A087WWL8 130 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 TRBV6-6A0A0A6YYG2 114 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 SAA1P0DJI8 122 aaPredicted RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 LGALS3P17931 250 aaKnown RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 HOXD3P31249 432 aaPredicted RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 MAGEA5P43359 124 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 ZNF80P51504 273 aaPredicted RBP5.26□□□□□ -1.57
CNOT4-205ENST00000423368 DEFB103AP81534 67 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 C9orf85Q96MD7 179 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 TMEM14BQ9NUH8 114 aa5.26□□□□□ -1.57
CNOT4-205ENST00000423368 DSCAMO60469 2012 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 IGKV3D-11A0A0A0MRZ8 115 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 DAZ4Q86SG3 579 aaKnown RBP5.25□□□□□ -1.57
CNOT4-205ENST00000423368 NEXN-AS1Q8NBZ9 246 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 RNF185Q96GF1 192 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 DAZ1Q9NQZ3 744 aaKnown RBP5.25□□□□□ -1.57
CNOT4-205ENST00000423368 COL4A6Q14031 1691 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 TRAV23DV6A0A075B6W5 121 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 IGHV3OR16-13A0A075B7E8 117 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 IGHV3-74A0A0B4J1X5 117 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 C15orf65H3BRN8 121 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 M0R1W7 72 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 MGPP08493 103 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 WT1-ASQ06250 92 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 OPRPNQ99935 248 aaPredicted RBP5.25□□□□□ -1.57
CNOT4-205ENST00000423368 U3KQE9 123 aa5.25□□□□□ -1.57
CNOT4-205ENST00000423368 CRYGDP07320 174 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 HILS1P60008 231 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 C17orf82Q86X59 251 aaPredicted RBP5.24□□□□□ -1.57
CNOT4-205ENST00000423368 RPL39LQ96EH5 51 aaKnown RBP5.24□□□□□ -1.57
CNOT4-205ENST00000423368 TRIOBPQ9H2D6 2365 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 IGKV1D-37A0A075B6S9 117 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 TRBV7-1A0A0A6YYK4 115 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 A0A0G2JNJ9 132 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 TMEM178BH3BS89 294 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 M0R381 172 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 COX6CP09669 75 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 PRCDQ00LT1 54 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 CFHR1Q03591 330 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 Q6ZSR3 168 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 Q9UFV3 132 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 SNURFQ9Y675 71 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 TRGV8A0A0C4DH27 118 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 ATOX1O00244 68 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 GP9P14770 177 aa5.24□□□□□ -1.57
CNOT4-205ENST00000423368 RPL39P62891 51 aaKnown RBP5.24□□□□□ -1.57
CNOT4-205ENST00000423368 SPANXN1Q5VSR9 72 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms