RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 SLC50A1Q9BRV3 221 aa12.71□□□□□ -0.38
CDC42EP4-201ENST00000335793 IGKCP01834 107 aa12.7□□□□□ -0.38
CDC42EP4-201ENST00000335793 RNF185Q96GF1 192 aa12.7□□□□□ -0.38
CDC42EP4-201ENST00000335793 AJUBAQ96IF1 538 aa12.7□□□□□ -0.38
CDC42EP4-201ENST00000335793 BPESC1Q9GZL8 116 aa12.7□□□□□ -0.38
CDC42EP4-201ENST00000335793 TRAV40A0A0B4J280 105 aa12.7□□□□□ -0.38
CDC42EP4-201ENST00000335793 IGKV3D-20A0A0C4DH25 116 aa12.7□□□□□ -0.38
CDC42EP4-201ENST00000335793 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDC42EP4-201ENST00000335793 FBXL19-AS1Q494R0 122 aa12.69□□□□□ -0.38
CDC42EP4-201ENST00000335793 ZFP2Q6ZN57 461 aa12.69□□□□□ -0.38
CDC42EP4-201ENST00000335793 DEFB104AQ8WTQ1 72 aa12.69□□□□□ -0.38
CDC42EP4-201ENST00000335793 PRO0461Q9UI25 63 aa12.69□□□□□ -0.38
CDC42EP4-201ENST00000335793 TMEM8BA6NDV4 472 aa12.69□□□□□ -0.38
CDC42EP4-201ENST00000335793 GAGE2BQ13066 116 aa12.69□□□□□ -0.38
CDC42EP4-201ENST00000335793 GAGE2EQ4V326 116 aa12.69□□□□□ -0.38
CDC42EP4-201ENST00000335793 GAGE2DQ9UEU5 116 aa12.69□□□□□ -0.38
CDC42EP4-201ENST00000335793 IGHV3-11P01762 117 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 SMCPP49901 116 aaPredicted RBP12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 LY6EQ16553 131 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 DEFB1P60022 68 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 MRPL23Q16540 153 aaKnown RBP12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 BRD3OSQ6XYD6 125 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 Q8N6K4 173 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 DPF1Q92782 380 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 C11orf21Q9P2W6 132 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 MYO18BQ8IUG5 2567 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 MGPP08493 103 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 EFNA4P52798 201 aa12.68□□□□□ -0.38
CDC42EP4-201ENST00000335793 DPM2O94777 84 aa12.67□□□□□ -0.38
CDC42EP4-201ENST00000335793 UBE2E1P51965 193 aa12.67□□□□□ -0.38
CDC42EP4-201ENST00000335793 SORL1Q92673 2214 aa12.67□□□□□ -0.38
CDC42EP4-201ENST00000335793 MEIG1Q5JSS6 88 aa12.67□□□□□ -0.38
CDC42EP4-201ENST00000335793 CCDC140Q96MF4 163 aa12.67□□□□□ -0.38
CDC42EP4-201ENST00000335793 HRNRQ86YZ3 2850 aaPredicted RBP12.67□□□□□ -0.38
CDC42EP4-201ENST00000335793 TRAV4A0A0B4J268 109 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 MAPKAPK5-AS1Q8N8E1 139 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 ZFAND3Q9H8U3 227 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 MRPL35Q9NZE8 188 aaKnown RBP12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 A0A1W2PPR1 153 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 NDUFV3P56181 108 aaKnown RBP12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 PAX8Q06710 450 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 RRN3P1Q2M238 152 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 C11orf71Q6IPW1 123 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 SIRPDQ9H106 197 aa12.66□□□□□ -0.38
CDC42EP4-201ENST00000335793 LY6DQ14210 128 aa12.65□□□□□ -0.38
CDC42EP4-201ENST00000335793 LAGE3Q14657 143 aa12.65□□□□□ -0.38
CDC42EP4-201ENST00000335793 CARD19Q96LW7 228 aa12.65□□□□□ -0.38
CDC42EP4-201ENST00000335793 CHD6Q8TD26 2715 aa12.65□□□□□ -0.38
CDC42EP4-201ENST00000335793 CRLF1O75462 422 aa12.65□□□□□ -0.38
CDC42EP4-201ENST00000335793 ATP5LO75964 103 aa12.65□□□□□ -0.38
CDC42EP4-201ENST00000335793 EBI3Q14213 229 aa12.65□□□□□ -0.38
CDC42EP4-201ENST00000335793 Q8N8P6 123 aa12.65□□□□□ -0.38
CDC42EP4-201ENST00000335793 TRAV8-2A0A0B4J237 113 aa12.64□□□□□ -0.39
CDC42EP4-201ENST00000335793 NPFFO15130 113 aa12.64□□□□□ -0.39
CDC42EP4-201ENST00000335793 VPREB3Q9UKI3 123 aa12.64□□□□□ -0.39
CDC42EP4-201ENST00000335793 PHLDA3Q9Y5J5 127 aa12.64□□□□□ -0.39
CDC42EP4-201ENST00000335793 SNCGO76070 127 aa12.64□□□□□ -0.39
CDC42EP4-201ENST00000335793 IGF1P05019 195 aa12.64□□□□□ -0.39
CDC42EP4-201ENST00000335793 IGSF10Q6WRI0 2623 aa12.64□□□□□ -0.39
CDC42EP4-201ENST00000335793 SRD5A1P18405 259 aa12.64□□□□□ -0.39
CDC42EP4-201ENST00000335793 FAM208BQ5VWN6 2430 aa12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 TRAV41A0A0B4J266 112 aa12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 CENPVL3A0A0U1RRI6 287 aa12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 OR10J6PQ8NGY7 276 aa12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 SRSF1Q07955 248 aaKnown RBP eCLIP12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 C14orf178Q8N769 122 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 CFAP46Q8IYW2 2715 aa12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 TRBV7-1A0A0A6YYK4 115 aa12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 CLPSL1A2RUU4 121 aa12.63□□□□□ -0.39
CDC42EP4-201ENST00000335793 LINC01549A6NIU2 74 aa12.62□□□□□ -0.39
CDC42EP4-201ENST00000335793 COX8CQ7Z4L0 72 aa12.62□□□□□ -0.39
CDC42EP4-201ENST00000335793 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
CDC42EP4-201ENST00000335793 SCGB3A1Q96QR1 104 aa12.61□□□□□ -0.39
CDC42EP4-201ENST00000335793 F6UB75 175 aa12.61□□□□□ -0.39
CDC42EP4-201ENST00000335793 CFAP126Q5VTH2 177 aa12.61□□□□□ -0.39
CDC42EP4-201ENST00000335793 LOC107984640A0A0U1RRK4 108 aa12.61□□□□□ -0.39
CDC42EP4-201ENST00000335793 ZNF462Q96JM2 2506 aa12.61□□□□□ -0.39
CDC42EP4-201ENST00000335793 CENPEQ02224 2701 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 RBAKDNA6NC62 111 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 HOXA3O43365 443 aaPredicted RBP12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 SCGB1C2P0DMR2 95 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 IFITM1P13164 125 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 DLX4Q92988 240 aaPredicted RBP12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 HHLA3Q9XRX5 114 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 A0A087WX48 190 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 TRBV12-3P01733 135 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 ZNF575Q86XF7 245 aa12.6□□□□□ -0.39
CDC42EP4-201ENST00000335793 UCNP55089 124 aa12.59□□□□□ -0.39
CDC42EP4-201ENST00000335793 PPDPFLQ8WWR9 84 aa12.59□□□□□ -0.39
CDC42EP4-201ENST00000335793 CNFNQ9BYD5 112 aa12.59□□□□□ -0.39
CDC42EP4-201ENST00000335793 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
CDC42EP4-201ENST00000335793 UNQ9165/PRO28630Q6UXU0 137 aa12.59□□□□□ -0.39
CDC42EP4-201ENST00000335793 FASNP49327 2511 aaKnown RBP12.59□□□□□ -0.39
CDC42EP4-201ENST00000335793 F5H697 171 aa12.59□□□□□ -0.39
CDC42EP4-201ENST00000335793 ZNF688P0C7X2 276 aa12.59□□□□□ -0.39
CDC42EP4-201ENST00000335793 H7C2G1 150 aa12.58□□□□□ -0.4
CDC42EP4-201ENST00000335793 PRR9Q5T870 116 aa12.58□□□□□ -0.4
CDC42EP4-201ENST00000335793 C5orf56Q8N8D9 126 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms