RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 SPTBN4Q9H254 2564 aa8.62□□□□□ -1.03
C4orf3-201ENST00000399075 TGFAP01135 160 aa8.62□□□□□ -1.03
C4orf3-201ENST00000399075 SRSF1Q07955 248 aaKnown RBP eCLIP8.62□□□□□ -1.03
C4orf3-201ENST00000399075 K7EMI3 77 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 MSMBP08118 114 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 ASIPP42127 132 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 LY6EQ16553 131 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 MYOZ3Q8TDC0 251 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 ZNF418Q8TF45 676 aaPredicted RBP8.61□□□□□ -1.03
C4orf3-201ENST00000399075 SPAG8Q99932 426 aaPredicted RBP8.61□□□□□ -1.03
C4orf3-201ENST00000399075 FOXC2Q99958 501 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 SMIM2Q9BVW6 85 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 VPREB3Q9UKI3 123 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 ITPR1Q14643 2758 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 TRAV26-2A0A0B4J265 109 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 MT-ATP8P03928 68 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 TCTAP57738 103 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 CFHR3Q02985 330 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 C20orf78Q9BR46 151 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 ASH1LQ9NR48 2969 aaKnown RBP8.61□□□□□ -1.03
C4orf3-201ENST00000399075 WFDC2Q14508 124 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 ETDBQ3ZM63 59 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 KLK15Q9H2R5 256 aa8.61□□□□□ -1.03
C4orf3-201ENST00000399075 C9orf118A6NHY6 69 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 M0R381 172 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 SLC25A16P16260 332 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 C3orf56Q8N813 242 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 SPATA25Q9BR10 227 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 DPH3P1Q9H4G8 78 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 DAZ1Q9NQZ3 744 aaKnown RBP8.6□□□□□ -1.03
C4orf3-201ENST00000399075 IGHV4-30-2A0A087WSY4 118 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 K7EMT4 169 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 ORMDL2Q53FV1 153 aa8.6□□□□□ -1.03
C4orf3-201ENST00000399075 A0A087WX48 190 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 IGHV3-11P01762 117 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 RHPN1-AS1Q9BWJ2 59 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 NCOR2Q9Y618 2525 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 IGKV2D-26A0A0A0MRZ7 120 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 TRAV12-1A0A0B4J245 112 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 TMEM8BA6NDV4 472 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 J3QR89 54 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 NXPH4O95158 308 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 BLCAPP62952 87 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 CHD8Q9HCK8 2581 aa8.59□□□□□ -1.03
C4orf3-201ENST00000399075 S100A4P26447 101 aaKnown RBP8.58□□□□□ -1.04
C4orf3-201ENST00000399075 PLNP26678 52 aa8.58□□□□□ -1.04
C4orf3-201ENST00000399075 SUMO2P61956 95 aaKnown RBP8.58□□□□□ -1.04
C4orf3-201ENST00000399075 POM121L12Q8N7R1 296 aa8.58□□□□□ -1.04
C4orf3-201ENST00000399075 PHLDA3Q9Y5J5 127 aa8.58□□□□□ -1.04
C4orf3-201ENST00000399075 AKAP6Q13023 2319 aa8.58□□□□□ -1.04
C4orf3-201ENST00000399075 PPP1R17O96001 155 aa8.58□□□□□ -1.04
C4orf3-201ENST00000399075 RASL10AQ92737 203 aa8.58□□□□□ -1.04
C4orf3-201ENST00000399075 B4DSR2 109 aa8.58□□□□□ -1.04
C4orf3-201ENST00000399075 ZC2HC1BQ5TFG8 222 aa8.58□□□□□ -1.04
C4orf3-201ENST00000399075 MRPL35Q9NZE8 188 aaKnown RBP8.58□□□□□ -1.04
C4orf3-201ENST00000399075 CCDC179H3BU77 68 aa8.57□□□□□ -1.04
C4orf3-201ENST00000399075 RNASE4P34096 147 aaKnown RBP8.57□□□□□ -1.04
C4orf3-201ENST00000399075 DSCR9P59020 149 aa8.57□□□□□ -1.04
C4orf3-201ENST00000399075 RPL11P62913 178 aaKnown RBP8.57□□□□□ -1.04
C4orf3-201ENST00000399075 TM4SF20Q53R12 229 aa8.57□□□□□ -1.04
C4orf3-201ENST00000399075 TOMM6Q96B49 74 aa8.57□□□□□ -1.04
C4orf3-201ENST00000399075 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
C4orf3-201ENST00000399075 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
C4orf3-201ENST00000399075 KLLNB2CW77 178 aa8.57□□□□□ -1.04
C4orf3-201ENST00000399075 Q6ZS46 218 aa8.57□□□□□ -1.04
C4orf3-201ENST00000399075 TMEM89A2RUT3 159 aa8.56□□□□□ -1.04
C4orf3-201ENST00000399075 RNASE3P12724 160 aaKnown RBP8.56□□□□□ -1.04
C4orf3-201ENST00000399075 GTSCR1Q86UQ5 136 aa8.56□□□□□ -1.04
C4orf3-201ENST00000399075 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
C4orf3-201ENST00000399075 TMEM160Q9NX00 188 aa8.56□□□□□ -1.04
C4orf3-201ENST00000399075 TRBV25-1A0A075B6N4 114 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 RNF223E7ERA6 249 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 F6UB75 175 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 F8VRH5 84 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 H7C1H1 209 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 DEFB1P60022 68 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 C5orf47Q569G3 176 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 C14orf178Q8N769 122 aaPredicted RBP8.55□□□□□ -1.04
C4orf3-201ENST00000399075 A0A1W2PPM0 123 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 FABP2P12104 132 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 PSMB8P28062 276 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 OR5A1Q8NGJ0 315 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 DCANP1Q8TF63 244 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 SPANXB1Q9NS25 103 aaPredicted RBP8.55□□□□□ -1.04
C4orf3-201ENST00000399075 LCNL1Q6ZST4 164 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 ODF3Q96PU9 254 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 TM2D2Q9BX73 214 aa8.55□□□□□ -1.04
C4orf3-201ENST00000399075 AVPP01185 164 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 TAL2Q16559 108 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 SYT8Q8NBV8 401 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 CSDC2Q9Y534 153 aaKnown RBP8.54□□□□□ -1.04
C4orf3-201ENST00000399075 SVEP1Q4LDE5 3571 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 IGHV4OR15-8A0A075B7B6 117 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 A0A087WW49 117 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 GNRH2O43555 120 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 NEXN-AS1Q8NBZ9 246 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 RPL39LQ96EH5 51 aaKnown RBP8.54□□□□□ -1.04
C4orf3-201ENST00000399075 KIF25-AS1Q9Y6Z4 181 aa8.54□□□□□ -1.04
C4orf3-201ENST00000399075 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms