RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 IGHV3-11P01762 117 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 SLC25A16P16260 332 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 SRD5A1P18405 259 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 C1orf122Q6ZSJ8 110 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 MRAP2Q96G30 205 aa13.63□□□□□ -0.23
TRAF4-201ENST00000262395 TAL2Q16559 108 aa13.62□□□□□ -0.23
TRAF4-201ENST00000262395 MORN3Q6PF18 240 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-201ENST00000262395 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
TRAF4-201ENST00000262395 MRPL16Q9NX20 251 aaKnown RBP13.62□□□□□ -0.23
TRAF4-201ENST00000262395 HOXA3O43365 443 aaPredicted RBP13.62□□□□□ -0.23
TRAF4-201ENST00000262395 ZFAND2AQ8N6M9 145 aa13.62□□□□□ -0.23
TRAF4-201ENST00000262395 IGHV4-4A0A075B6R2 117 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 LOC107984156A0A0G2JMH3 177 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 K7ENP7 123 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 SRSF9Q13242 221 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■■□□ 16.3
TRAF4-201ENST00000262395 ORMDL2Q53FV1 153 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 ARL17AQ8IVW1 177 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 CENPVL3A0A0U1RRI6 287 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 LINC01549A6NIU2 74 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 DUSP14O95147 198 aaKnown RBP13.61□□□□□ -0.23
TRAF4-201ENST00000262395 UBE2E1P51965 193 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 JPT2Q9H910 190 aa13.61□□□□□ -0.23
TRAF4-201ENST00000262395 TRBV7-1A0A0A6YYK4 115 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 APOMO95445 188 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 ARL3P36405 182 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 GPHB5Q86YW7 130 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 TRAV12-1A0A0B4J245 112 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 TGFAP01135 160 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 ASIPP42127 132 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 DPH3P1Q9H4G8 78 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 PRO0461Q9UI25 63 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 FBXL19-AS1Q494R0 122 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 ZFP2Q6ZN57 461 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 OR10J6PQ8NGY7 276 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 UBTD1Q9HAC8 227 aa13.6□□□□□ -0.23
TRAF4-201ENST00000262395 RNF223E7ERA6 249 aa13.59□□□□□ -0.23
TRAF4-201ENST00000262395 U3KQE9 123 aa13.59□□□□□ -0.23
TRAF4-201ENST00000262395 BRD3OSQ6XYD6 125 aa13.59□□□□□ -0.23
TRAF4-201ENST00000262395 ZNF418Q8TF45 676 aaPredicted RBP13.59□□□□□ -0.23
TRAF4-201ENST00000262395 MUC4Q99102 2169 aa13.58□□□□□ -0.23
TRAF4-201ENST00000262395 PSMB2P49721 201 aa13.58□□□□□ -0.24
TRAF4-201ENST00000262395 C5orf56Q8N8D9 126 aa13.58□□□□□ -0.24
TRAF4-201ENST00000262395 SYT8Q8NBV8 401 aa13.58□□□□□ -0.24
TRAF4-201ENST00000262395 ITLN2Q8WWU7 325 aaPredicted RBP13.58□□□□□ -0.24
TRAF4-201ENST00000262395 BPESC1Q9GZL8 116 aa13.58□□□□□ -0.24
TRAF4-201ENST00000262395 TRAV41A0A0B4J266 112 aa13.58□□□□□ -0.24
TRAF4-201ENST00000262395 PTH2Q96A98 100 aa13.58□□□□□ -0.24
TRAF4-201ENST00000262395 MRPL53Q96EL3 112 aaKnown RBP13.58□□□□□ -0.24
TRAF4-201ENST00000262395 HIVEP3Q5T1R4 2406 aa13.58□□□□□ -0.24
TRAF4-201ENST00000262395 TRAV21A0A0B4J279 112 aa13.57□□□□□ -0.24
TRAF4-201ENST00000262395 RPL39P62891 51 aaKnown RBP13.57□□□□□ -0.24
TRAF4-201ENST00000262395 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
TRAF4-201ENST00000262395 NPFFO15130 113 aa13.57□□□□□ -0.24
TRAF4-201ENST00000262395 C9orf139Q6ZV77 190 aa13.57□□□□□ -0.24
TRAF4-201ENST00000262395 SPINK8P0C7L1 97 aa13.57□□□□□ -0.24
TRAF4-201ENST00000262395 A0A087WWL8 130 aa13.56□□□□□ -0.24
TRAF4-201ENST00000262395 LY6EQ16553 131 aa13.56□□□□□ -0.24
TRAF4-201ENST00000262395 C11orf86A6NJI1 115 aa13.56□□□□□ -0.24
TRAF4-201ENST00000262395 EDN2P20800 178 aa13.56□□□□□ -0.24
TRAF4-201ENST00000262395 CRYGDP07320 174 aa13.55□□□□□ -0.24
TRAF4-201ENST00000262395 RNASE3P12724 160 aaKnown RBP13.55□□□□□ -0.24
TRAF4-201ENST00000262395 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
TRAF4-201ENST00000262395 SMCPP49901 116 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-201ENST00000262395 CRYBG3Q68DQ2 2970 aa13.55□□□□□ -0.24
TRAF4-201ENST00000262395 LINC00477Q96M19 166 aa13.55□□□□□ -0.24
TRAF4-201ENST00000262395 F5H697 171 aa13.54□□□□□ -0.24
TRAF4-201ENST00000262395 MT-ATP8P03928 68 aa13.54□□□□□ -0.24
TRAF4-201ENST00000262395 TSPAN13O95857 204 aa13.53□□□□□ -0.24
TRAF4-201ENST00000262395 TSHBP01222 138 aa13.53□□□□□ -0.24
TRAF4-201ENST00000262395 GATA3P23771 443 aa13.53□□□□□ -0.24
TRAF4-201ENST00000262395 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.241e-10■■■■□ 22.1
TRAF4-201ENST00000262395 SPG11Q96JI7 2443 aa13.53□□□□□ -0.24
TRAF4-201ENST00000262395 SORL1Q92673 2214 aa13.53□□□□□ -0.24
TRAF4-201ENST00000262395 Q6ZS46 218 aa13.53□□□□□ -0.24
TRAF4-201ENST00000262395 LMO4P61968 165 aa13.52□□□□□ -0.24
TRAF4-201ENST00000262395 NFE4Q86UQ8 179 aa13.52□□□□□ -0.24
TRAF4-201ENST00000262395 TMEM170BQ5T4T1 132 aa13.52□□□□□ -0.25
TRAF4-201ENST00000262395 FAM74A4Q5TZK3 123 aa13.52□□□□□ -0.25
TRAF4-201ENST00000262395 COX6B1P14854 86 aa13.51□□□□□ -0.25
TRAF4-201ENST00000262395 FOXI1Q12951 378 aa13.51□□□□□ -0.25
TRAF4-201ENST00000262395 TSPEAR-AS2P59090 65 aa13.51□□□□□ -0.25
TRAF4-201ENST00000262395 NCOR2Q9Y618 2525 aa13.51□□□□□ -0.25
TRAF4-201ENST00000262395 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
TRAF4-201ENST00000262395 IGLV4-69A0A075B6H9 119 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 SOCS3O14543 225 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 IGKV3-20P01619 116 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 DLX4Q92988 240 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-201ENST00000262395 OPRPNQ99935 248 aaPredicted RBP13.5□□□□□ -0.25
TRAF4-201ENST00000262395 OVOL1O14753 267 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 PF4V1P10720 104 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 RNF183Q96D59 192 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 CDIP1Q9H305 208 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 SS18L2Q9UHA2 77 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 LENEPQ9Y5L5 61 aa13.5□□□□□ -0.25
TRAF4-201ENST00000262395 CHD8Q9HCK8 2581 aa13.49□□□□□ -0.25
TRAF4-201ENST00000262395 IGHV3-64A0A075B6Q5 118 aa13.49□□□□□ -0.25
TRAF4-201ENST00000262395 KLK9Q2XQG4 91 aa13.49□□□□□ -0.25
TRAF4-201ENST00000262395 KLK9Q9UKQ9 250 aa13.49□□□□□ -0.25
TRAF4-201ENST00000262395 ZNF256Q9Y2P7 627 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms