RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 NXPH4O95158 308 aa13.24□□□□□ -0.29
CHUK-201ENST00000370397 TSPEAR-AS2P59090 65 aa13.24□□□□□ -0.29
CHUK-201ENST00000370397 SYT8Q8NBV8 401 aa13.24□□□□□ -0.29
CHUK-201ENST00000370397 KLHL30-AS1Q8NEE0 82 aa13.24□□□□□ -0.29
CHUK-201ENST00000370397 RNASE3P12724 160 aaKnown RBP13.23□□□□□ -0.29
CHUK-201ENST00000370397 CKS1BP61024 79 aa13.23□□□□□ -0.29
CHUK-201ENST00000370397 NDUFA11Q86Y39 141 aa13.23□□□□□ -0.29
CHUK-201ENST00000370397 PTPRZ1P23471 2315 aaPredicted RBP13.23□□□□□ -0.29
CHUK-201ENST00000370397 XGP55808 180 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 ECSCRQ19T08 205 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 ABCA4P78363 2273 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 ZNF815PA8K554 130 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 Q6ZS46 218 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 DPH3P1Q9H4G8 78 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 MRPL16Q9NX20 251 aaKnown RBP13.22□□□□□ -0.29
CHUK-201ENST00000370397 C11orf86A6NJI1 115 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 MT-ATP8P03928 68 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 C14orf178Q8N769 122 aaPredicted RBP13.22□□□□□ -0.29
CHUK-201ENST00000370397 PTH2Q96A98 100 aa13.22□□□□□ -0.29
CHUK-201ENST00000370397 DUSP14O95147 198 aaKnown RBP13.21□□□□□ -0.29
CHUK-201ENST00000370397 IGHV3-30P01768 117 aa13.21□□□□□ -0.29
CHUK-201ENST00000370397 IGHV3-30-5P0DP03 117 aa13.21□□□□□ -0.29
CHUK-201ENST00000370397 MED14OSP0DP75 135 aa13.21□□□□□ -0.29
CHUK-201ENST00000370397 CRYBA4P53673 196 aa13.21□□□□□ -0.3
CHUK-201ENST00000370397 DEFB1P60022 68 aa13.2□□□□□ -0.3
CHUK-201ENST00000370397 SPOCK3Q9BQ16 436 aa13.2□□□□□ -0.3
CHUK-201ENST00000370397 TRBV7-1A0A0A6YYK4 115 aa13.2□□□□□ -0.3
CHUK-201ENST00000370397 TCL1BO95988 128 aa13.2□□□□□ -0.3
CHUK-201ENST00000370397 Q6ZUT4 128 aa13.2□□□□□ -0.3
CHUK-201ENST00000370397 METTL26Q96S19 204 aa13.2□□□□□ -0.3
CHUK-201ENST00000370397 CFC1BP0CG36 223 aa13.2□□□□□ -0.3
CHUK-201ENST00000370397 CFC1P0CG37 223 aa13.2□□□□□ -0.3
CHUK-201ENST00000370397 RPL32P62910 135 aaKnown RBP13.2□□□□□ -0.3
CHUK-201ENST00000370397 ZNF418Q8TF45 676 aaPredicted RBP13.19□□□□□ -0.3
CHUK-201ENST00000370397 SVIPQ8NHG7 77 aa13.19□□□□□ -0.3
CHUK-201ENST00000370397 IGHV4OR15-8A0A075B7B6 117 aa13.19□□□□□ -0.3
CHUK-201ENST00000370397 A0A087WW49 117 aa13.19□□□□□ -0.3
CHUK-201ENST00000370397 TRAV26-1A0A087WT03 109 aa13.18□□□□□ -0.3
CHUK-201ENST00000370397 ANXA2RQ3ZCQ2 193 aa13.18□□□□□ -0.3
CHUK-201ENST00000370397 C9orf139Q6ZV77 190 aa13.18□□□□□ -0.3
CHUK-201ENST00000370397 TLN1Q9Y490 2541 aaKnown RBP13.18□□□□□ -0.3
CHUK-201ENST00000370397 POLR2KP53803 58 aaKnown RBP13.18□□□□□ -0.3
CHUK-201ENST00000370397 TEN1Q86WV5 123 aa13.18□□□□□ -0.3
CHUK-201ENST00000370397 ZNRF2Q8NHG8 242 aa13.18□□□□□ -0.3
CHUK-201ENST00000370397 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
CHUK-201ENST00000370397 UNQ9165/PRO28630Q6UXU0 137 aa13.17□□□□□ -0.3
CHUK-201ENST00000370397 LINC00477Q96M19 166 aa13.17□□□□□ -0.3
CHUK-201ENST00000370397 SPTBN2O15020 2390 aa13.17□□□□□ -0.3
CHUK-201ENST00000370397 CACNA1BQ00975 2339 aa13.17□□□□□ -0.3
CHUK-201ENST00000370397 C5orf56Q8N8D9 126 aa13.17□□□□□ -0.3
CHUK-201ENST00000370397 SLC25A29Q8N8R3 303 aa13.17□□□□□ -0.3
CHUK-201ENST00000370397 TIMD4Q96H15 378 aa13.17□□□□□ -0.3
CHUK-201ENST00000370397 TMEM238LA0A1B0GVL6 79 aa13.16□□□□□ -0.3
CHUK-201ENST00000370397 A6NJY4 79 aa13.16□□□□□ -0.3
CHUK-201ENST00000370397 GNRH2O43555 120 aa13.16□□□□□ -0.3
CHUK-201ENST00000370397 PSMB2P49721 201 aa13.16□□□□□ -0.3
CHUK-201ENST00000370397 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
CHUK-201ENST00000370397 IGHV1-69DA0A0B4J2H0 117 aa13.16□□□□□ -0.3
CHUK-201ENST00000370397 C16orf92Q96LL3 132 aa13.16□□□□□ -0.3
CHUK-201ENST00000370397 TRAV21A0A0B4J279 112 aa13.15□□□□□ -0.3
CHUK-201ENST00000370397 UBE2E1P51965 193 aa13.15□□□□□ -0.3
CHUK-201ENST00000370397 K7ENP7 123 aa13.15□□□□□ -0.3
CHUK-201ENST00000370397 CRIP2P52943 208 aaPredicted RBP13.15□□□□□ -0.3
CHUK-201ENST00000370397 GEMIN7Q9H840 131 aaKnown RBP13.15□□□□□ -0.3
CHUK-201ENST00000370397 TRBV12-3P01733 135 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 A0A1W2PPR1 153 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 SPINK8P0C7L1 97 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 SAA4P35542 130 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 PPDPFLQ8WWR9 84 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 ABCA2Q9BZC7 2435 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 FAM90A27PA6NNH2 459 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 J3KRW8 73 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 ASIPP42127 132 aa13.14□□□□□ -0.31
CHUK-201ENST00000370397 RPL39P62891 51 aaKnown RBP13.13□□□□□ -0.31
CHUK-201ENST00000370397 ZNF876PQ49A33 203 aa13.13□□□□□ -0.31
CHUK-201ENST00000370397 TP53TG1Q9Y2A0 90 aa13.13□□□□□ -0.31
CHUK-201ENST00000370397 CRYBG3Q68DQ2 2970 aa13.13□□□□□ -0.31
CHUK-201ENST00000370397 EMP1P54849 157 aa13.13□□□□□ -0.31
CHUK-201ENST00000370397 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
CHUK-201ENST00000370397 SCGB1D4Q6XE38 83 aa13.13□□□□□ -0.31
CHUK-201ENST00000370397 PHLDA3Q9Y5J5 127 aa13.12□□□□□ -0.31
CHUK-201ENST00000370397 COL12A1Q99715 3063 aa13.12□□□□□ -0.31
CHUK-201ENST00000370397 M0QXV9 152 aa13.12□□□□□ -0.31
CHUK-201ENST00000370397 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
CHUK-201ENST00000370397 F6UB75 175 aa13.12□□□□□ -0.31
CHUK-201ENST00000370397 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
CHUK-201ENST00000370397 UCNP55089 124 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 SRSF9Q13242 221 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHUK-201ENST00000370397 PMVKQ15126 192 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 TIMM17AQ99595 171 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 KIR2DL4Q99706 377 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 JPT2Q9H910 190 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 LINC01600Q96MT4 127 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 CITED1Q99966 193 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 TRBV7-9A0A0J9YWB2 115 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 OVOL1O14753 267 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 MGPP08493 103 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 ANKRD29Q8N6D5 301 aa13.11□□□□□ -0.31
CHUK-201ENST00000370397 PIEZO1Q92508 2521 aa13.1□□□□□ -0.31
CHUK-201ENST00000370397 TRBV20-1A0A075B6N2 111 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms