RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 VCX2Q9H322 139 aa14.39□□□□□ -0.11
PRPF39-201ENST00000355765 CCDC179H3BU77 68 aa14.38□□□□□ -0.11
PRPF39-201ENST00000355765 CEP295Q9C0D2 2601 aa14.38□□□□□ -0.11
PRPF39-201ENST00000355765 IGHV3-30P01768 117 aa14.38□□□□□ -0.11
PRPF39-201ENST00000355765 CLEC3BP05452 202 aa14.38□□□□□ -0.11
PRPF39-201ENST00000355765 IGHV3-30-5P0DP03 117 aa14.38□□□□□ -0.11
PRPF39-201ENST00000355765 IGHV4-4A0A075B6R2 117 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 RNF223E7ERA6 249 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 TMEM262E9PQX1 116 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 NBL1P41271 181 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 RELNP78509 3460 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 GAGE2BQ13066 116 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 C15orf32Q32M92 178 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 GAGE2EQ4V326 116 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 GAGE2DQ9UEU5 116 aa14.37□□□□□ -0.11
PRPF39-201ENST00000355765 IGLV4-69A0A075B6H9 119 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 SCGB2A1O75556 95 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 S100A4P26447 101 aaKnown RBP14.36□□□□□ -0.11
PRPF39-201ENST00000355765 ARL3P36405 182 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 ZFAND3Q9H8U3 227 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 PRO1854Q9UHT4 67 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 PIEZO2Q9H5I5 2752 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 SNCGO76070 127 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 TMEM170BQ5T4T1 132 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 LY6HO94772 140 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 NDUFV3P56181 108 aaKnown RBP14.36□□□□□ -0.11
PRPF39-201ENST00000355765 DEFB1P60022 68 aa14.36□□□□□ -0.11
PRPF39-201ENST00000355765 ACACAQ13085 2346 aa14.35□□□□□ -0.11
PRPF39-201ENST00000355765 TSHBP01222 138 aa14.35□□□□□ -0.11
PRPF39-201ENST00000355765 ECSCRQ19T08 205 aa14.35□□□□□ -0.11
PRPF39-201ENST00000355765 RHODO00212 210 aa14.35□□□□□ -0.11
PRPF39-201ENST00000355765 FAM57AQ8TBR7 257 aa14.35□□□□□ -0.11
PRPF39-201ENST00000355765 NTN5Q8WTR8 489 aaPredicted RBP14.35□□□□□ -0.11
PRPF39-201ENST00000355765 CLPSL1A2RUU4 121 aa14.34□□□□□ -0.11
PRPF39-201ENST00000355765 HERVK_113P61574 105 aa14.34□□□□□ -0.11
PRPF39-201ENST00000355765 RPL39P62891 51 aaKnown RBP14.34□□□□□ -0.11
PRPF39-201ENST00000355765 DPH3P1Q9H4G8 78 aa14.34□□□□□ -0.11
PRPF39-201ENST00000355765 TP53TG1Q9Y2A0 90 aa14.34□□□□□ -0.11
PRPF39-201ENST00000355765 SRD5A1P18405 259 aa14.34□□□□□ -0.11
PRPF39-201ENST00000355765 CLEC19AQ6UXS0 136 aa14.34□□□□□ -0.11
PRPF39-201ENST00000355765 ANKRD11Q6UB99 2663 aaPredicted RBP14.34□□□□□ -0.11
PRPF39-201ENST00000355765 SHISA2Q6UWI4 295 aa14.33□□□□□ -0.11
PRPF39-201ENST00000355765 PHLDA3Q9Y5J5 127 aa14.33□□□□□ -0.11
PRPF39-201ENST00000355765 EIF4EBP3O60516 100 aaPredicted RBP14.33□□□□□ -0.12
PRPF39-201ENST00000355765 C1orf122Q6ZSJ8 110 aa14.33□□□□□ -0.12
PRPF39-201ENST00000355765 A4D1N5 150 aa14.32□□□□□ -0.12
PRPF39-201ENST00000355765 ELANEP08246 267 aa14.32□□□□□ -0.12
PRPF39-201ENST00000355765 TTC32Q5I0X7 151 aa14.32□□□□□ -0.12
PRPF39-201ENST00000355765 SMIM20Q8N5G0 67 aa14.32□□□□□ -0.12
PRPF39-201ENST00000355765 SLC25A29Q8N8R3 303 aa14.32□□□□□ -0.12
PRPF39-201ENST00000355765 TIMD4Q96H15 378 aa14.32□□□□□ -0.12
PRPF39-201ENST00000355765 BEX4Q9NWD9 120 aaPredicted RBP14.32□□□□□ -0.12
PRPF39-201ENST00000355765 IGHV7-81A0A0B4J1V7 117 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 HERV-K104P63124 156 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 ASH1LQ9NR48 2969 aaKnown RBP14.31□□□□□ -0.12
PRPF39-201ENST00000355765 GAGE12JA6NER3 117 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 GAGE7O76087 117 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 IGHV4-39P01824 125 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 GAGE12FP0CL80 117 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 GAGE12GP0CL81 117 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 GAGE12IP0CL82 117 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 GAGE4Q13068 117 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 C9orf47Q6ZRZ4 202 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 Q8N1Y9 231 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 C16orf92Q96LL3 132 aa14.31□□□□□ -0.12
PRPF39-201ENST00000355765 TRBV7-9A0A0J9YWB2 115 aa14.3□□□□□ -0.12
PRPF39-201ENST00000355765 IGHV3-64A0A075B6Q5 118 aa14.3□□□□□ -0.12
PRPF39-201ENST00000355765 TRAV2A0A0B4J234 112 aa14.29□□□□□ -0.12
PRPF39-201ENST00000355765 TEX49A0A1B0GTD5 131 aa14.29□□□□□ -0.12
PRPF39-201ENST00000355765 Q1RN00 199 aa14.29□□□□□ -0.12
PRPF39-201ENST00000355765 ZNRF2Q8NHG8 242 aa14.29□□□□□ -0.12
PRPF39-201ENST00000355765 C20orf173Q96LM9 149 aa14.29□□□□□ -0.12
PRPF39-201ENST00000355765 GNRH2O43555 120 aa14.29□□□□□ -0.12
PRPF39-201ENST00000355765 IFITM1P13164 125 aa14.29□□□□□ -0.12
PRPF39-201ENST00000355765 BSNQ9UPA5 3926 aa14.29□□□□□ -0.12
PRPF39-201ENST00000355765 IGHV3-33P01772 117 aa14.28□□□□□ -0.12
PRPF39-201ENST00000355765 GPHB5Q86YW7 130 aa14.28□□□□□ -0.12
PRPF39-201ENST00000355765 ASIPP42127 132 aa14.28□□□□□ -0.12
PRPF39-201ENST00000355765 PMVKQ15126 192 aa14.28□□□□□ -0.12
PRPF39-201ENST00000355765 J3QQQ9 107 aa14.28□□□□□ -0.12
PRPF39-201ENST00000355765 FAM159AQ6UWV7 190 aa14.28□□□□□ -0.12
PRPF39-201ENST00000355765 CCDC140Q96MF4 163 aa14.28□□□□□ -0.12
PRPF39-201ENST00000355765 AMELXQ99217 191 aa14.28□□□□□ -0.12
PRPF39-201ENST00000355765 LGALS3P17931 250 aaKnown RBP14.27□□□□□ -0.12
PRPF39-201ENST00000355765 CFAP161Q6P656 301 aa14.27□□□□□ -0.12
PRPF39-201ENST00000355765 METTL26Q96S19 204 aa14.27□□□□□ -0.13
PRPF39-201ENST00000355765 IGIPA6NJ69 53 aa14.26□□□□□ -0.13
PRPF39-201ENST00000355765 G3V318 75 aa14.26□□□□□ -0.13
PRPF39-201ENST00000355765 IGF2-ASQ6U949 168 aa14.26□□□□□ -0.13
PRPF39-201ENST00000355765 JPT2Q9H910 190 aa14.26□□□□□ -0.13
PRPF39-201ENST00000355765 C15orf53Q8NAA6 179 aa14.26□□□□□ -0.13
PRPF39-201ENST00000355765 LY6G5BQ8NDX9 201 aa14.26□□□□□ -0.13
PRPF39-201ENST00000355765 RPL32P62910 135 aaKnown RBP14.25□□□□□ -0.13
PRPF39-201ENST00000355765 ZFAND2AQ8N6M9 145 aa14.25□□□□□ -0.13
PRPF39-201ENST00000355765 TMEM263Q8WUH6 116 aaKnown RBP14.25□□□□□ -0.13
PRPF39-201ENST00000355765 ODF3Q96PU9 254 aa14.25□□□□□ -0.13
PRPF39-201ENST00000355765 OPRPNQ99935 248 aaPredicted RBP14.25□□□□□ -0.13
PRPF39-201ENST00000355765 B9A039 149 aa14.25□□□□□ -0.13
PRPF39-201ENST00000355765 RNASE4P34096 147 aaKnown RBP14.25□□□□□ -0.13
PRPF39-201ENST00000355765 VMO1Q7Z5L0 202 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms