RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 HIST1H4GQ99525 98 aa15.35■□□□□ 0.05
CLN5-201ENST00000377453 MUC4Q99102 2169 aa15.35■□□□□ 0.05
CLN5-201ENST00000377453 PRSS47A8MTI9 375 aa15.34■□□□□ 0.05
CLN5-201ENST00000377453 RNASE3P12724 160 aaKnown RBP15.34■□□□□ 0.05
CLN5-201ENST00000377453 MRAP2Q96G30 205 aa15.34■□□□□ 0.05
CLN5-201ENST00000377453 PRORYQ9H606 182 aa15.34■□□□□ 0.05
CLN5-201ENST00000377453 RHPN1-AS1Q9BWJ2 59 aa15.34■□□□□ 0.05
CLN5-201ENST00000377453 CSTL1Q9H114 145 aa15.34■□□□□ 0.05
CLN5-201ENST00000377453 F8VRH5 84 aa15.33■□□□□ 0.05
CLN5-201ENST00000377453 G3V4G9 280 aa15.33■□□□□ 0.05
CLN5-201ENST00000377453 C2orf66Q6UXQ4 117 aa15.33■□□□□ 0.05
CLN5-201ENST00000377453 LINC00477Q96M19 166 aa15.33■□□□□ 0.05
CLN5-201ENST00000377453 DPH3P1Q9H4G8 78 aa15.33■□□□□ 0.05
CLN5-201ENST00000377453 TM2D2Q9BX73 214 aa15.33■□□□□ 0.04
CLN5-201ENST00000377453 CYSLTR1Q9Y271 337 aa15.33■□□□□ 0.04
CLN5-201ENST00000377453 MYO18BQ8IUG5 2567 aa15.33■□□□□ 0.04
CLN5-201ENST00000377453 TEX48A0A1B0GUV7 120 aa15.32■□□□□ 0.04
CLN5-201ENST00000377453 H7C1H1 209 aa15.32■□□□□ 0.04
CLN5-201ENST00000377453 USP9XQ93008 2570 aaPredicted RBP15.32■□□□□ 0.04
CLN5-201ENST00000377453 A0A087WWL8 130 aa15.32■□□□□ 0.04
CLN5-201ENST00000377453 NDUFA4O00483 81 aa15.32■□□□□ 0.04
CLN5-201ENST00000377453 IGKV3-20P01619 116 aa15.32■□□□□ 0.04
CLN5-201ENST00000377453 C10orf99Q6UWK7 81 aa15.32■□□□□ 0.04
CLN5-201ENST00000377453 BAALCQ8WXS3 180 aa15.32■□□□□ 0.04
CLN5-201ENST00000377453 IGLL5B9A064 214 aa15.31■□□□□ 0.04
CLN5-201ENST00000377453 C12orf74Q32Q52 190 aa15.31■□□□□ 0.04
CLN5-201ENST00000377453 OR5A1Q8NGJ0 315 aa15.31■□□□□ 0.04
CLN5-201ENST00000377453 TOMM6Q96B49 74 aa15.31■□□□□ 0.04
CLN5-201ENST00000377453 DUSP14O95147 198 aaKnown RBP15.31■□□□□ 0.04
CLN5-201ENST00000377453 NEXN-AS1Q8NBZ9 246 aa15.31■□□□□ 0.04
CLN5-201ENST00000377453 CENPEQ02224 2701 aa15.31■□□□□ 0.04
CLN5-201ENST00000377453 PLNP26678 52 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 SFTA2Q6UW10 78 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 DOPEY2Q9Y3R5 2298 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 PRSS29PA6NIE9 313 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 OVOL1O14753 267 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 WFDC2Q14508 124 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 SORL1Q92673 2214 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 H3BMG7 143 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 HLA-DRB4P13762 266 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 KLHL30-AS1Q8NEE0 82 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 HLA-DRB4X5D2U9 266 aa15.3■□□□□ 0.04
CLN5-201ENST00000377453 OR11H12B2RN74 326 aa15.29■□□□□ 0.04
CLN5-201ENST00000377453 OR11H1Q8NG94 326 aa15.29■□□□□ 0.04
CLN5-201ENST00000377453 OR11H2Q8NH07 326 aa15.29■□□□□ 0.04
CLN5-201ENST00000377453 PLEKHB2Q96CS7 222 aa15.29■□□□□ 0.04
CLN5-201ENST00000377453 ZNF479Q96JC4 524 aa15.29■□□□□ 0.04
CLN5-201ENST00000377453 RPL39P62891 51 aaKnown RBP15.29■□□□□ 0.04
CLN5-201ENST00000377453 ORMDL2Q53FV1 153 aa15.29■□□□□ 0.04
CLN5-201ENST00000377453 TRBV7-3A0A075B6L6 115 aa15.28■□□□□ 0.04
CLN5-201ENST00000377453 IGHV4-30-2A0A087WSY4 118 aa15.28■□□□□ 0.04
CLN5-201ENST00000377453 AVPP01185 164 aa15.28■□□□□ 0.04
CLN5-201ENST00000377453 PRADC1Q9BSG0 188 aa15.28■□□□□ 0.04
CLN5-201ENST00000377453 LENEPQ9Y5L5 61 aa15.28■□□□□ 0.04
CLN5-201ENST00000377453 TRAV12-3A0A0B4J271 114 aa15.28■□□□□ 0.04
CLN5-201ENST00000377453 MYMXA0A1B0GTQ4 84 aa15.28■□□□□ 0.04
CLN5-201ENST00000377453 FAM19A4Q96LR4 140 aa15.28■□□□□ 0.04
CLN5-201ENST00000377453 E9PLD3 99 aa15.27■□□□□ 0.04
CLN5-201ENST00000377453 LGALS1P09382 135 aaKnown RBP15.27■□□□□ 0.04
CLN5-201ENST00000377453 CD300EQ496F6 205 aaPredicted RBP15.27■□□□□ 0.04
CLN5-201ENST00000377453 USP24Q9UPU5 2620 aa15.27■□□□□ 0.03
CLN5-201ENST00000377453 TRAV12-2A0A075B6T6 113 aa15.27■□□□□ 0.03
CLN5-201ENST00000377453 SH2D6Q7Z4S9 175 aa15.27■□□□□ 0.03
CLN5-201ENST00000377453 NRGNQ92686 78 aa15.27■□□□□ 0.03
CLN5-201ENST00000377453 TRAV12-1A0A0B4J245 112 aa15.26■□□□□ 0.03
CLN5-201ENST00000377453 IGHG2P01859 326 aa15.26■□□□□ 0.03
CLN5-201ENST00000377453 CRIP2P52943 208 aaPredicted RBP15.26■□□□□ 0.03
CLN5-201ENST00000377453 TSHBP01222 138 aa15.26■□□□□ 0.03
CLN5-201ENST00000377453 SLC25A16P16260 332 aa15.26■□□□□ 0.03
CLN5-201ENST00000377453 FAM74A4Q5TZK3 123 aa15.26■□□□□ 0.03
CLN5-201ENST00000377453 CRYGDP07320 174 aa15.25■□□□□ 0.03
CLN5-201ENST00000377453 LINC00315P59091 139 aa15.25■□□□□ 0.03
CLN5-201ENST00000377453 A6NDX4 124 aa15.25■□□□□ 0.03
CLN5-201ENST00000377453 F5H697 171 aa15.25■□□□□ 0.03
CLN5-201ENST00000377453 C20orf78Q9BR46 151 aa15.25■□□□□ 0.03
CLN5-201ENST00000377453 TP53TG1Q9Y2A0 90 aa15.25■□□□□ 0.03
CLN5-201ENST00000377453 ZNF815PA8K554 130 aa15.24■□□□□ 0.03
CLN5-201ENST00000377453 CD7P09564 240 aa15.24■□□□□ 0.03
CLN5-201ENST00000377453 ZNF688P0C7X2 276 aa15.24■□□□□ 0.03
CLN5-201ENST00000377453 PIMREGQ9BSJ6 248 aa15.24■□□□□ 0.03
CLN5-201ENST00000377453 C11orf86A6NJI1 115 aa15.23■□□□□ 0.03
CLN5-201ENST00000377453 PSMG4Q5JS54 123 aa15.23■□□□□ 0.03
CLN5-201ENST00000377453 SUMO4Q6EEV6 95 aa15.23■□□□□ 0.03
CLN5-201ENST00000377453 KIF25-AS1Q9Y6Z4 181 aa15.23■□□□□ 0.03
CLN5-201ENST00000377453 SCGB2A2Q13296 93 aa15.23■□□□□ 0.03
CLN5-201ENST00000377453 FOXI2Q6ZQN5 318 aa15.23■□□□□ 0.03
CLN5-201ENST00000377453 CCL19Q99731 98 aa15.23■□□□□ 0.03
CLN5-201ENST00000377453 EPG5Q9HCE0 2579 aa15.23■□□□□ 0.03
CLN5-201ENST00000377453 DAZ1Q9NQZ3 744 aaKnown RBP15.22■□□□□ 0.03
CLN5-201ENST00000377453 ZANQ9Y493 2812 aa15.22■□□□□ 0.03
CLN5-201ENST00000377453 C10orf105Q8TEF2 133 aa15.22■□□□□ 0.03
CLN5-201ENST00000377453 USMG5Q96IX5 58 aa15.22■□□□□ 0.03
CLN5-201ENST00000377453 ATP5J2P56134 94 aa15.21■□□□□ 0.03
CLN5-201ENST00000377453 ETDBQ3ZM63 59 aa15.21■□□□□ 0.03
CLN5-201ENST00000377453 FAM159AQ6UWV7 190 aa15.21■□□□□ 0.03
CLN5-201ENST00000377453 OPRPNQ99935 248 aaPredicted RBP15.21■□□□□ 0.03
CLN5-201ENST00000377453 SCGB1D4Q6XE38 83 aa15.21■□□□□ 0.03
CLN5-201ENST00000377453 DUX5Q96PT3 197 aa15.21■□□□□ 0.03
CLN5-201ENST00000377453 MDFICQ9P1T7 246 aa15.21■□□□□ 0.03
CLN5-201ENST00000377453 FAM208BQ5VWN6 2430 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms