RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 ZFHX2Q9C0A1 2572 aaPredicted RBP3.8□□□□□ -1.8
RC3H1-201ENST00000258349 WT1-ASQ06250 92 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 IGLC7A0M8Q6 106 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 IGLV3-1P01715 115 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 COA6Q5JTJ3 125 aaKnown RBP3.8□□□□□ -1.8
RC3H1-201ENST00000258349 A0A0B4J2C4 111 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 Q6ZS92 163 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 C5orf24Q7Z6I8 188 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 CCL25O15444 150 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 CFC1P0CG37 223 aa3.8□□□□□ -1.8
RC3H1-201ENST00000258349 C1orf147Q96MC9 270 aaPredicted RBP3.8□□□□□ -1.8
RC3H1-201ENST00000258349 IGLC1P0CG04 106 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 IGFL3Q6UXB1 125 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 TEN1Q86WV5 123 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 TEX48A0A1B0GUV7 120 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 RUSC1-AS1Q66K80 236 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 WDR86Q86TI4 376 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 TRAV12-2A0A075B6T6 113 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 IGLV1-44P01699 117 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 H0YGX0 51 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 MLANAQ16655 118 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 ZNF747Q9BV97 191 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 NDUFS5O43920 106 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 IGKV1-39P01597 117 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 IGKV1D-39P04432 117 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 CRYBA4P53673 196 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 Q9H8V8 135 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 ANGP03950 147 aaKnown RBP3.79□□□□□ -1.8
RC3H1-201ENST00000258349 ZNRF2Q8NHG8 242 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 KAAG1Q9UBP8 84 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 C16orf74Q96GX8 76 aa3.79□□□□□ -1.8
RC3H1-201ENST00000258349 TINCRA0A1B0GVN0 87 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 DYNAPQ8N1N2 210 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 ZNRD1Q9P1U0 126 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 FOXE3Q13461 319 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 CR1LQ2VPA4 569 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 PCP2Q8IVA1 136 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 IGF2BP2-AS1Q96M15 143 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 SS18L2Q9UHA2 77 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 MP68P56378 58 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 MRPL36Q9P0J6 103 aaKnown RBP3.78□□□□□ -1.8
RC3H1-201ENST00000258349 NPBQ8NG41 125 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 K7EQD1 137 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 XCL1P47992 114 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 TOMM6Q96B49 74 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 LHBP01229 141 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 KRTAP27-1Q3LI81 207 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 KLF2Q9Y5W3 355 aaPredicted RBP3.78□□□□□ -1.8
RC3H1-201ENST00000258349 IGLL5B9A064 214 aa3.78□□□□□ -1.8
RC3H1-201ENST00000258349 FN1P02751 2386 aaKnown RBP3.78□□□□□ -1.8
RC3H1-201ENST00000258349 GNLYP22749 145 aa3.78□□□□□ -1.81
RC3H1-201ENST00000258349 COX7B2Q8TF08 81 aa3.78□□□□□ -1.81
RC3H1-201ENST00000258349 G3V318 75 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 LOXP28300 417 aaPredicted RBP3.77□□□□□ -1.81
RC3H1-201ENST00000258349 CTRLP40313 264 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 IGHV3-38A0A0C4DH36 116 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 WIPF3A6NGB9 483 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 G3V4G9 280 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 FAM120AOSQ5T036 256 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 Q8NFD4 153 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 KNCNA6PVL3 124 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 LINC01620Q4KN68 170 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 C3orf56Q8N813 242 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 NOP10Q9NPE3 64 aaKnown RBP3.77□□□□□ -1.81
RC3H1-201ENST00000258349 TPSG1Q9NRR2 321 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 FAM236AA0A1B0GUQ0 79 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 FAM236BA0A1B0GV22 79 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 ELANEP08246 267 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 DEFB121Q5J5C9 76 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 DUX4L9Q6RFH8 374 aaPredicted RBP3.77□□□□□ -1.81
RC3H1-201ENST00000258349 A0A1B0GX51 115 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 B5MCH6 92 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 GP9P14770 177 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 AMTNQ6UX39 209 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 CRYGCP07315 174 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 PDE6GP18545 87 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 PRR20EP86478 221 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 PRR20CP86479 221 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 PRR20DP86480 221 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 PRR20BP86481 221 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 PRR20AP86496 221 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 RNASE13Q5GAN3 156 aaKnown RBP3.77□□□□□ -1.81
RC3H1-201ENST00000258349 VPREB3Q9UKI3 123 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 CHKB-CPT1BH3BT56 60 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 ZFP2Q6ZN57 461 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 CLPSL2Q6UWE3 100 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 Q6ZR03 302 aa3.77□□□□□ -1.81
RC3H1-201ENST00000258349 Q71RC1 249 aaPredicted RBP3.77□□□□□ -1.81
RC3H1-201ENST00000258349 LGALS9O00182 355 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 OPRPNQ99935 248 aaPredicted RBP3.76□□□□□ -1.81
RC3H1-201ENST00000258349 IGLV3-9A0A075B6K5 115 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 BAALCQ8WXS3 180 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 DOPEY1Q5JWR5 2465 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 TLN1Q9Y490 2541 aaKnown RBP3.76□□□□□ -1.81
RC3H1-201ENST00000258349 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
RC3H1-201ENST00000258349 IGKV2-29A2NJV5 120 aaPredicted RBP3.76□□□□□ -1.81
RC3H1-201ENST00000258349 NXPH4O95158 308 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 PSMB8P28062 276 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms