RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 RNF152Q8N8N0 203 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 CGB3P0DN86 165 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 CGB7P0DN87 165 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 SUMO4Q6EEV6 95 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 TOMM6Q96B49 74 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 MRPL36Q9P0J6 103 aaKnown RBP16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 ODF1Q14990 250 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 ATP6V0E2Q8NHE4 81 aa16.46■□□□□ 0.23
TGFBR1-202ENST00000374994 F6UB75 175 aa16.45■□□□□ 0.22
TGFBR1-202ENST00000374994 BRWD1-AS2P59051 145 aa16.45■□□□□ 0.22
TGFBR1-202ENST00000374994 RPL39LQ96EH5 51 aaKnown RBP16.45■□□□□ 0.22
TGFBR1-202ENST00000374994 MBD6Q96DN6 1003 aa16.44■□□□□ 0.22
TGFBR1-202ENST00000374994 IGKV1D-37A0A075B6S9 117 aa16.43■□□□□ 0.22
TGFBR1-202ENST00000374994 G3V4G9 280 aa16.43■□□□□ 0.22
TGFBR1-202ENST00000374994 PROP1O75360 226 aa16.43■□□□□ 0.22
TGFBR1-202ENST00000374994 TRACP01848 142 aa16.43■□□□□ 0.22
TGFBR1-202ENST00000374994 EIF4EBP1Q13541 118 aaPredicted RBP16.42■□□□□ 0.22
TGFBR1-202ENST00000374994 A4D1N5 150 aa16.42■□□□□ 0.22
TGFBR1-202ENST00000374994 PIFOQ8TCI5 191 aa16.42■□□□□ 0.22
TGFBR1-202ENST00000374994 MLST8Q9BVC4 326 aa16.41■□□□□ 0.22
TGFBR1-202ENST00000374994 Q9H8V8 135 aa16.41■□□□□ 0.22
TGFBR1-202ENST00000374994 WFDC2Q14508 124 aa16.41■□□□□ 0.22
TGFBR1-202ENST00000374994 LINC01620Q4KN68 170 aa16.41■□□□□ 0.22
TGFBR1-202ENST00000374994 SLC25A29Q8N8R3 303 aa16.41■□□□□ 0.22
TGFBR1-202ENST00000374994 E7EUB6 86 aa16.41■□□□□ 0.22
TGFBR1-202ENST00000374994 CITED1Q99966 193 aa16.41■□□□□ 0.22
TGFBR1-202ENST00000374994 FOXI1Q12951 378 aa16.41■□□□□ 0.22
TGFBR1-202ENST00000374994 Q8N9W7 124 aa16.4■□□□□ 0.22
TGFBR1-202ENST00000374994 BAALC-AS2P0C853 105 aa16.4■□□□□ 0.22
TGFBR1-202ENST00000374994 C11orf86A6NJI1 115 aa16.39■□□□□ 0.22
TGFBR1-202ENST00000374994 MUSTN1Q8IVN3 82 aa16.39■□□□□ 0.22
TGFBR1-202ENST00000374994 RNF223E7ERA6 249 aa16.39■□□□□ 0.21
TGFBR1-202ENST00000374994 NBASA2RRP1 2371 aa16.39■□□□□ 0.21
TGFBR1-202ENST00000374994 A0A0J9YXV3 536 aa16.39■□□□□ 0.21
TGFBR1-202ENST00000374994 CRLF1O75462 422 aa16.39■□□□□ 0.21
TGFBR1-202ENST00000374994 BAALCQ8WXS3 180 aa16.39■□□□□ 0.21
TGFBR1-202ENST00000374994 TTTY13Q9BZ97 58 aa16.38■□□□□ 0.21
TGFBR1-202ENST00000374994 DOCK10Q96BY6 2186 aa16.38■□□□□ 0.21
TGFBR1-202ENST00000374994 PRAC2D3DTV9 90 aa16.38■□□□□ 0.21
TGFBR1-202ENST00000374994 WT1P19544 449 aaPredicted RBP16.38■□□□□ 0.21
TGFBR1-202ENST00000374994 H0YGX0 51 aa16.38■□□□□ 0.21
TGFBR1-202ENST00000374994 ICOSQ9Y6W8 199 aa16.37■□□□□ 0.21
TGFBR1-202ENST00000374994 ZNF561-AS1K7EIQ3 104 aa16.37■□□□□ 0.21
TGFBR1-202ENST00000374994 K7EMT4 169 aa16.37■□□□□ 0.21
TGFBR1-202ENST00000374994 COL6A6A6NMZ7 2263 aa16.37■□□□□ 0.21
TGFBR1-202ENST00000374994 DENND4AQ7Z401 1863 aa16.37■□□□□ 0.21
TGFBR1-202ENST00000374994 CRYBA4P53673 196 aa16.37■□□□□ 0.21
TGFBR1-202ENST00000374994 DOPEY2Q9Y3R5 2298 aa16.37■□□□□ 0.21
TGFBR1-202ENST00000374994 EML6Q6ZMW3 1958 aa16.36■□□□□ 0.21
TGFBR1-202ENST00000374994 B5MCH6 92 aa16.36■□□□□ 0.21
TGFBR1-202ENST00000374994 SEM1Q6ZVN7 128 aa16.36■□□□□ 0.21
TGFBR1-202ENST00000374994 RNASE13Q5GAN3 156 aaKnown RBP16.36■□□□□ 0.21
TGFBR1-202ENST00000374994 HOXD3P31249 432 aaPredicted RBP16.35■□□□□ 0.21
TGFBR1-202ENST00000374994 DAD1P61803 113 aa16.35■□□□□ 0.21
TGFBR1-202ENST00000374994 H3BT86 120 aa16.35■□□□□ 0.21
TGFBR1-202ENST00000374994 CFHR3Q02985 330 aa16.35■□□□□ 0.21
TGFBR1-202ENST00000374994 GDF5OSQ5U4N7 250 aa16.35■□□□□ 0.21
TGFBR1-202ENST00000374994 HAMPP81172 84 aa16.35■□□□□ 0.21
TGFBR1-202ENST00000374994 MSMPQ1L6U9 139 aa16.35■□□□□ 0.21
TGFBR1-202ENST00000374994 U3KQE9 123 aa16.35■□□□□ 0.21
TGFBR1-202ENST00000374994 NXPH4O95158 308 aa16.34■□□□□ 0.21
TGFBR1-202ENST00000374994 ORMDL1Q9P0S3 153 aa16.34■□□□□ 0.21
TGFBR1-202ENST00000374994 VPREB3Q9UKI3 123 aa16.34■□□□□ 0.21
TGFBR1-202ENST00000374994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.34■□□□□ 0.21
TGFBR1-202ENST00000374994 IGKV2-29A2NJV5 120 aaPredicted RBP16.34■□□□□ 0.21
TGFBR1-202ENST00000374994 AJUBAQ96IF1 538 aa16.34■□□□□ 0.21
TGFBR1-202ENST00000374994 DSCR8Q96T75 97 aa16.34■□□□□ 0.21
TGFBR1-202ENST00000374994 GTF3C1Q12789 2109 aa16.34■□□□□ 0.21
TGFBR1-202ENST00000374994 CACNA1BQ00975 2339 aa16.33■□□□□ 0.2
TGFBR1-202ENST00000374994 FANCD2OSQ96PS1 177 aa16.33■□□□□ 0.2
TGFBR1-202ENST00000374994 TMEM126AQ9H061 195 aa16.33■□□□□ 0.2
TGFBR1-202ENST00000374994 TP53TG3Q9ULZ0 132 aa16.32■□□□□ 0.2
TGFBR1-202ENST00000374994 C5orf56Q8N8D9 126 aa16.32■□□□□ 0.2
TGFBR1-202ENST00000374994 IGLC6P0CF74 106 aa16.32■□□□□ 0.2
TGFBR1-202ENST00000374994 TRBV10-2A0A0K0K1G8 114 aa16.32■□□□□ 0.2
TGFBR1-202ENST00000374994 LINC00322Q6ZN03 302 aaPredicted RBP16.32■□□□□ 0.2
TGFBR1-202ENST00000374994 Q8N7P7 452 aa16.31■□□□□ 0.2
TGFBR1-202ENST00000374994 KMT2EQ8IZD2 1858 aa16.31■□□□□ 0.2
TGFBR1-202ENST00000374994 Q71RC1 249 aaPredicted RBP16.31■□□□□ 0.2
TGFBR1-202ENST00000374994 RBMY1FQ15415 496 aaKnown RBP16.3■□□□□ 0.2
TGFBR1-202ENST00000374994 SPRY2O43597 315 aa16.3■□□□□ 0.2
TGFBR1-202ENST00000374994 MED13Q9UHV7 2174 aa16.3■□□□□ 0.2
TGFBR1-202ENST00000374994 SP5Q6BEB4 398 aaPredicted RBP16.3■□□□□ 0.2
TGFBR1-202ENST00000374994 TMEM89A2RUT3 159 aa16.3■□□□□ 0.2
TGFBR1-202ENST00000374994 F5H768 121 aa16.29■□□□□ 0.2
TGFBR1-202ENST00000374994 ARFGEF3Q5TH69 2177 aa16.29■□□□□ 0.2
TGFBR1-202ENST00000374994 ABCA4P78363 2273 aa16.29■□□□□ 0.2
TGFBR1-202ENST00000374994 A0A0B4J2C4 111 aa16.29■□□□□ 0.2
TGFBR1-202ENST00000374994 DAZ2Q13117 558 aaKnown RBP16.29■□□□□ 0.2
TGFBR1-202ENST00000374994 DAZ4Q86SG3 579 aaKnown RBP16.29■□□□□ 0.2
TGFBR1-202ENST00000374994 DAZ3Q9NR90 486 aaKnown RBP16.29■□□□□ 0.2
TGFBR1-202ENST00000374994 TM2D2Q9BX73 214 aa16.28■□□□□ 0.2
TGFBR1-202ENST00000374994 DEFB112Q30KQ8 113 aa16.28■□□□□ 0.2
TGFBR1-202ENST00000374994 LOXL1Q08397 574 aaPredicted RBP16.28■□□□□ 0.2
TGFBR1-202ENST00000374994 RPL39P62891 51 aaKnown RBP16.28■□□□□ 0.2
TGFBR1-202ENST00000374994 TNRC6AQ8NDV7 1962 aaKnown RBP16.28■□□□□ 0.2
TGFBR1-202ENST00000374994 GRNP28799 593 aaKnown RBP16.27■□□□□ 0.2
TGFBR1-202ENST00000374994 GPHB5Q86YW7 130 aa16.27■□□□□ 0.2
TGFBR1-202ENST00000374994 APOC4P55056 127 aa16.27■□□□□ 0.19
TGFBR1-202ENST00000374994 NKAPP1Q8N9T2 125 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms