RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 RPH3ALQ9UNE2 315 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 ZFP30Q9Y2G7 519 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 LRP1BQ9NZR2 4599 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 F5H768 121 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 GCGP01275 180 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 P0DMU3 169 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 FAM231AP0DMU4 169 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 FAM231CP0DMU5 169 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 HTN3P15516 51 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 ZNF674Q2M3X9 581 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 SMUG1Q53HV7 270 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 FAM159AQ6UWV7 190 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 Q86TA4 180 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 TMEM183AQ8IXX5 376 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 C11orf52Q96A22 123 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 ZC2HC1AQ96GY0 325 aa6.34□□□□□ -1.39
HMGN1-201ENST00000288344 TRAV26-1A0A087WT03 109 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 A0A096LPF7 62 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 TRGV1A0A0A0MS02 117 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 FABP5P3A8MUU1 101 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 K7EQM0 130 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 PFDN1O60925 122 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 IGLV2-8P01709 118 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 ZNRF2Q8NHG8 242 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 KCNS1Q96KK3 526 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 SCRT2Q9NQ03 307 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 MRPL16Q9NX20 251 aaKnown RBP6.33□□□□□ -1.4
HMGN1-201ENST00000288344 LINC00588Q9Y4M8 146 aa6.33□□□□□ -1.4
HMGN1-201ENST00000288344 TRGV11A0A075B6L2 103 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 KRBOX1C9JBD0 128 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 M0R2P5 195 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 IFNA7P01567 189 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 CRYBA4P53673 196 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 ZNF415Q09FC8 603 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 ESRGQ1W209 222 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 PIK3CD-AS1Q5SR53 167 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 EIF5AL1Q6IS14 154 aaKnown RBP6.32□□□□□ -1.4
HMGN1-201ENST00000288344 FMC1Q96HJ9 113 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 ZNF479Q96JC4 524 aa6.32□□□□□ -1.4
HMGN1-201ENST00000288344 PGPEP1LA6NFU8 196 aa6.31□□□□□ -1.4
HMGN1-201ENST00000288344 FAM3BP58499 235 aaPredicted RBP6.31□□□□□ -1.4
HMGN1-201ENST00000288344 OR5I1Q13606 314 aa6.31□□□□□ -1.4
HMGN1-201ENST00000288344 CST9LP1Q5W188 147 aa6.31□□□□□ -1.4
HMGN1-201ENST00000288344 UFSP1Q6NVU6 142 aa6.31□□□□□ -1.4
HMGN1-201ENST00000288344 NDFIP1Q9BT67 221 aa6.31□□□□□ -1.4
HMGN1-201ENST00000288344 KIAA1109Q2LD37 5005 aa6.31□□□□□ -1.4
HMGN1-201ENST00000288344 TRBV20OR9-2A0A075B6H5 130 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 TRGV2A0A075B6R0 118 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 TRAV4A0A0B4J268 109 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 A0A0J9YY99 117 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 A0A1B0GV50 99 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 RTL8CO15255 209 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 RS1O15537 224 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 SH2D1AO60880 128 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 S100A9P06702 114 aaKnown RBP6.3□□□□□ -1.4
HMGN1-201ENST00000288344 PPT1P50897 306 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 NKX2-5P52952 324 aaPredicted RBP6.3□□□□□ -1.4
HMGN1-201ENST00000288344 ZFP69Q49AA0 526 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 TXNDC17Q9BRA2 123 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 UPK3BQ9BT76 320 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 DERL1Q9BUN8 251 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 SDF2L1Q9HCN8 221 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 IL36BQ9NZH7 164 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 PRO0255Q9UI72 69 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 HHLA3Q9XRX5 114 aa6.3□□□□□ -1.4
HMGN1-201ENST00000288344 A0A1B0GVY2 172 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 SFTA3P0C7M3 94 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 GATA1P15976 413 aaPredicted RBP6.29□□□□□ -1.4
HMGN1-201ENST00000288344 SLAQ13239 276 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 CFAP126Q5VTH2 177 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 Q6ZSN1 163 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 MANBALQ9NQG1 85 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 FAM30AQ9NZY2 134 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 GNG13Q9P2W3 67 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 NAGKQ9UJ70 344 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 APOBP04114 4563 aaKnown RBP6.29□□□□□ -1.4
HMGN1-201ENST00000288344 HERC2O95714 4834 aa6.29□□□□□ -1.4
HMGN1-201ENST00000288344 C19orf71A6NCJ1 209 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 NUDT3O95989 172 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 IGHV3-53P01767 116 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 RPL35P42766 123 aaKnown RBP6.28□□□□□ -1.4
HMGN1-201ENST00000288344 ZNF876PQ49A33 203 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 ZNF506Q5JVG8 444 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 FAM162BQ5T6X4 162 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 ALKAL2Q6UX46 152 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 BAGE2Q86Y30 109 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 Q9UF83 564 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 HSPG2P98160 4391 aa6.28□□□□□ -1.4
HMGN1-201ENST00000288344 K7EQD1 137 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 CIDEAO60543 219 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 NDUFS6O75380 124 aaKnown RBP6.27□□□□□ -1.41
HMGN1-201ENST00000288344 NXPH4O95158 308 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 CXCL1P09341 107 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 BCL2P10415 239 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 AKR1C3P42330 323 aa6.27□□□□□ -1.41
HMGN1-201ENST00000288344 MEF2BQ02080 365 aaPredicted RBP6.27□□□□□ -1.41
HMGN1-201ENST00000288344 LYPD5Q6UWN5 251 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms