RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 C2orf66Q6UXQ4 117 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 RELNP78509 3460 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 NPC2P61916 151 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 ORMDL2Q53FV1 153 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 C11orf71Q6IPW1 123 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 JPT2Q9H910 190 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 TNFRSF18Q9Y5U5 241 aa13.59□□□□□ -0.23
TRAF3IP1-201ENST00000373327 RAX2Q96IS3 184 aa13.58□□□□□ -0.24
TRAF3IP1-201ENST00000373327 SPOCK3Q9BQ16 436 aa13.58□□□□□ -0.24
TRAF3IP1-201ENST00000373327 CHAC1Q9BUX1 264 aa13.58□□□□□ -0.24
TRAF3IP1-201ENST00000373327 IGHV3-16A0A0C4DH30 117 aa13.58□□□□□ -0.24
TRAF3IP1-201ENST00000373327 GAGE12BA1L429 117 aa13.58□□□□□ -0.24
TRAF3IP1-201ENST00000373327 SAMD5Q5TGI4 173 aa13.57□□□□□ -0.24
TRAF3IP1-201ENST00000373327 URB1-AS1Q96HZ7 61 aa13.57□□□□□ -0.24
TRAF3IP1-201ENST00000373327 FSTL3O95633 263 aa13.57□□□□□ -0.24
TRAF3IP1-201ENST00000373327 PHLDA1Q8WV24 401 aaPredicted RBP13.57□□□□□ -0.24
TRAF3IP1-201ENST00000373327 NDUFA4O00483 81 aa13.57□□□□□ -0.24
TRAF3IP1-201ENST00000373327 K7EP13 123 aa13.56□□□□□ -0.24
TRAF3IP1-201ENST00000373327 SEC11AP67812 179 aa13.56□□□□□ -0.24
TRAF3IP1-201ENST00000373327 Q8N8P6 123 aa13.56□□□□□ -0.24
TRAF3IP1-201ENST00000373327 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
TRAF3IP1-201ENST00000373327 TP53TG1Q9Y2A0 90 aa13.56□□□□□ -0.24
TRAF3IP1-201ENST00000373327 KLHL30-AS1Q8NEE0 82 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 CD5LO43866 347 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 LINC01545Q5VT33 79 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 OR9G4Q8NGQ1 327 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 IGHV7-4-1A0A0J9YVY3 117 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 LGALS9BQ3B8N2 356 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 LGALS9CQ6DKI2 356 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 Q8N976 141 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 LINC01356Q8N9X3 169 aa13.55□□□□□ -0.24
TRAF3IP1-201ENST00000373327 CTRLP40313 264 aa13.54□□□□□ -0.24
TRAF3IP1-201ENST00000373327 C10orf105Q8TEF2 133 aa13.54□□□□□ -0.24
TRAF3IP1-201ENST00000373327 HOXA3O43365 443 aaPredicted RBP13.54□□□□□ -0.24
TRAF3IP1-201ENST00000373327 SMIM2Q9BVW6 85 aa13.54□□□□□ -0.24
TRAF3IP1-201ENST00000373327 ZNF479Q96JC4 524 aa13.54□□□□□ -0.24
TRAF3IP1-201ENST00000373327 TCTEX1D4Q5JR98 221 aa13.53□□□□□ -0.24
TRAF3IP1-201ENST00000373327 VCX2Q9H322 139 aa13.53□□□□□ -0.24
TRAF3IP1-201ENST00000373327 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
TRAF3IP1-201ENST00000373327 A0A1B0GWB2 263 aa13.53□□□□□ -0.24
TRAF3IP1-201ENST00000373327 XCL2Q9UBD3 114 aa13.53□□□□□ -0.24
TRAF3IP1-201ENST00000373327 YAE1D1Q9NRH1 226 aa13.53□□□□□ -0.24
TRAF3IP1-201ENST00000373327 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.24
TRAF3IP1-201ENST00000373327 SDHAF1A6NFY7 115 aa13.52□□□□□ -0.24
TRAF3IP1-201ENST00000373327 Q5PR19 223 aa13.52□□□□□ -0.24
TRAF3IP1-201ENST00000373327 GEMIN7Q9H840 131 aaKnown RBP13.52□□□□□ -0.24
TRAF3IP1-201ENST00000373327 SCRT2Q9NQ03 307 aa13.52□□□□□ -0.24
TRAF3IP1-201ENST00000373327 FLNCQ14315 2725 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 NPIPB6E9PJ23 425 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 H7C1H1 209 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 AMTNQ6UX39 209 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 C20orf173Q96LM9 149 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 C11orf21Q9P2W6 132 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 SMPXQ9UHP9 88 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 ASH1LQ9NR48 2969 aaKnown RBP13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 SLC25A16P16260 332 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 Q96MF0 132 aa13.52□□□□□ -0.25
TRAF3IP1-201ENST00000373327 EDN2P20800 178 aa13.51□□□□□ -0.25
TRAF3IP1-201ENST00000373327 ZFAND3Q9H8U3 227 aa13.51□□□□□ -0.25
TRAF3IP1-201ENST00000373327 TMEM238LA0A1B0GVL6 79 aa13.51□□□□□ -0.25
TRAF3IP1-201ENST00000373327 A6NJY4 79 aa13.51□□□□□ -0.25
TRAF3IP1-201ENST00000373327 C16orf54Q6UWD8 224 aa13.51□□□□□ -0.25
TRAF3IP1-201ENST00000373327 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
TRAF3IP1-201ENST00000373327 RNASE8Q8TDE3 154 aaKnown RBP13.5□□□□□ -0.25
TRAF3IP1-201ENST00000373327 CD28P10747 220 aa13.5□□□□□ -0.25
TRAF3IP1-201ENST00000373327 NDUFS8O00217 210 aa13.5□□□□□ -0.25
TRAF3IP1-201ENST00000373327 PPP1R17O96001 155 aa13.49□□□□□ -0.25
TRAF3IP1-201ENST00000373327 SLURP1P55000 103 aa13.49□□□□□ -0.25
TRAF3IP1-201ENST00000373327 NSUN5P1Q3KNT7 163 aa13.49□□□□□ -0.25
TRAF3IP1-201ENST00000373327 MRPL52Q86TS9 123 aaKnown RBP13.49□□□□□ -0.25
TRAF3IP1-201ENST00000373327 RPL39P62891 51 aaKnown RBP13.49□□□□□ -0.25
TRAF3IP1-201ENST00000373327 LINC01559Q495D7 138 aa13.49□□□□□ -0.25
TRAF3IP1-201ENST00000373327 CST9LQ9H4G1 147 aa13.49□□□□□ -0.25
TRAF3IP1-201ENST00000373327 SPXQ9BT56 116 aa13.48□□□□□ -0.25
TRAF3IP1-201ENST00000373327 HECTD1Q9ULT8 2610 aa13.48□□□□□ -0.25
TRAF3IP1-201ENST00000373327 ADARB2-AS1A8MUL3 147 aa13.48□□□□□ -0.25
TRAF3IP1-201ENST00000373327 TMEM190Q8WZ59 177 aa13.48□□□□□ -0.25
TRAF3IP1-201ENST00000373327 RRN3P1Q2M238 152 aa13.48□□□□□ -0.25
TRAF3IP1-201ENST00000373327 FLNBO75369 2602 aaKnown RBP13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 TAX1BP3O14907 124 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 RPL35AP18077 110 aaKnown RBP13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 CFHR3Q02985 330 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 PRR9Q5T870 116 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 STHQ8IWL8 128 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 PRADC1Q9BSG0 188 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 VCYO14598 125 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 DUSP14O95147 198 aaKnown RBP13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 APRG1Q8IVJ8 170 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 PLNP26678 52 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 Q8N6K4 173 aa13.47□□□□□ -0.25
TRAF3IP1-201ENST00000373327 DEFB125Q8N687 156 aa13.46□□□□□ -0.25
TRAF3IP1-201ENST00000373327 TRGV1A0A0A0MS02 117 aa13.46□□□□□ -0.25
TRAF3IP1-201ENST00000373327 FXYD2P54710 66 aa13.46□□□□□ -0.25
TRAF3IP1-201ENST00000373327 PRSS29PA6NIE9 313 aa13.46□□□□□ -0.26
TRAF3IP1-201ENST00000373327 HIST2H2BCQ6DN03 193 aa13.46□□□□□ -0.26
TRAF3IP1-201ENST00000373327 ZNF625Q96I27 306 aaPredicted RBP13.46□□□□□ -0.26
TRAF3IP1-201ENST00000373327 TOMM7Q9P0U1 55 aa13.46□□□□□ -0.26
TRAF3IP1-201ENST00000373327 TRGV2A0A075B6R0 118 aa13.45□□□□□ -0.26
TRAF3IP1-201ENST00000373327 TRAV8-2A0A0B4J237 113 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms