RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 SUMO2P61956 95 aaKnown RBP12.63□□□□□ -0.39
GRAMD1A-202ENST00000411896 TRBV25-1A0A075B6N4 114 aa12.62□□□□□ -0.39
GRAMD1A-202ENST00000411896 A0A1B0GV72 72 aa12.62□□□□□ -0.39
GRAMD1A-202ENST00000411896 RNASE3P12724 160 aaKnown RBP12.62□□□□□ -0.39
GRAMD1A-202ENST00000411896 GCSHP23434 173 aa12.62□□□□□ -0.39
GRAMD1A-202ENST00000411896 MAPKAPK5-AS1Q8N8E1 139 aa12.62□□□□□ -0.39
GRAMD1A-202ENST00000411896 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
GRAMD1A-202ENST00000411896 MED14OSP0DP75 135 aa12.62□□□□□ -0.39
GRAMD1A-202ENST00000411896 SCGB2A2Q13296 93 aa12.61□□□□□ -0.39
GRAMD1A-202ENST00000411896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.61□□□□□ -0.39
GRAMD1A-202ENST00000411896 HLA-DRB4P13762 266 aa12.61□□□□□ -0.39
GRAMD1A-202ENST00000411896 C20orf78Q9BR46 151 aa12.61□□□□□ -0.39
GRAMD1A-202ENST00000411896 HLA-DRB4X5D2U9 266 aa12.61□□□□□ -0.39
GRAMD1A-202ENST00000411896 K7EP34 96 aa12.6□□□□□ -0.39
GRAMD1A-202ENST00000411896 ORMDL2Q53FV1 153 aa12.6□□□□□ -0.39
GRAMD1A-202ENST00000411896 TOMM6Q96B49 74 aa12.6□□□□□ -0.39
GRAMD1A-202ENST00000411896 SCGB3A1Q96QR1 104 aa12.6□□□□□ -0.39
GRAMD1A-202ENST00000411896 GTF2H5Q6ZYL4 71 aa12.59□□□□□ -0.39
GRAMD1A-202ENST00000411896 TRAV12-1A0A0B4J245 112 aa12.59□□□□□ -0.39
GRAMD1A-202ENST00000411896 TRBV7-9A0A0J9YWB2 115 aa12.59□□□□□ -0.39
GRAMD1A-202ENST00000411896 A0A1W2PPM0 123 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 H7C1H1 209 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 K7ERJ3 54 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 PLNP26678 52 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 NRGNQ92686 78 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 KLLNB2CW77 178 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 F8VRH5 84 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 SMIM13P0DJ93 91 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 C10orf99Q6UWK7 81 aa12.58□□□□□ -0.4
GRAMD1A-202ENST00000411896 NXPH4O95158 308 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 SLC25A16P16260 332 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 DCANP1Q8TF63 244 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 COL12A1Q99715 3063 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 K7EMT4 169 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 LINC00315P59091 139 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 NEGR1Q7Z3B1 354 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 NEXN-AS1Q8NBZ9 246 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
GRAMD1A-202ENST00000411896 B4DSR2 109 aa12.56□□□□□ -0.4
GRAMD1A-202ENST00000411896 K7EMI3 77 aa12.56□□□□□ -0.4
GRAMD1A-202ENST00000411896 IGHV4-59P01825 116 aa12.56□□□□□ -0.4
GRAMD1A-202ENST00000411896 C2orf66Q6UXQ4 117 aa12.56□□□□□ -0.4
GRAMD1A-202ENST00000411896 CEND1Q8N111 149 aa12.56□□□□□ -0.4
GRAMD1A-202ENST00000411896 POM121L12Q8N7R1 296 aa12.56□□□□□ -0.4
GRAMD1A-202ENST00000411896 JPT2Q9H910 190 aa12.56□□□□□ -0.4
GRAMD1A-202ENST00000411896 PKD1L2Q7Z442 2459 aa12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 PSMB8P28062 276 aa12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 DEFB112Q30KQ8 113 aa12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 BAALCQ8WXS3 180 aa12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 TM2D2Q9BX73 214 aa12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 SPCS1Q9Y6A9 102 aa12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 MUC4Q99102 2169 aa12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 ID1P41134 155 aa12.55□□□□□ -0.4
GRAMD1A-202ENST00000411896 SAMD5Q5TGI4 173 aa12.54□□□□□ -0.4
GRAMD1A-202ENST00000411896 TRAV12-3A0A0B4J271 114 aa12.54□□□□□ -0.4
GRAMD1A-202ENST00000411896 FAM159AQ6UWV7 190 aa12.54□□□□□ -0.4
GRAMD1A-202ENST00000411896 NHP2Q9NX24 153 aaKnown RBP12.54□□□□□ -0.4
GRAMD1A-202ENST00000411896 FABP2P12104 132 aa12.53□□□□□ -0.4
GRAMD1A-202ENST00000411896 DEFB104AQ8WTQ1 72 aa12.53□□□□□ -0.4
GRAMD1A-202ENST00000411896 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
GRAMD1A-202ENST00000411896 SPG11Q96JI7 2443 aa12.52□□□□□ -0.4
GRAMD1A-202ENST00000411896 PRSS29PA6NIE9 313 aa12.52□□□□□ -0.4
GRAMD1A-202ENST00000411896 ZNF688P0C7X2 276 aa12.52□□□□□ -0.4
GRAMD1A-202ENST00000411896 AZU1P20160 251 aa12.52□□□□□ -0.4
GRAMD1A-202ENST00000411896 SUMO4Q6EEV6 95 aa12.52□□□□□ -0.41
GRAMD1A-202ENST00000411896 CFAP46Q8IYW2 2715 aa12.52□□□□□ -0.41
GRAMD1A-202ENST00000411896 A0A087WWL8 130 aa12.51□□□□□ -0.41
GRAMD1A-202ENST00000411896 DUSP14O95147 198 aaKnown RBP12.51□□□□□ -0.41
GRAMD1A-202ENST00000411896 PPP1R17O96001 155 aa12.51□□□□□ -0.41
GRAMD1A-202ENST00000411896 CD7P09564 240 aa12.51□□□□□ -0.41
GRAMD1A-202ENST00000411896 CELSR2Q9HCU4 2923 aa12.51□□□□□ -0.41
GRAMD1A-202ENST00000411896 IGHV4OR15-8A0A075B7B6 117 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 A0A087WW49 117 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 OR11H12B2RN74 326 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 IGKV3-20P01619 116 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 OR11H1Q8NG94 326 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 OR5A1Q8NGJ0 315 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 OR11H2Q8NH07 326 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 MYMXA0A1B0GTQ4 84 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 GATA3P23771 443 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 TAL2Q16559 108 aa12.5□□□□□ -0.41
GRAMD1A-202ENST00000411896 TRBV7-3A0A075B6L6 115 aa12.49□□□□□ -0.41
GRAMD1A-202ENST00000411896 TRAV12-2A0A075B6T6 113 aa12.49□□□□□ -0.41
GRAMD1A-202ENST00000411896 TSHBP01222 138 aa12.49□□□□□ -0.41
GRAMD1A-202ENST00000411896 SIGMAR1Q99720 223 aa12.49□□□□□ -0.41
GRAMD1A-202ENST00000411896 POLR2KP53803 58 aaKnown RBP12.49□□□□□ -0.41
GRAMD1A-202ENST00000411896 HIST1H4GQ99525 98 aa12.49□□□□□ -0.41
GRAMD1A-202ENST00000411896 A0A0J9YX75 114 aa12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 CRYGDP07320 174 aa12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 RPL32P62910 135 aaKnown RBP12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 SMAGPQ0VAQ4 97 aa12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 LINC01356Q8N9X3 169 aa12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 MAPK1IP1LQ8NDC0 245 aa12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 TP53TG1Q9Y2A0 90 aa12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 MAP1AP78559 2803 aaPredicted RBP12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.48□□□□□ -0.417e-7■■■■□ 21
GRAMD1A-202ENST00000411896 IGHV3-16A0A0C4DH30 117 aa12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 CRYBA4P53673 196 aa12.48□□□□□ -0.41
GRAMD1A-202ENST00000411896 DSCR9P59020 149 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms