RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 EVI2AP22794 236 aa16.27■□□□□ 0.19
CCDC7-201ENST00000277657 PHLDA3Q9Y5J5 127 aa16.27■□□□□ 0.19
CCDC7-201ENST00000277657 PF4P02776 101 aa16.26■□□□□ 0.19
CCDC7-201ENST00000277657 IGHV1OR15-1A0A075B7D0 117 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 NXPH4O95158 308 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 CD7P09564 240 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 AMTP48728 403 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 JOSD1Q15040 202 aaPredicted RBP16.25■□□□□ 0.19
CCDC7-201ENST00000277657 SMIM15Q7Z3B0 74 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 CHCHD1Q96BP2 118 aaKnown RBP16.25■□□□□ 0.19
CCDC7-201ENST00000277657 PRELID3AQ96N28 172 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 OR11H12B2RN74 326 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 PPBPP02775 128 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 CKS2P33552 79 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 FXYD7P58549 80 aa16.25■□□□□ 0.19
CCDC7-201ENST00000277657 RNASEKQ6P5S7 137 aaKnown RBP16.25■□□□□ 0.19
CCDC7-201ENST00000277657 HSBP1O75506 76 aa16.24■□□□□ 0.19
CCDC7-201ENST00000277657 RBMY1A1P0DJD3 496 aaKnown RBP16.24■□□□□ 0.19
CCDC7-201ENST00000277657 RBMY1CP0DJD4 496 aa16.24■□□□□ 0.19
CCDC7-201ENST00000277657 PMCHP20382 165 aa16.24■□□□□ 0.19
CCDC7-201ENST00000277657 CMC4P56277 68 aaPredicted RBP16.24■□□□□ 0.19
CCDC7-201ENST00000277657 RBMY1FQ15415 496 aaKnown RBP16.24■□□□□ 0.19
CCDC7-201ENST00000277657 CITED1Q99966 193 aa16.24■□□□□ 0.19
CCDC7-201ENST00000277657 TENM1Q9UKZ4 2725 aa16.23■□□□□ 0.19
CCDC7-201ENST00000277657 IGHV3-16A0A0C4DH30 117 aa16.23■□□□□ 0.19
CCDC7-201ENST00000277657 M0R381 172 aa16.23■□□□□ 0.19
CCDC7-201ENST00000277657 SPRY2O43597 315 aa16.23■□□□□ 0.19
CCDC7-201ENST00000277657 LINC00614P0C842 121 aa16.23■□□□□ 0.19
CCDC7-201ENST00000277657 BEAN1Q3B7T3 259 aa16.23■□□□□ 0.19
CCDC7-201ENST00000277657 Q6ZWC4 215 aa16.23■□□□□ 0.19
CCDC7-201ENST00000277657 FAM110AQ9BQ89 295 aa16.23■□□□□ 0.19
CCDC7-201ENST00000277657 Q8N1Y9 231 aa16.22■□□□□ 0.19
CCDC7-201ENST00000277657 FAM19A2Q8N3H0 131 aa16.22■□□□□ 0.19
CCDC7-201ENST00000277657 C9orf85Q96MD7 179 aa16.22■□□□□ 0.19
CCDC7-201ENST00000277657 MUC4Q99102 2169 aa16.22■□□□□ 0.19
CCDC7-201ENST00000277657 SMKR1H3BMG3 65 aa16.22■□□□□ 0.19
CCDC7-201ENST00000277657 NIT2Q9NQR4 276 aa16.22■□□□□ 0.19
CCDC7-201ENST00000277657 LAMTOR2Q9Y2Q5 125 aa16.21■□□□□ 0.19
CCDC7-201ENST00000277657 JMJD1CQ15652 2540 aa16.21■□□□□ 0.19
CCDC7-201ENST00000277657 NCR2O95944 276 aa16.2■□□□□ 0.18
CCDC7-201ENST00000277657 TRPT1Q86TN4 253 aaKnown RBP16.2■□□□□ 0.18
CCDC7-201ENST00000277657 NPYP01303 97 aa16.2■□□□□ 0.18
CCDC7-201ENST00000277657 CDPF1Q6NVV7 123 aa16.2■□□□□ 0.18
CCDC7-201ENST00000277657 STHQ8IWL8 128 aa16.2■□□□□ 0.18
CCDC7-201ENST00000277657 MDFICQ9P1T7 246 aa16.2■□□□□ 0.18
CCDC7-201ENST00000277657 GAS8-AS1O95177 125 aa16.18■□□□□ 0.18
CCDC7-201ENST00000277657 C19orf73Q9NVV2 129 aa16.18■□□□□ 0.18
CCDC7-201ENST00000277657 TRGV11A0A075B6L2 103 aa16.18■□□□□ 0.18
CCDC7-201ENST00000277657 AP1S3Q96PC3 154 aa16.18■□□□□ 0.18
CCDC7-201ENST00000277657 C20orf144Q9BQM9 153 aa16.18■□□□□ 0.18
CCDC7-201ENST00000277657 DPH3P1Q9H4G8 78 aa16.18■□□□□ 0.18
CCDC7-201ENST00000277657 TEP1Q99973 2627 aaKnown RBP16.17■□□□□ 0.18
CCDC7-201ENST00000277657 PRSS3P2Q8NHM4 247 aa16.17■□□□□ 0.18
CCDC7-201ENST00000277657 ATRQ13535 2644 aa16.16■□□□□ 0.18
CCDC7-201ENST00000277657 IGHV1-24A0A0C4DH33 117 aa16.16■□□□□ 0.18
CCDC7-201ENST00000277657 IFI27P40305 119 aaPredicted RBP16.16■□□□□ 0.18
CCDC7-201ENST00000277657 LINC00467Q9BRT7 94 aa16.16■□□□□ 0.18
CCDC7-201ENST00000277657 AP5S1Q9NUS5 200 aa16.16■□□□□ 0.18
CCDC7-201ENST00000277657 VWFP04275 2813 aa16.16■□□□□ 0.18
CCDC7-201ENST00000277657 TNFRSF6BO95407 300 aa16.16■□□□□ 0.18
CCDC7-201ENST00000277657 INSP01308 110 aa16.16■□□□□ 0.18
CCDC7-201ENST00000277657 C14orf178Q8N769 122 aaPredicted RBP16.16■□□□□ 0.18
CCDC7-201ENST00000277657 MRAP2Q96G30 205 aa16.16■□□□□ 0.18
CCDC7-201ENST00000277657 CBY3A6NI87 242 aa16.15■□□□□ 0.18
CCDC7-201ENST00000277657 FA2HQ7L5A8 372 aa16.15■□□□□ 0.18
CCDC7-201ENST00000277657 KIF25-AS1Q9Y6Z4 181 aa16.15■□□□□ 0.18
CCDC7-201ENST00000277657 LOC389332A0A1B0GUA5 103 aa16.14■□□□□ 0.17
CCDC7-201ENST00000277657 GATA1P15976 413 aaPredicted RBP16.14■□□□□ 0.17
CCDC7-201ENST00000277657 INSL3P51460 131 aa16.14■□□□□ 0.17
CCDC7-201ENST00000277657 POM121L12Q8N7R1 296 aa16.14■□□□□ 0.17
CCDC7-201ENST00000277657 NRACQ8N912 160 aa16.14■□□□□ 0.17
CCDC7-201ENST00000277657 PMCHL1Q16048 86 aa16.14■□□□□ 0.17
CCDC7-201ENST00000277657 MAP1LC3AQ9H492 121 aa16.14■□□□□ 0.17
CCDC7-201ENST00000277657 TRAV26-2A0A0B4J265 109 aa16.13■□□□□ 0.17
CCDC7-201ENST00000277657 DEFB125Q8N687 156 aa16.13■□□□□ 0.17
CCDC7-201ENST00000277657 PRSS47A8MTI9 375 aa16.12■□□□□ 0.17
CCDC7-201ENST00000277657 LINC00315P59091 139 aa16.12■□□□□ 0.17
CCDC7-201ENST00000277657 SYT8Q8NBV8 401 aa16.12■□□□□ 0.17
CCDC7-201ENST00000277657 SPATA3Q8NHX4 192 aa16.12■□□□□ 0.17
CCDC7-201ENST00000277657 GSN-AS1Q9NRJ2 163 aa16.12■□□□□ 0.17
CCDC7-201ENST00000277657 NUTF2P61970 127 aaKnown RBP16.12■□□□□ 0.17
CCDC7-201ENST00000277657 XCL2Q9UBD3 114 aa16.12■□□□□ 0.17
CCDC7-201ENST00000277657 LINC01546A6NGU7 62 aa16.11■□□□□ 0.17
CCDC7-201ENST00000277657 SCGB1D1O95968 90 aa16.11■□□□□ 0.17
CCDC7-201ENST00000277657 WFDC10AQ9H1F0 79 aa16.11■□□□□ 0.17
CCDC7-201ENST00000277657 C3orf79P0CE67 100 aa16.1■□□□□ 0.17
CCDC7-201ENST00000277657 KRTDAPP60985 99 aa16.1■□□□□ 0.17
CCDC7-201ENST00000277657 C9orf66Q5T8R8 295 aa16.1■□□□□ 0.17
CCDC7-201ENST00000277657 LINC01587Q99440 93 aa16.1■□□□□ 0.17
CCDC7-201ENST00000277657 JPT2Q9H910 190 aa16.1■□□□□ 0.17
CCDC7-201ENST00000277657 HTN1P15515 57 aa16.1■□□□□ 0.17
CCDC7-201ENST00000277657 NXT2Q9NPJ8 142 aaKnown RBP16.1■□□□□ 0.17
CCDC7-201ENST00000277657 SMIM17P0DL12 118 aa16.08■□□□□ 0.17
CCDC7-201ENST00000277657 C1orf158Q8N1D5 194 aa16.08■□□□□ 0.17
CCDC7-201ENST00000277657 Q8N976 141 aa16.08■□□□□ 0.17
CCDC7-201ENST00000277657 IGLV2-18A0A075B6J9 118 aa16.08■□□□□ 0.16
CCDC7-201ENST00000277657 LEPROTL1O95214 131 aa16.08■□□□□ 0.16
CCDC7-201ENST00000277657 PRM2P04554 102 aa16.08■□□□□ 0.16
CCDC7-201ENST00000277657 MGPP08493 103 aa16.08■□□□□ 0.16
CCDC7-201ENST00000277657 RASL10AQ92737 203 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms