RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 WI2-2373I1.2A0A1W2PRP0 233 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 SDHAF1A6NFY7 115 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 IGHV3-23P01764 117 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 TMEM14CQ9P0S9 112 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 CCL17Q92583 94 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 Q6ZS52 159 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 TMEM61Q8N0U2 210 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 TRGV5A0A0B4J1U4 118 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 UBE2BP63146 152 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 SPRNQ5BIV9 151 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 C5orf38Q86SI9 138 aa9.11□□□□□ -0.95
SNIP1-201ENST00000296215 POLEQ07864 2286 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 SPTY2D1-AS1A0A0U1RR47 76 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 LINC01548A6NM66 108 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 EFNA2O43921 213 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 IGLV3-1P01715 115 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 USF3Q68DE3 2245 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 H0YGX0 51 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 MRPS21P82921 87 aaKnown RBP9.1□□□□□ -0.95
SNIP1-201ENST00000296215 ARTNQ5T4W7 220 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 LINC01561Q8N1V8 128 aa9.1□□□□□ -0.95
SNIP1-201ENST00000296215 RIF1Q5UIP0 2472 aaKnown RBP9.1□□□□□ -0.95
SNIP1-201ENST00000296215 FOXL2NBQ6ZUU3 175 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 C2orf48Q96LS8 159 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 JMJD7-PLA2G4BH0Y9G9 81 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 TMEM167AQ8TBQ9 72 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 PATE2Q6UY27 113 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 FREM1Q5H8C1 2179 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 A0A087WWL8 130 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 IGKV1-16P04430 117 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 AGRNO00468 2067 aa9.09□□□□□ -0.95
SNIP1-201ENST00000296215 ZNF561-AS1K7EIQ3 104 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 NACAE9PAV3 2078 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 CACNA1BQ00975 2339 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 A0A0G2JNJ9 132 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 TMEM223A0PJW6 202 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 Q9UFV3 132 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 AKAP6Q13023 2319 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 TMEM263Q8WUH6 116 aaKnown RBP9.08□□□□□ -0.96
SNIP1-201ENST00000296215 ZNF524Q96C55 264 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 A0A0J9YXV3 536 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 TPSG1Q9NRR2 321 aa9.08□□□□□ -0.96
SNIP1-201ENST00000296215 TRAV7A0A075B6U4 112 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 PIP4P1Q86T03 277 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 IGKV1OR2-108A0A075B7D4 117 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 NEXN-AS1Q8NBZ9 246 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 SDK2Q58EX2 2172 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 DENND4CQ5VZ89 1909 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 IGHV5-10-1A0A0J9YXX1 117 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 PF4P02776 101 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 U3KQK5 164 aa9.07□□□□□ -0.96
SNIP1-201ENST00000296215 C17orf100A8MU93 164 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 FAM27E3Q08E93 113 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 Q6ZS46 218 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 C17orf77Q96MU5 243 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 NDUFA4L2Q9NRX3 87 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 LECT2O14960 151 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 SBSPONQ8IVN8 264 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 THAP8Q8NA92 274 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 DEFB124Q8NES8 71 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 C16orf97H3BN30 126 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 ZNF407Q9C0G0 2248 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 A0A0J9YXY3 114 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 TNFRSF13BO14836 293 aaPredicted RBP9.06□□□□□ -0.96
SNIP1-201ENST00000296215 MIFP14174 115 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 GP9P14770 177 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 RPL39LQ96EH5 51 aaKnown RBP9.06□□□□□ -0.96
SNIP1-201ENST00000296215 SPTBN2O15020 2390 aa9.06□□□□□ -0.96
SNIP1-201ENST00000296215 SAA4P35542 130 aa9.05□□□□□ -0.96
SNIP1-201ENST00000296215 A6NED7 52 aa9.05□□□□□ -0.96
SNIP1-201ENST00000296215 MYO16Q9Y6X6 1858 aa9.05□□□□□ -0.96
SNIP1-201ENST00000296215 LRCOL1A6NCL2 159 aa9.05□□□□□ -0.96
SNIP1-201ENST00000296215 A8MZ25 164 aa9.05□□□□□ -0.96
SNIP1-201ENST00000296215 PSPHP1O15172 72 aa9.05□□□□□ -0.96
SNIP1-201ENST00000296215 MIAQ16674 131 aa9.05□□□□□ -0.96
SNIP1-201ENST00000296215 FAM110DQ8TAY7 271 aaPredicted RBP9.05□□□□□ -0.96
SNIP1-201ENST00000296215 A0A096LNJ9 63 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 TRGV3P03979 118 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 RNASE13Q5GAN3 156 aaKnown RBP9.04□□□□□ -0.96
SNIP1-201ENST00000296215 HIST2H2BCQ6DN03 193 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 HIST2H2BDQ6DRA6 164 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 Q9H8V8 135 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 IGKV3-20P01619 116 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 IGLV2-14P01704 120 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 PLXNA3P51805 1871 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 FAM223BA6NKX1 122 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 CXCL10P02778 98 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 SS18Q15532 418 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 PIK3CD-AS1Q5SR53 167 aa9.04□□□□□ -0.96
SNIP1-201ENST00000296215 PLAC8L1A1L4L8 177 aa9.03□□□□□ -0.96
SNIP1-201ENST00000296215 ZNF883P0CG24 379 aa9.03□□□□□ -0.96
SNIP1-201ENST00000296215 DKK4Q9UBT3 224 aa9.03□□□□□ -0.96
SNIP1-201ENST00000296215 LCTP09848 1927 aa9.03□□□□□ -0.96
SNIP1-201ENST00000296215 WT1-ASQ06250 92 aa9.03□□□□□ -0.96
SNIP1-201ENST00000296215 NDUFS5O43920 106 aa9.03□□□□□ -0.96
SNIP1-201ENST00000296215 RPL39P62891 51 aaKnown RBP9.03□□□□□ -0.96
SNIP1-201ENST00000296215 UBE2AP49459 152 aa9.02□□□□□ -0.97
SNIP1-201ENST00000296215 EBI3Q14213 229 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms