RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ZNF747Q9BV97 191 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 A0A1W2PRX2 142 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 PGPA6NDG6 321 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 ZNF785A8K8V0 405 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 H3BUT2 72 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 EDN2P20800 178 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 ERASQ7Z444 233 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 SLC50A1Q9BRV3 221 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 PEMTQ9UBM1 199 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 NPIPB6E9PJ23 425 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 SMIM13P0DJ93 91 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 HLA-DRB4P13762 266 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 ADAMTSL5Q6ZMM2 481 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 EXOC3-AS1Q8N2X6 119 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 FMC1Q96HJ9 113 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 CITED1Q99966 193 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 MLST8Q9BVC4 326 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 HLA-DRB4X5D2U9 266 aa9.63□□□□□ -0.87
DDX39A-202ENST00000324340 C19orf71A6NCJ1 209 aa9.62□□□□□ -0.87
DDX39A-202ENST00000324340 CSN3P07498 182 aa9.62□□□□□ -0.87
DDX39A-202ENST00000324340 KRTAP24-1Q3LI83 254 aa9.62□□□□□ -0.87
DDX39A-202ENST00000324340 Q6AWC8 147 aa9.62□□□□□ -0.87
DDX39A-202ENST00000324340 PRIMA1Q86XR5 153 aa9.62□□□□□ -0.87
DDX39A-202ENST00000324340 MRAP2Q96G30 205 aa9.62□□□□□ -0.87
DDX39A-202ENST00000324340 AAMDCQ9H7C9 122 aa9.62□□□□□ -0.87
DDX39A-202ENST00000324340 AP5S1Q9NUS5 200 aa9.62□□□□□ -0.87
DDX39A-202ENST00000324340 TRAV8-2A0A0B4J237 113 aa9.61□□□□□ -0.87
DDX39A-202ENST00000324340 GAGE12HA6NDE8 117 aa9.61□□□□□ -0.87
DDX39A-202ENST00000324340 SOCS3O14543 225 aa9.61□□□□□ -0.87
DDX39A-202ENST00000324340 TCRAP04437 139 aa9.61□□□□□ -0.87
DDX39A-202ENST00000324340 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
DDX39A-202ENST00000324340 CAMPP49913 170 aa9.61□□□□□ -0.87
DDX39A-202ENST00000324340 SAMD5Q5TGI4 173 aa9.61□□□□□ -0.87
DDX39A-202ENST00000324340 P01737 135 aa9.6□□□□□ -0.87
DDX39A-202ENST00000324340 GNG5P63218 68 aa9.6□□□□□ -0.87
DDX39A-202ENST00000324340 RIGQ13278 110 aa9.6□□□□□ -0.87
DDX39A-202ENST00000324340 NSUN5P1Q3KNT7 163 aa9.6□□□□□ -0.87
DDX39A-202ENST00000324340 LINC00173Q6ZV60 143 aa9.6□□□□□ -0.87
DDX39A-202ENST00000324340 MRPL53Q96EL3 112 aaKnown RBP9.6□□□□□ -0.87
DDX39A-202ENST00000324340 VGLL1Q99990 258 aa9.6□□□□□ -0.87
DDX39A-202ENST00000324340 OVOL1O14753 267 aa9.59□□□□□ -0.87
DDX39A-202ENST00000324340 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
DDX39A-202ENST00000324340 TAL2Q16559 108 aa9.59□□□□□ -0.87
DDX39A-202ENST00000324340 DCANP1Q8TF63 244 aa9.59□□□□□ -0.87
DDX39A-202ENST00000324340 SERTM2A0A1B0GWG4 89 aa9.58□□□□□ -0.88
DDX39A-202ENST00000324340 M0R3E3 92 aa9.58□□□□□ -0.88
DDX39A-202ENST00000324340 LTAP01374 205 aa9.58□□□□□ -0.88
DDX39A-202ENST00000324340 CKS1BP61024 79 aa9.58□□□□□ -0.88
DDX39A-202ENST00000324340 GTSF1Q8WW33 167 aa9.58□□□□□ -0.88
DDX39A-202ENST00000324340 DAZAP1Q96EP5 407 aaKnown RBP9.58□□□□□ -0.88
DDX39A-202ENST00000324340 VCX2Q9H322 139 aa9.58□□□□□ -0.88
DDX39A-202ENST00000324340 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.882e-7■□□□□ 8.1
DDX39A-202ENST00000324340 TEX48A0A1B0GUV7 120 aa9.57□□□□□ -0.88
DDX39A-202ENST00000324340 IGLV2-11P01706 119 aa9.57□□□□□ -0.88
DDX39A-202ENST00000324340 HLA-DMBP28068 263 aa9.57□□□□□ -0.88
DDX39A-202ENST00000324340 RPL11P62913 178 aaKnown RBP9.57□□□□□ -0.88
DDX39A-202ENST00000324340 RPL24P83731 157 aaKnown RBP9.57□□□□□ -0.88
DDX39A-202ENST00000324340 IGFL4Q6B9Z1 124 aa9.57□□□□□ -0.88
DDX39A-202ENST00000324340 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
DDX39A-202ENST00000324340 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
DDX39A-202ENST00000324340 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
DDX39A-202ENST00000324340 CLUHP3Q96NS8 147 aa9.57□□□□□ -0.88
DDX39A-202ENST00000324340 SPANXB1Q9NS25 103 aaPredicted RBP9.57□□□□□ -0.88
DDX39A-202ENST00000324340 TRAV2A0A0B4J234 112 aa9.56□□□□□ -0.88
DDX39A-202ENST00000324340 OR11H12B2RN74 326 aa9.56□□□□□ -0.88
DDX39A-202ENST00000324340 K7EQG2 157 aa9.56□□□□□ -0.88
DDX39A-202ENST00000324340 DEFB114Q30KQ6 69 aa9.56□□□□□ -0.88
DDX39A-202ENST00000324340 RNF182Q8N6D2 247 aa9.56□□□□□ -0.88
DDX39A-202ENST00000324340 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
DDX39A-202ENST00000324340 OR11H2Q8NH07 326 aa9.56□□□□□ -0.88
DDX39A-202ENST00000324340 MRPL16Q9NX20 251 aaKnown RBP9.56□□□□□ -0.88
DDX39A-202ENST00000324340 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
DDX39A-202ENST00000324340 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
DDX39A-202ENST00000324340 K7EQM0 130 aa9.55□□□□□ -0.88
DDX39A-202ENST00000324340 ZNF493Q6ZR52 646 aa9.55□□□□□ -0.88
DDX39A-202ENST00000324340 GOLT1AQ6ZVE7 132 aa9.55□□□□□ -0.88
DDX39A-202ENST00000324340 LINC00482Q8N8I6 264 aa9.55□□□□□ -0.88
DDX39A-202ENST00000324340 C20orf173Q96LM9 149 aa9.55□□□□□ -0.88
DDX39A-202ENST00000324340 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
DDX39A-202ENST00000324340 U3KQK5 164 aa9.55□□□□□ -0.88
DDX39A-202ENST00000324340 TRAV25A0A0B4J276 109 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 A0A1B0GUT8 65 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 E9PLD3 99 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 ID1P41134 155 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 SMAGPQ0VAQ4 97 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 TMEM61Q8N0U2 210 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 DYNLRB2Q8TF09 96 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 GTSF1LQ9H1H1 148 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 SPANXA1Q9NS26 97 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 SELENOKQ9Y6D0 94 aa9.54□□□□□ -0.88
DDX39A-202ENST00000324340 IGKV3-7A0A075B6H7 116 aa9.53□□□□□ -0.88
DDX39A-202ENST00000324340 PF4P02776 101 aa9.53□□□□□ -0.88
DDX39A-202ENST00000324340 CFAP161Q6P656 301 aa9.53□□□□□ -0.88
DDX39A-202ENST00000324340 Q86TA4 180 aa9.53□□□□□ -0.88
DDX39A-202ENST00000324340 PRSS3P2Q8NHM4 247 aa9.53□□□□□ -0.88
DDX39A-202ENST00000324340 PGLYRP4Q96LB8 373 aa9.53□□□□□ -0.88
DDX39A-202ENST00000324340 TP73-AS1Q9UF72 201 aa9.53□□□□□ -0.88
DDX39A-202ENST00000324340 IGKV2-40A0A087WW87 121 aaPredicted RBP9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms