RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MDFIQ99750 246 aa10.57□□□□□ -0.72
HMGCL-203ENST00000374490 INAFM1C9JVW0 142 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 RNF223E7ERA6 249 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 K7EP13 123 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 DPM2O94777 84 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 PPP1R17O96001 155 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 IGKCP01834 107 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 PRR9Q5T870 116 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 Q6ZVH6 145 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 C18orf15Q96N68 181 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 C20orf78Q9BR46 151 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 DPH3P1Q9H4G8 78 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 DAZ1Q9NQZ3 744 aaKnown RBP10.56□□□□□ -0.72
HMGCL-203ENST00000374490 HIGD1BQ9P298 99 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 DKK2Q9UBU2 259 aa10.56□□□□□ -0.72
HMGCL-203ENST00000374490 MAP1AP78559 2803 aaPredicted RBP10.56□□□□□ -0.72
HMGCL-203ENST00000374490 TMEM89A2RUT3 159 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 H3BRM9 83 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 J3QLI3 93 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 M0R381 172 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 GATA1P15976 413 aaPredicted RBP10.55□□□□□ -0.72
HMGCL-203ENST00000374490 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
HMGCL-203ENST00000374490 ID1P41134 155 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 CFHR3Q02985 330 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 ORMDL2Q53FV1 153 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 RHPN1-AS1Q9BWJ2 59 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 CBY1Q9Y3M2 126 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 FN1P02751 2386 aaKnown RBP10.55□□□□□ -0.72
HMGCL-203ENST00000374490 CBY3A6NI87 242 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 IGHV3-11P01762 117 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 WFDC3Q8IUB2 231 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 SMIM2Q9BVW6 85 aa10.55□□□□□ -0.72
HMGCL-203ENST00000374490 VPS13CQ709C8 3753 aa10.54□□□□□ -0.72
HMGCL-203ENST00000374490 C7orf71A4D174 169 aa10.54□□□□□ -0.72
HMGCL-203ENST00000374490 TGFAP01135 160 aa10.54□□□□□ -0.72
HMGCL-203ENST00000374490 NMUP48645 174 aa10.54□□□□□ -0.72
HMGCL-203ENST00000374490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.54□□□□□ -0.72
HMGCL-203ENST00000374490 ADAMTSL5Q6ZMM2 481 aa10.54□□□□□ -0.72
HMGCL-203ENST00000374490 MAPK1IP1LQ8NDC0 245 aa10.54□□□□□ -0.72
HMGCL-203ENST00000374490 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
HMGCL-203ENST00000374490 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
HMGCL-203ENST00000374490 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
HMGCL-203ENST00000374490 AP1S3Q96PC3 154 aa10.53□□□□□ -0.72
HMGCL-203ENST00000374490 KLK15Q9H2R5 256 aa10.53□□□□□ -0.72
HMGCL-203ENST00000374490 A0A087WX48 190 aa10.52□□□□□ -0.73
HMGCL-203ENST00000374490 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.73
HMGCL-203ENST00000374490 NXPH4O95158 308 aa10.52□□□□□ -0.73
HMGCL-203ENST00000374490 PLNP26678 52 aa10.52□□□□□ -0.73
HMGCL-203ENST00000374490 BLCAPP62952 87 aa10.52□□□□□ -0.73
HMGCL-203ENST00000374490 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.73
HMGCL-203ENST00000374490 TRAV26-2A0A0B4J265 109 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 C9orf118A6NHY6 69 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.51□□□□□ -0.73
HMGCL-203ENST00000374490 SUMO2P61956 95 aaKnown RBP10.51□□□□□ -0.73
HMGCL-203ENST00000374490 HHLA3Q9XRX5 114 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 HIVEP2P31629 2446 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 JMJD1CQ15652 2540 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 LINC01549A6NIU2 74 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 CRLF1O75462 422 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 AVPP01185 164 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 IGHV4-31P0DP07 118 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 RNASE4P34096 147 aaKnown RBP10.51□□□□□ -0.73
HMGCL-203ENST00000374490 TM4SF20Q53R12 229 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 ODF3Q96PU9 254 aa10.51□□□□□ -0.73
HMGCL-203ENST00000374490 NSD1Q96L73 2696 aaPredicted RBP10.51□□□□□ -0.73
HMGCL-203ENST00000374490 CR1P17927 2039 aa10.5□□□□□ -0.73
HMGCL-203ENST00000374490 KLLNB2CW77 178 aa10.5□□□□□ -0.73
HMGCL-203ENST00000374490 J3KRW8 73 aa10.5□□□□□ -0.73
HMGCL-203ENST00000374490 RPL32P62910 135 aaKnown RBP10.5□□□□□ -0.73
HMGCL-203ENST00000374490 AMMECR1LQ6DCA0 310 aa10.5□□□□□ -0.73
HMGCL-203ENST00000374490 Q6ZQT7 251 aa10.5□□□□□ -0.73
HMGCL-203ENST00000374490 GTF2H5Q6ZYL4 71 aa10.5□□□□□ -0.73
HMGCL-203ENST00000374490 PCP2Q8IVA1 136 aa10.5□□□□□ -0.73
HMGCL-203ENST00000374490 H7C1H1 209 aa10.49□□□□□ -0.73
HMGCL-203ENST00000374490 ZC2HC1BQ5TFG8 222 aa10.49□□□□□ -0.73
HMGCL-203ENST00000374490 TOMM6Q96B49 74 aa10.49□□□□□ -0.73
HMGCL-203ENST00000374490 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
HMGCL-203ENST00000374490 PSMB8P28062 276 aa10.48□□□□□ -0.73
HMGCL-203ENST00000374490 RASL10AQ92737 203 aa10.48□□□□□ -0.73
HMGCL-203ENST00000374490 FBN3Q75N90 2809 aa10.48□□□□□ -0.73
HMGCL-203ENST00000374490 F8VRH5 84 aa10.47□□□□□ -0.73
HMGCL-203ENST00000374490 MGPP08493 103 aa10.47□□□□□ -0.73
HMGCL-203ENST00000374490 RNASE3P12724 160 aaKnown RBP10.47□□□□□ -0.73
HMGCL-203ENST00000374490 TAL2Q16559 108 aa10.47□□□□□ -0.73
HMGCL-203ENST00000374490 SCGB3A1Q96QR1 104 aa10.47□□□□□ -0.73
HMGCL-203ENST00000374490 MRPL35Q9NZE8 188 aaKnown RBP10.47□□□□□ -0.73
HMGCL-203ENST00000374490 FAM159AQ6UWV7 190 aa10.47□□□□□ -0.73
HMGCL-203ENST00000374490 Q6ZS46 218 aa10.47□□□□□ -0.73
HMGCL-203ENST00000374490 C14orf178Q8N769 122 aaPredicted RBP10.47□□□□□ -0.73
HMGCL-203ENST00000374490 CHAC1Q9BUX1 264 aa10.47□□□□□ -0.73
HMGCL-203ENST00000374490 TMEM160Q9NX00 188 aa10.47□□□□□ -0.73
HMGCL-203ENST00000374490 CSPG4Q6UVK1 2322 aa10.46□□□□□ -0.73
HMGCL-203ENST00000374490 IGKV2D-26A0A0A0MRZ7 120 aa10.46□□□□□ -0.74
HMGCL-203ENST00000374490 GAGE10A6NGK3 116 aa10.46□□□□□ -0.74
HMGCL-203ENST00000374490 F6UB75 175 aa10.46□□□□□ -0.74
HMGCL-203ENST00000374490 GTSCR1Q86UQ5 136 aa10.46□□□□□ -0.74
HMGCL-203ENST00000374490 DCANP1Q8TF63 244 aa10.46□□□□□ -0.74
HMGCL-203ENST00000374490 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms