RNA–Protein interactions for RNA: ENST00000370206.8

CNN3-201, Transcript of calponin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-201ENST00000370206 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.48■□□□□ 0.23
CNN3-201ENST00000370206 ZC2HC1BQ5TFG8 222 aa16.48■□□□□ 0.23
CNN3-201ENST00000370206 CELSR2Q9HCU4 2923 aa16.48■□□□□ 0.23
CNN3-201ENST00000370206 PPP1R17O96001 155 aa16.48■□□□□ 0.23
CNN3-201ENST00000370206 LGALS1P09382 135 aaKnown RBP16.48■□□□□ 0.23
CNN3-201ENST00000370206 TOMM6Q96B49 74 aa16.48■□□□□ 0.23
CNN3-201ENST00000370206 A6NDN8 102 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 ZNF688P0C7X2 276 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 GTSCR1Q86UQ5 136 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 OR4C5Q8NGB2 326 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 TMEM160Q9NX00 188 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 KIF25-AS1Q9Y6Z4 181 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 ELANEP08246 267 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 HLA-DRB4P13762 266 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 Q6YL49 198 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 HIGD1BQ9P298 99 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 HLA-DRB4X5D2U9 266 aa16.47■□□□□ 0.23
CNN3-201ENST00000370206 MYO18BQ8IUG5 2567 aa16.46■□□□□ 0.23
CNN3-201ENST00000370206 TRAV12-1A0A0B4J245 112 aa16.46■□□□□ 0.23
CNN3-201ENST00000370206 K7EQG2 157 aa16.46■□□□□ 0.23
CNN3-201ENST00000370206 IGHV4-31P0DP07 118 aa16.46■□□□□ 0.23
CNN3-201ENST00000370206 LINC00315P59091 139 aa16.46■□□□□ 0.23
CNN3-201ENST00000370206 SNRPD3P62318 126 aaKnown RBP16.46■□□□□ 0.23
CNN3-201ENST00000370206 WFDC12Q8WWY7 111 aa16.46■□□□□ 0.23
CNN3-201ENST00000370206 ZNF702PQ9H963 129 aa16.46■□□□□ 0.23
CNN3-201ENST00000370206 MUC4Q99102 2169 aa16.46■□□□□ 0.23
CNN3-201ENST00000370206 TRAV12-3A0A0B4J271 114 aa16.45■□□□□ 0.22
CNN3-201ENST00000370206 LGALS9O00182 355 aa16.45■□□□□ 0.22
CNN3-201ENST00000370206 AMMECR1LQ6DCA0 310 aa16.45■□□□□ 0.22
CNN3-201ENST00000370206 TRAV8-6A0A0B4J262 113 aa16.45■□□□□ 0.22
CNN3-201ENST00000370206 A0A0J9YX75 114 aa16.45■□□□□ 0.22
CNN3-201ENST00000370206 PLNP26678 52 aa16.45■□□□□ 0.22
CNN3-201ENST00000370206 SYNJ2BPP57105 145 aa16.45■□□□□ 0.22
CNN3-201ENST00000370206 BBC3Q96PG8 261 aaPredicted RBP16.45■□□□□ 0.22
CNN3-201ENST00000370206 SCGB3A1Q96QR1 104 aa16.45■□□□□ 0.22
CNN3-201ENST00000370206 H3BRM9 83 aa16.44■□□□□ 0.22
CNN3-201ENST00000370206 TTTY13Q9BZ97 58 aa16.44■□□□□ 0.22
CNN3-201ENST00000370206 IGHV4OR15-8A0A075B7B6 117 aa16.44■□□□□ 0.22
CNN3-201ENST00000370206 A0A087WW49 117 aa16.44■□□□□ 0.22
CNN3-201ENST00000370206 CD7P09564 240 aa16.44■□□□□ 0.22
CNN3-201ENST00000370206 MAP1AP78559 2803 aaPredicted RBP16.43■□□□□ 0.22
CNN3-201ENST00000370206 ANKRD17O75179 2603 aaKnown RBP16.43■□□□□ 0.22
CNN3-201ENST00000370206 F8VRH5 84 aa16.43■□□□□ 0.22
CNN3-201ENST00000370206 H7C1H1 209 aa16.43■□□□□ 0.22
CNN3-201ENST00000370206 UBE2E2Q96LR5 201 aa16.43■□□□□ 0.22
CNN3-201ENST00000370206 CSTL1Q9H114 145 aa16.43■□□□□ 0.22
CNN3-201ENST00000370206 RPL32P62910 135 aaKnown RBP16.42■□□□□ 0.22
CNN3-201ENST00000370206 K7EP13 123 aa16.41■□□□□ 0.22
CNN3-201ENST00000370206 C2orf66Q6UXQ4 117 aa16.41■□□□□ 0.22
CNN3-201ENST00000370206 RNF152Q8N8N0 203 aa16.41■□□□□ 0.22
CNN3-201ENST00000370206 USP9YO00507 2555 aaPredicted RBP16.41■□□□□ 0.22
CNN3-201ENST00000370206 CRYBG3Q68DQ2 2970 aa16.41■□□□□ 0.22
CNN3-201ENST00000370206 HOXD3P31249 432 aaPredicted RBP16.41■□□□□ 0.22
CNN3-201ENST00000370206 NEXN-AS1Q8NBZ9 246 aa16.41■□□□□ 0.22
CNN3-201ENST00000370206 C9orf85Q96MD7 179 aa16.41■□□□□ 0.22
CNN3-201ENST00000370206 C9orf118A6NHY6 69 aa16.4■□□□□ 0.22
CNN3-201ENST00000370206 CHAC1Q9BUX1 264 aa16.4■□□□□ 0.22
CNN3-201ENST00000370206 JPT2Q9H910 190 aa16.4■□□□□ 0.22
CNN3-201ENST00000370206 UTP20O75691 2785 aaKnown RBP16.4■□□□□ 0.22
CNN3-201ENST00000370206 TRBV25-1A0A075B6N4 114 aa16.4■□□□□ 0.22
CNN3-201ENST00000370206 IGHV3-16A0A0C4DH30 117 aa16.4■□□□□ 0.22
CNN3-201ENST00000370206 HOXA3O43365 443 aaPredicted RBP16.4■□□□□ 0.22
CNN3-201ENST00000370206 CHTOPQ9Y3Y2 248 aaKnown RBP16.4■□□□□ 0.22
CNN3-201ENST00000370206 CR1P17927 2039 aa16.39■□□□□ 0.21
CNN3-201ENST00000370206 KRTAP10-9P60411 292 aa16.39■□□□□ 0.21
CNN3-201ENST00000370206 SUMO4Q6EEV6 95 aa16.39■□□□□ 0.21
CNN3-201ENST00000370206 ZNF843Q8N446 348 aa16.39■□□□□ 0.21
CNN3-201ENST00000370206 BEX4Q9NWD9 120 aaPredicted RBP16.39■□□□□ 0.21
CNN3-201ENST00000370206 FBN2P35556 2912 aa16.39■□□□□ 0.21
CNN3-201ENST00000370206 TRAV12-2A0A075B6T6 113 aa16.38■□□□□ 0.21
CNN3-201ENST00000370206 IGKV3-20P01619 116 aa16.38■□□□□ 0.21
CNN3-201ENST00000370206 USP24Q9UPU5 2620 aa16.38■□□□□ 0.21
CNN3-201ENST00000370206 DUX5Q96PT3 197 aa16.38■□□□□ 0.21
CNN3-201ENST00000370206 FAM208BQ5VWN6 2430 aa16.38■□□□□ 0.21
CNN3-201ENST00000370206 ZNF462Q96JM2 2506 aa16.38■□□□□ 0.21
CNN3-201ENST00000370206 DUSP14O95147 198 aaKnown RBP16.37■□□□□ 0.21
CNN3-201ENST00000370206 CDKN1BP46527 198 aa16.37■□□□□ 0.21
CNN3-201ENST00000370206 BAALCQ8WXS3 180 aa16.37■□□□□ 0.21
CNN3-201ENST00000370206 A0A087WWL8 130 aa16.37■□□□□ 0.21
CNN3-201ENST00000370206 DEFB113Q30KQ7 82 aa16.37■□□□□ 0.21
CNN3-201ENST00000370206 POLR2KP53803 58 aaKnown RBP16.36■□□□□ 0.21
CNN3-201ENST00000370206 Q5PR19 223 aa16.36■□□□□ 0.21
CNN3-201ENST00000370206 NEGR1Q7Z3B1 354 aa16.36■□□□□ 0.21
CNN3-201ENST00000370206 MAPKAPK5-AS1Q8N8E1 139 aa16.36■□□□□ 0.21
CNN3-201ENST00000370206 SPINK13Q1W4C9 94 aa16.36■□□□□ 0.21
CNN3-201ENST00000370206 FOXI2Q6ZQN5 318 aa16.36■□□□□ 0.21
CNN3-201ENST00000370206 MDFICQ9P1T7 246 aa16.36■□□□□ 0.21
CNN3-201ENST00000370206 IGHV1OR15-1A0A075B7D0 117 aa16.35■□□□□ 0.21
CNN3-201ENST00000370206 GCSHP23434 173 aa16.35■□□□□ 0.21
CNN3-201ENST00000370206 LRRC75A-AS1Q8N1F1 130 aa16.35■□□□□ 0.21
CNN3-201ENST00000370206 Q8N1Y9 231 aa16.35■□□□□ 0.21
CNN3-201ENST00000370206 RNASE8Q8TDE3 154 aaKnown RBP16.35■□□□□ 0.21
CNN3-201ENST00000370206 JMJD8Q96S16 334 aa16.35■□□□□ 0.21
CNN3-201ENST00000370206 CSMD2Q7Z408 3487 aa16.35■□□□□ 0.21
CNN3-201ENST00000370206 POLQO75417 2590 aa16.34■□□□□ 0.21
CNN3-201ENST00000370206 SYT8Q8NBV8 401 aa16.34■□□□□ 0.21
CNN3-201ENST00000370206 PRRC2AP48634 2157 aaKnown RBP16.34■□□□□ 0.21
CNN3-201ENST00000370206 DOPEY2Q9Y3R5 2298 aa16.34■□□□□ 0.21
CNN3-201ENST00000370206 F5H697 171 aa16.34■□□□□ 0.21
CNN3-201ENST00000370206 H3BUT2 72 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms