RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PYY3Q5JQD4 70 aa11.57□□□□□ -0.56
HERPUD1-201ENST00000300302 C9orf66Q5T8R8 295 aa11.57□□□□□ -0.56
HERPUD1-201ENST00000300302 TEP1Q99973 2627 aaKnown RBP11.57□□□□□ -0.56
HERPUD1-201ENST00000300302 NUPR1O60356 82 aa11.57□□□□□ -0.56
HERPUD1-201ENST00000300302 NUTF2P61970 127 aaKnown RBP11.57□□□□□ -0.56
HERPUD1-201ENST00000300302 ORMDL3Q8N138 153 aa11.57□□□□□ -0.56
HERPUD1-201ENST00000300302 C20orf144Q9BQM9 153 aa11.57□□□□□ -0.56
HERPUD1-201ENST00000300302 TRGV11A0A075B6L2 103 aa11.56□□□□□ -0.56
HERPUD1-201ENST00000300302 M0R381 172 aa11.56□□□□□ -0.56
HERPUD1-201ENST00000300302 IQCJQ1A5X6 159 aa11.56□□□□□ -0.56
HERPUD1-201ENST00000300302 MRPL51Q4U2R6 128 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-201ENST00000300302 TRPT1Q86TN4 253 aaKnown RBP11.56□□□□□ -0.56
HERPUD1-201ENST00000300302 Q8N1Y9 231 aa11.56□□□□□ -0.56
HERPUD1-201ENST00000300302 D6R8Y8 96 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 INSP01308 110 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 PPBPP02775 128 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 RAB4AP20338 218 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 RCHY1Q96PM5 261 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 U3KQK5 164 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 MAST4O15021 2626 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 IGHV3-16A0A0C4DH30 117 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 CBY3A6NI87 242 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 EVI2AP22794 236 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 CKS2P33552 79 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 MCRIP2Q9BUT9 160 aaKnown RBP11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 SAMD10Q9BYL1 202 aa11.55□□□□□ -0.56
HERPUD1-201ENST00000300302 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
HERPUD1-201ENST00000300302 PRELID3AQ96N28 172 aa11.54□□□□□ -0.56
HERPUD1-201ENST00000300302 NXPH4O95158 308 aa11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 C9orf85Q96MD7 179 aa11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 NIT2Q9NQR4 276 aa11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 RNASEKQ6P5S7 137 aaKnown RBP11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 AP1S3Q96PC3 154 aa11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 C19orf73Q9NVV2 129 aa11.53□□□□□ -0.56
HERPUD1-201ENST00000300302 HSBP1O75506 76 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 CDPF1Q6NVV7 123 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 GTSCR1Q86UQ5 136 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 NIT1Q86X76 327 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 SYT8Q8NBV8 401 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 CHCHD1Q96BP2 118 aaKnown RBP11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 LINC01587Q99440 93 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 LINC00467Q9BRT7 94 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 MDFICQ9P1T7 246 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 LAMTOR2Q9Y2Q5 125 aa11.52□□□□□ -0.57
HERPUD1-201ENST00000300302 SPRY2O43597 315 aa11.51□□□□□ -0.57
HERPUD1-201ENST00000300302 HTN1P15515 57 aa11.51□□□□□ -0.57
HERPUD1-201ENST00000300302 ZNF747Q9BV97 191 aa11.51□□□□□ -0.57
HERPUD1-201ENST00000300302 DPH3P1Q9H4G8 78 aa11.51□□□□□ -0.57
HERPUD1-201ENST00000300302 XCL2Q9UBD3 114 aa11.51□□□□□ -0.57
HERPUD1-201ENST00000300302 LINC00614P0C842 121 aa11.51□□□□□ -0.57
HERPUD1-201ENST00000300302 AMTP48728 403 aa11.51□□□□□ -0.57
HERPUD1-201ENST00000300302 FBN1P35555 2871 aaKnown RBP11.5□□□□□ -0.57
HERPUD1-201ENST00000300302 SMIM17P0DL12 118 aa11.5□□□□□ -0.57
HERPUD1-201ENST00000300302 C3orf56Q8N813 242 aa11.5□□□□□ -0.57
HERPUD1-201ENST00000300302 WFDC9Q8NEX5 89 aa11.5□□□□□ -0.57
HERPUD1-201ENST00000300302 PRSS3P2Q8NHM4 247 aa11.5□□□□□ -0.57
HERPUD1-201ENST00000300302 MRAP2Q96G30 205 aa11.5□□□□□ -0.57
HERPUD1-201ENST00000300302 TMEM208Q9BTX3 173 aa11.5□□□□□ -0.57
HERPUD1-201ENST00000300302 PCP4L1A6NKN8 68 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 NCR2O95944 276 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 PMCHP20382 165 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 JOSD1Q15040 202 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 MORN3Q6PF18 240 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 C14orf178Q8N769 122 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 TENM1Q9UKZ4 2725 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 ZNF415Q09FC8 603 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 SPATA3Q8NHX4 192 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
HERPUD1-201ENST00000300302 ATRQ13535 2644 aa11.48□□□□□ -0.57
HERPUD1-201ENST00000300302 NPYP01303 97 aa11.48□□□□□ -0.57
HERPUD1-201ENST00000300302 FA2HQ7L5A8 372 aa11.48□□□□□ -0.57
HERPUD1-201ENST00000300302 URB1-AS1Q96HZ7 61 aa11.48□□□□□ -0.57
HERPUD1-201ENST00000300302 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
HERPUD1-201ENST00000300302 TNFRSF6BO95407 300 aa11.47□□□□□ -0.57
HERPUD1-201ENST00000300302 SHISA2Q6UWI4 295 aa11.47□□□□□ -0.57
HERPUD1-201ENST00000300302 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
HERPUD1-201ENST00000300302 LOC389332A0A1B0GUA5 103 aa11.46□□□□□ -0.57
HERPUD1-201ENST00000300302 MGPP08493 103 aa11.46□□□□□ -0.57
HERPUD1-201ENST00000300302 RPL35AP18077 110 aaKnown RBP11.46□□□□□ -0.57
HERPUD1-201ENST00000300302 ZNF876PQ49A33 203 aa11.46□□□□□ -0.57
HERPUD1-201ENST00000300302 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.57
HERPUD1-201ENST00000300302 FAM19A2Q8N3H0 131 aa11.46□□□□□ -0.57
HERPUD1-201ENST00000300302 AP5S1Q9NUS5 200 aa11.46□□□□□ -0.57
HERPUD1-201ENST00000300302 MUC4Q99102 2169 aa11.46□□□□□ -0.57
HERPUD1-201ENST00000300302 IFI27P40305 119 aaPredicted RBP11.46□□□□□ -0.58
HERPUD1-201ENST00000300302 C1orf158Q8N1D5 194 aa11.46□□□□□ -0.58
HERPUD1-201ENST00000300302 DEFB125Q8N687 156 aa11.46□□□□□ -0.58
HERPUD1-201ENST00000300302 GSN-AS1Q9NRJ2 163 aa11.46□□□□□ -0.58
HERPUD1-201ENST00000300302 GOLT1BQ9Y3E0 138 aa11.46□□□□□ -0.58
HERPUD1-201ENST00000300302 S100A12P80511 92 aa11.45□□□□□ -0.58
HERPUD1-201ENST00000300302 Q6ZWC4 215 aa11.45□□□□□ -0.58
HERPUD1-201ENST00000300302 IGHV3OR16-12A0A075B7B8 117 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
HERPUD1-201ENST00000300302 IGLL1P15814 213 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 192.6 ms