RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 S100A4P26447 101 aaKnown RBP15.61■□□□□ 0.09
CLK3-202ENST00000395066 RRN3P1Q2M238 152 aa15.61■□□□□ 0.09
CLK3-202ENST00000395066 SH2D6Q7Z4S9 175 aa15.61■□□□□ 0.09
CLK3-202ENST00000395066 MRAP2Q96G30 205 aa15.61■□□□□ 0.09
CLK3-202ENST00000395066 IGHV4-61A0A0C4DH41 118 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 MGPP08493 103 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 SMAGPQ0VAQ4 97 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 ANXA2RQ3ZCQ2 193 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 ETDBQ3ZM63 59 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 OR11H12B2RN74 326 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 BLCAPP62952 87 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 OR11H1Q8NG94 326 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 OR11H2Q8NH07 326 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 RASL10AQ92737 203 aa15.6■□□□□ 0.09
CLK3-202ENST00000395066 IGHV1-69DA0A0B4J2H0 117 aa15.59■□□□□ 0.09
CLK3-202ENST00000395066 MYMXA0A1B0GTQ4 84 aa15.59■□□□□ 0.09
CLK3-202ENST00000395066 FAM223BA6NKX1 122 aa15.59■□□□□ 0.09
CLK3-202ENST00000395066 IGHV1-69P01742 117 aa15.59■□□□□ 0.09
CLK3-202ENST00000395066 FAM223AQ8IWN6 122 aa15.59■□□□□ 0.09
CLK3-202ENST00000395066 CSPG4Q6UVK1 2322 aa15.59■□□□□ 0.09
CLK3-202ENST00000395066 GAGE13Q4V321 117 aa15.59■□□□□ 0.09
CLK3-202ENST00000395066 OR10J6PQ8NGY7 276 aa15.59■□□□□ 0.09
CLK3-202ENST00000395066 LINC01619G3V211 115 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 SPAG8Q99932 426 aaPredicted RBP15.58■□□□□ 0.08
CLK3-202ENST00000395066 UTP20O75691 2785 aaKnown RBP15.58■□□□□ 0.08
CLK3-202ENST00000395066 A0A1B0GWB2 263 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 SOCS3O14543 225 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 PF4V1P10720 104 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 GNLYP22749 145 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 MTURNQ8N3F0 131 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 SCGB3A1Q96QR1 104 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 SPOCK3Q9BQ16 436 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 PHLDA3Q9Y5J5 127 aa15.58■□□□□ 0.08
CLK3-202ENST00000395066 H3BUX3 64 aa15.57■□□□□ 0.08
CLK3-202ENST00000395066 ORMDL2Q53FV1 153 aa15.57■□□□□ 0.08
CLK3-202ENST00000395066 SUMO2P61956 95 aaKnown RBP15.56■□□□□ 0.08
CLK3-202ENST00000395066 TOMM6Q96B49 74 aa15.56■□□□□ 0.08
CLK3-202ENST00000395066 PRO0461Q9UI25 63 aa15.56■□□□□ 0.08
CLK3-202ENST00000395066 MUC4Q99102 2169 aa15.56■□□□□ 0.08
CLK3-202ENST00000395066 SPATA25Q9BR10 227 aa15.56■□□□□ 0.08
CLK3-202ENST00000395066 CYSLTR1Q9Y271 337 aa15.56■□□□□ 0.08
CLK3-202ENST00000395066 TRAV21A0A0B4J279 112 aa15.55■□□□□ 0.08
CLK3-202ENST00000395066 NEXN-AS1Q8NBZ9 246 aa15.55■□□□□ 0.08
CLK3-202ENST00000395066 LINC00477Q96M19 166 aa15.55■□□□□ 0.08
CLK3-202ENST00000395066 SLC25A16P16260 332 aa15.55■□□□□ 0.08
CLK3-202ENST00000395066 ASIPP42127 132 aa15.55■□□□□ 0.08
CLK3-202ENST00000395066 NDUFA4O00483 81 aa15.54■□□□□ 0.08
CLK3-202ENST00000395066 RNF223E7ERA6 249 aa15.54■□□□□ 0.08
CLK3-202ENST00000395066 FLNCQ14315 2725 aa15.54■□□□□ 0.08
CLK3-202ENST00000395066 LGALS1P09382 135 aaKnown RBP15.53■□□□□ 0.08
CLK3-202ENST00000395066 TMEM95Q3KNT9 176 aa15.53■□□□□ 0.08
CLK3-202ENST00000395066 RHPN1-AS1Q9BWJ2 59 aa15.53■□□□□ 0.08
CLK3-202ENST00000395066 JPT2Q9H910 190 aa15.53■□□□□ 0.08
CLK3-202ENST00000395066 CFAP46Q8IYW2 2715 aa15.53■□□□□ 0.08
CLK3-202ENST00000395066 HOXA3O43365 443 aaPredicted RBP15.53■□□□□ 0.08
CLK3-202ENST00000395066 MORN3Q6PF18 240 aaPredicted RBP15.53■□□□□ 0.08
CLK3-202ENST00000395066 DPH3P1Q9H4G8 78 aa15.53■□□□□ 0.08
CLK3-202ENST00000395066 RNASE3P12724 160 aaKnown RBP15.52■□□□□ 0.08
CLK3-202ENST00000395066 C20orf78Q9BR46 151 aa15.52■□□□□ 0.08
CLK3-202ENST00000395066 OVOL1O14753 267 aa15.51■□□□□ 0.07
CLK3-202ENST00000395066 BAALCQ8WXS3 180 aa15.51■□□□□ 0.07
CLK3-202ENST00000395066 LENEPQ9Y5L5 61 aa15.51■□□□□ 0.07
CLK3-202ENST00000395066 INSL3P51460 131 aa15.51■□□□□ 0.07
CLK3-202ENST00000395066 SCGB2A2Q13296 93 aa15.51■□□□□ 0.07
CLK3-202ENST00000395066 PRADC1Q9BSG0 188 aa15.51■□□□□ 0.07
CLK3-202ENST00000395066 CRIP2P52943 208 aaPredicted RBP15.5■□□□□ 0.07
CLK3-202ENST00000395066 C2orf66Q6UXQ4 117 aa15.5■□□□□ 0.07
CLK3-202ENST00000395066 PGPEP1Q9NXJ5 209 aa15.5■□□□□ 0.07
CLK3-202ENST00000395066 DOPEY2Q9Y3R5 2298 aa15.5■□□□□ 0.07
CLK3-202ENST00000395066 EMP1P54849 157 aa15.49■□□□□ 0.07
CLK3-202ENST00000395066 NDUFS8O00217 210 aa15.49■□□□□ 0.07
CLK3-202ENST00000395066 IGHG2P01859 326 aa15.49■□□□□ 0.07
CLK3-202ENST00000395066 CLEC2AQ6UVW9 174 aa15.49■□□□□ 0.07
CLK3-202ENST00000395066 MRPL16Q9NX20 251 aaKnown RBP15.49■□□□□ 0.07
CLK3-202ENST00000395066 SORL1Q92673 2214 aa15.49■□□□□ 0.07
CLK3-202ENST00000395066 PKD1L2Q7Z442 2459 aa15.49■□□□□ 0.07
CLK3-202ENST00000395066 ZNF815PA8K554 130 aa15.48■□□□□ 0.07
CLK3-202ENST00000395066 IGHV4-30-2A0A087WSY4 118 aa15.48■□□□□ 0.07
CLK3-202ENST00000395066 PRSS29PA6NIE9 313 aa15.48■□□□□ 0.07
CLK3-202ENST00000395066 FAM19A4Q96LR4 140 aa15.48■□□□□ 0.07
CLK3-202ENST00000395066 C10orf99Q6UWK7 81 aa15.47■□□□□ 0.07
CLK3-202ENST00000395066 ZANQ9Y493 2812 aa15.47■□□□□ 0.07
CLK3-202ENST00000395066 A0A087WWL8 130 aa15.47■□□□□ 0.07
CLK3-202ENST00000395066 TMEM238LA0A1B0GVL6 79 aa15.47■□□□□ 0.07
CLK3-202ENST00000395066 A6NJY4 79 aa15.47■□□□□ 0.07
CLK3-202ENST00000395066 SCGB1D4Q6XE38 83 aa15.47■□□□□ 0.07
CLK3-202ENST00000395066 PIMREGQ9BSJ6 248 aa15.47■□□□□ 0.07
CLK3-202ENST00000395066 DUSP14O95147 198 aaKnown RBP15.47■□□□□ 0.07
CLK3-202ENST00000395066 APOMO95445 188 aa15.47■□□□□ 0.07
CLK3-202ENST00000395066 A6NDX4 124 aa15.46■□□□□ 0.07
CLK3-202ENST00000395066 AVPP01185 164 aa15.46■□□□□ 0.07
CLK3-202ENST00000395066 IGKV3-20P01619 116 aa15.46■□□□□ 0.07
CLK3-202ENST00000395066 ATP6V0BQ99437 205 aa15.46■□□□□ 0.07
CLK3-202ENST00000395066 A0A1B0GV72 72 aa15.46■□□□□ 0.06
CLK3-202ENST00000395066 PLEKHB2Q96CS7 222 aa15.46■□□□□ 0.06
CLK3-202ENST00000395066 CCL19Q99731 98 aa15.46■□□□□ 0.06
CLK3-202ENST00000395066 LINC01549A6NIU2 74 aa15.45■□□□□ 0.06
CLK3-202ENST00000395066 DLX4Q92988 240 aaPredicted RBP15.45■□□□□ 0.06
CLK3-202ENST00000395066 USMG5Q96IX5 58 aa15.45■□□□□ 0.06
CLK3-202ENST00000395066 TRAV12-3A0A0B4J271 114 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms