RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 CACNA1HO95180 2353 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 AGRNO00468 2067 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 TRAV21A0A0B4J279 112 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 TRAV40A0A0B4J280 105 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 IGKV3D-20A0A0C4DH25 116 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 IGHV7-4-1A0A0J9YVY3 117 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 FAM223BA6NKX1 122 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 TMEM262E9PQX1 116 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 K7ERJ3 54 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 OVOL1O14753 267 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 KLK10O43240 276 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 NXPH4O95158 308 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 BRI3O95415 125 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 APOMO95445 188 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 UBE2D1P51668 147 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 SCGB2A2Q13296 93 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 HES1Q14469 280 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 C15orf32Q32M92 178 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 SPANXN1Q5VSR9 72 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 Q71RC1 249 aaPredicted RBP2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 VMO1Q7Z5L0 202 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 GTSCR1Q86UQ5 136 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 FAM223AQ8IWN6 122 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 DYNAPQ8N1N2 210 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 DEFB123Q8N688 67 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 POM121L12Q8N7R1 296 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 DEFB124Q8NES8 71 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 SVIPQ8NHG7 77 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 Q8TAT8 98 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 PPDPFLQ8WWR9 84 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 TMEM141Q96I45 108 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 LINC00477Q96M19 166 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 SCGB3A1Q96QR1 104 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 TIMM17AQ99595 171 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 DPH3P1Q9H4G8 78 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 TMEM160Q9NX00 188 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 CYSLTR1Q9Y271 337 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 TSSC4Q9Y5U2 329 aaPredicted RBP2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 SMAD5-AS1Q9Y6J3 95 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 ROS1P08922 2347 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 POLEQ07864 2286 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 CEP250Q9BV73 2442 aa2.66□□□□□ -1.98
RNU6-55P-201ENST00000411092 MAP1BP46821 2468 aaKnown RBP2.65□□□□□ -1.98
RNU6-55P-201ENST00000411092 TPRP12270 2363 aaKnown RBP2.65□□□□□ -1.98
RNU6-55P-201ENST00000411092 IGHV4OR15-8A0A075B7B6 117 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 A0A087WW49 117 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 IGHV7-81A0A0B4J1V7 117 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 SPAARA0A1B0GVQ0 90 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 H3BUA1 57 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 LGALS1P09382 135 aaKnown RBP2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 ASIPP42127 132 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 UBE2E1P51965 193 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 CRIP2P52943 208 aaPredicted RBP2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 UBE2D3P61077 147 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 UBE2D2P62837 147 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 NDPQ00604 133 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 SMAGPQ0VAQ4 97 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 ERCC8Q13216 396 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 ETDBQ3ZM63 59 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 CFAP126Q5VTH2 177 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 DGAT2L7PQ6IED9 249 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 TEN1Q86WV5 123 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 APRG1Q8IVJ8 170 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 SBSPONQ8IVN8 264 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 Q8N9W7 124 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 OR10J6PQ8NGY7 276 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 ZNF418Q8TF45 676 aaPredicted RBP2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 ITLN2Q8WWU7 325 aaPredicted RBP2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 LINC01600Q96MT4 127 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 NAA38Q9BRA0 125 aaKnown RBP2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 AGPAT4-IT1Q9H0P7 198 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 GTSF1LQ9H1H1 148 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 UFC1Q9Y3C8 167 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 VCANP13611 3396 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 BDP1A6H8Y1 2624 aa2.65□□□□□ -1.99
RNU6-55P-201ENST00000411092 IGLV5-37A0A075B6J1 123 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 TRAV8-2A0A0B4J237 113 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 A0A0J9YX75 114 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 TRBV6-5A0A0K0K1A5 114 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 CLPSL1A2RUU4 121 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 C11orf86A6NJI1 115 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 ZNF815PA8K554 130 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 PRAC2D3DTV9 90 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 H3BVH4 76 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 NDUFA4O00483 81 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 IGHV1-69P01742 117 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 TRGV3P03979 118 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 CD7P09564 240 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 COX6B1P14854 86 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 HLA-DMBP28068 263 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 CRYBA4P53673 196 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 FXYD7P58549 80 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 CKS1BP61024 79 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 ATP5G2Q06055 141 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 SRSF9Q13242 221 aaKnown RBP eCLIP2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 WFDC2Q14508 124 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 PMVKQ15126 192 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 RHOHQ15669 191 aa2.64□□□□□ -1.99
RNU6-55P-201ENST00000411092 MORN3Q6PF18 240 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms