RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 CHAC1Q9BUX1 264 aa11.72□□□□□ -0.53
TMEM50A-201ENST00000374358 JPT2Q9H910 190 aa11.72□□□□□ -0.53
TMEM50A-201ENST00000374358 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
TMEM50A-201ENST00000374358 A0A0G2JLM5 398 aa11.72□□□□□ -0.53
TMEM50A-201ENST00000374358 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.53
TMEM50A-201ENST00000374358 LENEPQ9Y5L5 61 aa11.72□□□□□ -0.53
TMEM50A-201ENST00000374358 ZNF462Q96JM2 2506 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 GAGE10A6NGK3 116 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 RNF223E7ERA6 249 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 H3BRM9 83 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 SIVA1O15304 175 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 ATP5LO75964 103 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 IGLV1-40P01703 118 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 IGHV4-59P01825 116 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 SUMO2P61956 95 aaKnown RBP11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 AP1S3Q96PC3 154 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 ATP6V0BQ99437 205 aa11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 DAZ1Q9NQZ3 744 aaKnown RBP11.71□□□□□ -0.53
TMEM50A-201ENST00000374358 TLN2Q9Y4G6 2542 aa11.71□□□□□ -0.54
TMEM50A-201ENST00000374358 IGKV3-20P01619 116 aa11.71□□□□□ -0.54
TMEM50A-201ENST00000374358 FAM19A4Q96LR4 140 aa11.71□□□□□ -0.54
TMEM50A-201ENST00000374358 MRAP2Q96G30 205 aa11.7□□□□□ -0.54
TMEM50A-201ENST00000374358 ZNF469Q96JG9 3925 aaPredicted RBP11.7□□□□□ -0.54
TMEM50A-201ENST00000374358 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
TMEM50A-201ENST00000374358 PRSS47A8MTI9 375 aa11.7□□□□□ -0.54
TMEM50A-201ENST00000374358 COTL1Q14019 142 aa11.7□□□□□ -0.54
TMEM50A-201ENST00000374358 DPH3P1Q9H4G8 78 aa11.7□□□□□ -0.54
TMEM50A-201ENST00000374358 A0A087WX48 190 aa11.69□□□□□ -0.54
TMEM50A-201ENST00000374358 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.69□□□□□ -0.54
TMEM50A-201ENST00000374358 OCIAD2Q56VL3 154 aa11.69□□□□□ -0.54
TMEM50A-201ENST00000374358 CFHR3Q02985 330 aa11.68□□□□□ -0.54
TMEM50A-201ENST00000374358 SMPXQ9UHP9 88 aa11.68□□□□□ -0.54
TMEM50A-201ENST00000374358 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
TMEM50A-201ENST00000374358 TRAV12-3A0A0B4J271 114 aa11.68□□□□□ -0.54
TMEM50A-201ENST00000374358 SAP30O75446 220 aa11.68□□□□□ -0.54
TMEM50A-201ENST00000374358 ZNF688P0C7X2 276 aa11.68□□□□□ -0.54
TMEM50A-201ENST00000374358 UFSP1Q6NVU6 142 aa11.68□□□□□ -0.54
TMEM50A-201ENST00000374358 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
TMEM50A-201ENST00000374358 TRAV12-2A0A075B6T6 113 aa11.67□□□□□ -0.54
TMEM50A-201ENST00000374358 A0A087WWL8 130 aa11.67□□□□□ -0.54
TMEM50A-201ENST00000374358 H3BUA1 57 aa11.67□□□□□ -0.54
TMEM50A-201ENST00000374358 NDUFS8O00217 210 aa11.67□□□□□ -0.54
TMEM50A-201ENST00000374358 DEFB112Q30KQ8 113 aa11.67□□□□□ -0.54
TMEM50A-201ENST00000374358 DCANP1Q8TF63 244 aa11.67□□□□□ -0.54
TMEM50A-201ENST00000374358 NHP2Q9NX24 153 aaKnown RBP11.67□□□□□ -0.54
TMEM50A-201ENST00000374358 DUX5Q96PT3 197 aa11.66□□□□□ -0.54
TMEM50A-201ENST00000374358 C2orf66Q6UXQ4 117 aa11.66□□□□□ -0.54
TMEM50A-201ENST00000374358 CSTL1Q9H114 145 aa11.66□□□□□ -0.54
TMEM50A-201ENST00000374358 CDKN1BP46527 198 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 EMP1P54849 157 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 A0A1W2PPM0 123 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 B4DSR2 109 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 F8VRH5 84 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 K7EP34 96 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 PSMG4Q5JS54 123 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 TOMM6Q96B49 74 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 USP24Q9UPU5 2620 aa11.65□□□□□ -0.54
TMEM50A-201ENST00000374358 CD7P09564 240 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 APRG1Q8IVJ8 170 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 SPCS1Q9Y6A9 102 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 KLLNB2CW77 178 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 DUSP14O95147 198 aaKnown RBP11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 PSMB8P28062 276 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 LINC00315P59091 139 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 ORMDL2Q53FV1 153 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 HIGD1BQ9P298 99 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 NAV2Q8IVL1 2488 aa11.64□□□□□ -0.55
TMEM50A-201ENST00000374358 BRI3O95415 125 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 FAM74A4Q5TZK3 123 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 FAM159AQ6UWV7 190 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 NEXN-AS1Q8NBZ9 246 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 H7C1H1 209 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 SMIM13P0DJ93 91 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 PLNP26678 52 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 CEND1Q8N111 149 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 C20orf78Q9BR46 151 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 NBPF19A0A087WUL8 3843 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 GTF2H5Q6ZYL4 71 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 VPS25Q9BRG1 176 aa11.63□□□□□ -0.55
TMEM50A-201ENST00000374358 RPL39P62891 51 aaKnown RBP11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 SAMD5Q5TGI4 173 aa11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 MDFICQ9P1T7 246 aa11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 SONP18583 2426 aaKnown RBP11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 F5H697 171 aa11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 PRB1P04280 392 aa11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 SYNJ2BPP57105 145 aa11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 PHLDA1Q8WV24 401 aaPredicted RBP11.62□□□□□ -0.55
TMEM50A-201ENST00000374358 PRSS29PA6NIE9 313 aa11.61□□□□□ -0.55
TMEM50A-201ENST00000374358 HLA-DRB4P13762 266 aa11.61□□□□□ -0.55
TMEM50A-201ENST00000374358 HIST2H2BDQ6DRA6 164 aa11.61□□□□□ -0.55
TMEM50A-201ENST00000374358 HLA-DRB4X5D2U9 266 aa11.61□□□□□ -0.55
TMEM50A-201ENST00000374358 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
TMEM50A-201ENST00000374358 TGFAP01135 160 aa11.6□□□□□ -0.55
TMEM50A-201ENST00000374358 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
TMEM50A-201ENST00000374358 EPG5Q9HCE0 2579 aa11.6□□□□□ -0.55
TMEM50A-201ENST00000374358 TSHBP01222 138 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms