RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 BAALCQ8WXS3 180 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 TOMM6Q96B49 74 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 TSSC4Q9Y5U2 329 aaPredicted RBP12.78□□□□□ -0.36
RTN1-201ENST00000267484 HLA-DRB4X5D2U9 266 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 INSL3P51460 131 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 PLEKHB2Q96CS7 222 aa12.78□□□□□ -0.36
RTN1-201ENST00000267484 SPANXB1Q9NS25 103 aaPredicted RBP12.78□□□□□ -0.36
RTN1-201ENST00000267484 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.36
RTN1-201ENST00000267484 LGALS1P09382 135 aaKnown RBP12.77□□□□□ -0.36
RTN1-201ENST00000267484 ASIPP42127 132 aa12.77□□□□□ -0.36
RTN1-201ENST00000267484 C9orf139Q6ZV77 190 aa12.77□□□□□ -0.36
RTN1-201ENST00000267484 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.36
RTN1-201ENST00000267484 SORL1Q92673 2214 aa12.77□□□□□ -0.37
RTN1-201ENST00000267484 SMAGPQ0VAQ4 97 aa12.77□□□□□ -0.37
RTN1-201ENST00000267484 DPH3P1Q9H4G8 78 aa12.77□□□□□ -0.37
RTN1-201ENST00000267484 CSPG4Q6UVK1 2322 aa12.77□□□□□ -0.37
RTN1-201ENST00000267484 SCGB2A2Q13296 93 aa12.76□□□□□ -0.37
RTN1-201ENST00000267484 ORMDL2Q53FV1 153 aa12.76□□□□□ -0.37
RTN1-201ENST00000267484 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
RTN1-201ENST00000267484 DUSP14O95147 198 aaKnown RBP12.76□□□□□ -0.37
RTN1-201ENST00000267484 CD300EQ496F6 205 aaPredicted RBP12.76□□□□□ -0.37
RTN1-201ENST00000267484 CELSR2Q9HCU4 2923 aa12.76□□□□□ -0.37
RTN1-201ENST00000267484 RRN3P1Q2M238 152 aa12.76□□□□□ -0.37
RTN1-201ENST00000267484 KLK9Q2XQG4 91 aa12.76□□□□□ -0.37
RTN1-201ENST00000267484 KLK9Q9UKQ9 250 aa12.76□□□□□ -0.37
RTN1-201ENST00000267484 TRAV12-1A0A0B4J245 112 aa12.75□□□□□ -0.37
RTN1-201ENST00000267484 AZU1P20160 251 aa12.75□□□□□ -0.37
RTN1-201ENST00000267484 KLRB1Q12918 225 aa12.75□□□□□ -0.37
RTN1-201ENST00000267484 RNASE3P12724 160 aaKnown RBP12.75□□□□□ -0.37
RTN1-201ENST00000267484 SLC25A16P16260 332 aa12.75□□□□□ -0.37
RTN1-201ENST00000267484 Q6ZS46 218 aa12.75□□□□□ -0.37
RTN1-201ENST00000267484 ZNF815PA8K554 130 aa12.75□□□□□ -0.37
RTN1-201ENST00000267484 SCGB1D4Q6XE38 83 aa12.74□□□□□ -0.37
RTN1-201ENST00000267484 LINC00477Q96M19 166 aa12.74□□□□□ -0.37
RTN1-201ENST00000267484 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
RTN1-201ENST00000267484 SOCS3O14543 225 aa12.74□□□□□ -0.37
RTN1-201ENST00000267484 TAL2Q16559 108 aa12.74□□□□□ -0.37
RTN1-201ENST00000267484 SAMD13Q5VXD3 122 aa12.74□□□□□ -0.37
RTN1-201ENST00000267484 MORN3Q6PF18 240 aaPredicted RBP12.74□□□□□ -0.37
RTN1-201ENST00000267484 PGPEP1Q9NXJ5 209 aa12.74□□□□□ -0.37
RTN1-201ENST00000267484 MOB4Q9Y3A3 225 aa12.74□□□□□ -0.37
RTN1-201ENST00000267484 A0A087WWL8 130 aa12.73□□□□□ -0.37
RTN1-201ENST00000267484 RPL39P62891 51 aaKnown RBP12.73□□□□□ -0.37
RTN1-201ENST00000267484 F8W1H4 67 aa12.73□□□□□ -0.37
RTN1-201ENST00000267484 GAGE13Q4V321 117 aa12.73□□□□□ -0.37
RTN1-201ENST00000267484 DOPEY2Q9Y3R5 2298 aa12.73□□□□□ -0.37
RTN1-201ENST00000267484 PF4V1P10720 104 aa12.72□□□□□ -0.37
RTN1-201ENST00000267484 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
RTN1-201ENST00000267484 HOXA3O43365 443 aaPredicted RBP12.72□□□□□ -0.37
RTN1-201ENST00000267484 CRYGDP07320 174 aa12.72□□□□□ -0.37
RTN1-201ENST00000267484 BLCAPP62952 87 aa12.72□□□□□ -0.37
RTN1-201ENST00000267484 SRSF9Q13242 221 aaKnown RBP eCLIP12.71□□□□□ -0.37
RTN1-201ENST00000267484 C19orf54Q5BKX5 351 aa12.71□□□□□ -0.37
RTN1-201ENST00000267484 MRPL16Q9NX20 251 aaKnown RBP12.71□□□□□ -0.37
RTN1-201ENST00000267484 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
RTN1-201ENST00000267484 LINC01549A6NIU2 74 aa12.71□□□□□ -0.37
RTN1-201ENST00000267484 FAM223BA6NKX1 122 aa12.71□□□□□ -0.37
RTN1-201ENST00000267484 TSHBP01222 138 aa12.71□□□□□ -0.37
RTN1-201ENST00000267484 FAM223AQ8IWN6 122 aa12.71□□□□□ -0.37
RTN1-201ENST00000267484 TP53TG1Q9Y2A0 90 aa12.71□□□□□ -0.37
RTN1-201ENST00000267484 C11orf86A6NJI1 115 aa12.71□□□□□ -0.38
RTN1-201ENST00000267484 C19orf84I3L1E1 186 aa12.71□□□□□ -0.38
RTN1-201ENST00000267484 OVOL1O14753 267 aa12.71□□□□□ -0.38
RTN1-201ENST00000267484 APOMO95445 188 aa12.71□□□□□ -0.38
RTN1-201ENST00000267484 RHPN1-AS1Q9BWJ2 59 aa12.71□□□□□ -0.38
RTN1-201ENST00000267484 PRO0461Q9UI25 63 aa12.71□□□□□ -0.38
RTN1-201ENST00000267484 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
RTN1-201ENST00000267484 LY6DQ14210 128 aa12.7□□□□□ -0.38
RTN1-201ENST00000267484 LENEPQ9Y5L5 61 aa12.7□□□□□ -0.38
RTN1-201ENST00000267484 A0A1B0GWB2 263 aa12.7□□□□□ -0.38
RTN1-201ENST00000267484 F5H697 171 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 IGKV3-20P01619 116 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 CSMD2Q7Z408 3487 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 LOC107984156A0A0G2JMH3 177 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 ZFP2Q6ZN57 461 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 ARL17AQ8IVW1 177 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 SIGMAR1Q99720 223 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 NDUFA4O00483 81 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 FAM74A4Q5TZK3 123 aa12.69□□□□□ -0.38
RTN1-201ENST00000267484 TGFAP01135 160 aa12.68□□□□□ -0.38
RTN1-201ENST00000267484 LINC00315P59091 139 aa12.68□□□□□ -0.38
RTN1-201ENST00000267484 TRAV12-3A0A0B4J271 114 aa12.68□□□□□ -0.38
RTN1-201ENST00000267484 IGLV4-69A0A075B6H9 119 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 IGHV1-69DA0A0B4J2H0 117 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 H3BUX3 64 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 IGHV1-69P01742 117 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 IGHV4-39P01824 125 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 COX6B1P14854 86 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 TMEM95Q3KNT9 176 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 SUMO4Q6EEV6 95 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 FAM19A4Q96LR4 140 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
RTN1-201ENST00000267484 PSMB2P49721 201 aa12.66□□□□□ -0.38
RTN1-201ENST00000267484 TSPEAR-AS2P59090 65 aa12.66□□□□□ -0.38
RTN1-201ENST00000267484 PTH2Q96A98 100 aa12.66□□□□□ -0.38
RTN1-201ENST00000267484 OPRPNQ99935 248 aaPredicted RBP12.66□□□□□ -0.38
RTN1-201ENST00000267484 CD7P09564 240 aa12.66□□□□□ -0.38
RTN1-201ENST00000267484 ZNF418Q8TF45 676 aaPredicted RBP12.66□□□□□ -0.38
RTN1-201ENST00000267484 KIF25-AS1Q9Y6Z4 181 aa12.66□□□□□ -0.38
RTN1-201ENST00000267484 IGHV4-61A0A0C4DH41 118 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms