RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 IGHV4-4A0A075B6R2 117 aa15.41■□□□□ 0.06
TPM1-208ENST00000404484 NDUFA6P56556 154 aa15.41■□□□□ 0.06
TPM1-208ENST00000404484 SPANXN1Q5VSR9 72 aa15.41■□□□□ 0.06
TPM1-208ENST00000404484 GNRH2O43555 120 aa15.4■□□□□ 0.06
TPM1-208ENST00000404484 SMIM15Q7Z3B0 74 aa15.4■□□□□ 0.06
TPM1-208ENST00000404484 SCRT2Q9NQ03 307 aa15.4■□□□□ 0.06
TPM1-208ENST00000404484 PHLDA3Q9Y5J5 127 aa15.4■□□□□ 0.06
TPM1-208ENST00000404484 MUC21A0A0G2JKD1 596 aa15.39■□□□□ 0.05
TPM1-208ENST00000404484 MUC21A0A140T8X8 626 aa15.39■□□□□ 0.05
TPM1-208ENST00000404484 KRTAP10-11P60412 298 aa15.39■□□□□ 0.05
TPM1-208ENST00000404484 MORN3Q6PF18 240 aaPredicted RBP15.39■□□□□ 0.05
TPM1-208ENST00000404484 OR10AG1Q8NH19 301 aa15.39■□□□□ 0.05
TPM1-208ENST00000404484 LINC00467Q9BRT7 94 aa15.39■□□□□ 0.05
TPM1-208ENST00000404484 TMEM191AQ9H0A3 160 aa15.39■□□□□ 0.05
TPM1-208ENST00000404484 C5orf52A6NGY3 159 aa15.38■□□□□ 0.05
TPM1-208ENST00000404484 SSTP61278 116 aa15.38■□□□□ 0.05
TPM1-208ENST00000404484 SNRPEP62304 92 aaKnown RBP15.38■□□□□ 0.05
TPM1-208ENST00000404484 TMEM256Q8N2U0 113 aa15.38■□□□□ 0.05
TPM1-208ENST00000404484 TIMM8BQ9Y5J9 83 aaPredicted RBP15.38■□□□□ 0.05
TPM1-208ENST00000404484 LOC102724200A0A096LPH7 203 aaPredicted RBP15.37■□□□□ 0.05
TPM1-208ENST00000404484 RNASE3P12724 160 aaKnown RBP15.37■□□□□ 0.05
TPM1-208ENST00000404484 EGFEM1PQ0D2K5 195 aa15.37■□□□□ 0.05
TPM1-208ENST00000404484 KIAA1644Q3SXP7 199 aa15.37■□□□□ 0.05
TPM1-208ENST00000404484 C1QTNF4Q9BXJ3 329 aa15.37■□□□□ 0.05
TPM1-208ENST00000404484 IGHV3-16A0A0C4DH30 117 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 SRIP30626 198 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 COA6Q5JTJ3 125 aaKnown RBP15.36■□□□□ 0.05
TPM1-208ENST00000404484 Q8N1Y9 231 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 LOC105371267A0A1B0GV96 52 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 CBY3A6NI87 242 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 RBMY1A1P0DJD3 496 aaKnown RBP15.36■□□□□ 0.05
TPM1-208ENST00000404484 RBMY1CP0DJD4 496 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 RBMY1FQ15415 496 aaKnown RBP15.36■□□□□ 0.05
TPM1-208ENST00000404484 FAM104BQ5XKR9 115 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 WFDC10AQ9H1F0 79 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 XCL2Q9UBD3 114 aa15.36■□□□□ 0.05
TPM1-208ENST00000404484 TGP01266 2768 aa15.35■□□□□ 0.05
TPM1-208ENST00000404484 OR10J3Q5JRS4 329 aa15.35■□□□□ 0.05
TPM1-208ENST00000404484 DMRTA1Q5VZB9 504 aa15.35■□□□□ 0.05
TPM1-208ENST00000404484 LINC01587Q99440 93 aa15.35■□□□□ 0.05
TPM1-208ENST00000404484 UBE2CO00762 179 aa15.34■□□□□ 0.05
TPM1-208ENST00000404484 NXPH4O95158 308 aa15.34■□□□□ 0.05
TPM1-208ENST00000404484 Q0VG73 95 aa15.34■□□□□ 0.05
TPM1-208ENST00000404484 DEFB125Q8N687 156 aa15.34■□□□□ 0.05
TPM1-208ENST00000404484 C9orf85Q96MD7 179 aa15.34■□□□□ 0.05
TPM1-208ENST00000404484 TMEM208Q9BTX3 173 aa15.34■□□□□ 0.05
TPM1-208ENST00000404484 MSRB1Q9NZV6 116 aa15.34■□□□□ 0.05
TPM1-208ENST00000404484 M0R381 172 aa15.33■□□□□ 0.05
TPM1-208ENST00000404484 HOXA5P20719 270 aa15.33■□□□□ 0.05
TPM1-208ENST00000404484 SYT8Q8NBV8 401 aa15.33■□□□□ 0.05
TPM1-208ENST00000404484 ALKBH7Q9BT30 221 aaPredicted RBP15.33■□□□□ 0.05
TPM1-208ENST00000404484 RPL35AP18077 110 aaKnown RBP15.32■□□□□ 0.04
TPM1-208ENST00000404484 ZMAT5Q9UDW3 170 aaKnown RBP15.32■□□□□ 0.04
TPM1-208ENST00000404484 TP53TG3Q9ULZ0 132 aa15.32■□□□□ 0.04
TPM1-208ENST00000404484 GOLT1BQ9Y3E0 138 aa15.32■□□□□ 0.04
TPM1-208ENST00000404484 ZNF415Q09FC8 603 aa15.32■□□□□ 0.04
TPM1-208ENST00000404484 AMN1Q8IY45 258 aa15.32■□□□□ 0.04
TPM1-208ENST00000404484 AP1S3Q96PC3 154 aa15.32■□□□□ 0.04
TPM1-208ENST00000404484 BAGE3Q86Y29 109 aa15.31■□□□□ 0.04
TPM1-208ENST00000404484 MDFICQ9P1T7 246 aa15.31■□□□□ 0.04
TPM1-208ENST00000404484 PPBPP02775 128 aa15.3■□□□□ 0.04
TPM1-208ENST00000404484 HTN1P15515 57 aa15.29■□□□□ 0.04
TPM1-208ENST00000404484 MRPL51Q4U2R6 128 aaKnown RBP15.29■□□□□ 0.04
TPM1-208ENST00000404484 ORMDL3Q8N138 153 aa15.29■□□□□ 0.04
TPM1-208ENST00000404484 K7EIL1 84 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 EVI2AP22794 236 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 C1orf158Q8N1D5 194 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 C18orf32Q8TCD1 76 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 MRAPQ8TCY5 172 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 U3KQK5 164 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 GIG44P09565 113 aaPredicted RBP15.28■□□□□ 0.04
TPM1-208ENST00000404484 RAB4AP20338 218 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 S100A2P29034 98 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 CSTL1Q9H114 145 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 DPH3P1Q9H4G8 78 aa15.28■□□□□ 0.04
TPM1-208ENST00000404484 CKS2P33552 79 aa15.27■□□□□ 0.03
TPM1-208ENST00000404484 HIST3H2BBQ8N257 126 aa15.27■□□□□ 0.03
TPM1-208ENST00000404484 RNF185Q96GF1 192 aa15.27■□□□□ 0.03
TPM1-208ENST00000404484 SPXQ9BT56 116 aa15.27■□□□□ 0.03
TPM1-208ENST00000404484 D6R8Y8 96 aa15.26■□□□□ 0.03
TPM1-208ENST00000404484 SMIM17P0DL12 118 aa15.26■□□□□ 0.03
TPM1-208ENST00000404484 PIK3CD-AS1Q5SR53 167 aa15.26■□□□□ 0.03
TPM1-208ENST00000404484 LAMTOR2Q9Y2Q5 125 aa15.26■□□□□ 0.03
TPM1-208ENST00000404484 IGHV3OR16-12A0A075B7B8 117 aa15.25■□□□□ 0.03
TPM1-208ENST00000404484 PTH2Q96A98 100 aa15.25■□□□□ 0.03
TPM1-208ENST00000404484 PRELID3AQ96N28 172 aa15.25■□□□□ 0.03
TPM1-208ENST00000404484 RCHY1Q96PM5 261 aa15.25■□□□□ 0.03
TPM1-208ENST00000404484 SPRY2O43597 315 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 MRAP2Q96G30 205 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 KIR2DL5BA0A0G2JN68 375 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 KIR2DL5BA0A0G2JPC4 375 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 M0R2P5 195 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 SERF1AO75920 110 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 ESDP10768 282 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 ZNF876PQ49A33 203 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 KIR2DL5AQ8N109 375 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 KIR2DL5BQ8NHK3 375 aa15.24■□□□□ 0.03
TPM1-208ENST00000404484 MUC4Q99102 2169 aa15.23■□□□□ 0.03
TPM1-208ENST00000404484 APOC4P55056 127 aa15.23■□□□□ 0.03
TPM1-208ENST00000404484 DEFB121Q5J5C9 76 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms