RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TWIST1Q15672 202 aa6.92□□□□□ -1.3
NIP7-202ENST00000254941 Q8N1Y9 231 aa6.92□□□□□ -1.3
NIP7-202ENST00000254941 DEFB125Q8N687 156 aa6.92□□□□□ -1.3
NIP7-202ENST00000254941 XCL2Q9UBD3 114 aa6.92□□□□□ -1.3
NIP7-202ENST00000254941 ANK2Q01484 3957 aa6.91□□□□□ -1.3
NIP7-202ENST00000254941 GIG44P09565 113 aaPredicted RBP6.91□□□□□ -1.3
NIP7-202ENST00000254941 CACNG7P62955 275 aa6.91□□□□□ -1.3
NIP7-202ENST00000254941 LINC00467Q9BRT7 94 aa6.91□□□□□ -1.3
NIP7-202ENST00000254941 MSRB1Q9NZV6 116 aa6.91□□□□□ -1.3
NIP7-202ENST00000254941 TP53TG3Q9ULZ0 132 aa6.91□□□□□ -1.3
NIP7-202ENST00000254941 IGHV3-16A0A0C4DH30 117 aa6.9□□□□□ -1.3
NIP7-202ENST00000254941 PRR31Q5SQ13 230 aa6.9□□□□□ -1.3
NIP7-202ENST00000254941 SPANXN1Q5VSR9 72 aa6.9□□□□□ -1.3
NIP7-202ENST00000254941 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.3
NIP7-202ENST00000254941 TMEM256Q8N2U0 113 aa6.9□□□□□ -1.3
NIP7-202ENST00000254941 TMEM191AQ9H0A3 160 aa6.9□□□□□ -1.3
NIP7-202ENST00000254941 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.3
NIP7-202ENST00000254941 TRGV11A0A075B6L2 103 aa6.9□□□□□ -1.31
NIP7-202ENST00000254941 S100A6P06703 90 aa6.9□□□□□ -1.31
NIP7-202ENST00000254941 RPL35AP18077 110 aaKnown RBP6.9□□□□□ -1.31
NIP7-202ENST00000254941 KIAA1644Q3SXP7 199 aa6.9□□□□□ -1.31
NIP7-202ENST00000254941 OXLD1Q5BKU9 147 aa6.9□□□□□ -1.31
NIP7-202ENST00000254941 C1orf158Q8N1D5 194 aa6.9□□□□□ -1.31
NIP7-202ENST00000254941 C9orf85Q96MD7 179 aa6.9□□□□□ -1.31
NIP7-202ENST00000254941 C1QTNF4Q9BXJ3 329 aa6.9□□□□□ -1.31
NIP7-202ENST00000254941 MDFICQ9P1T7 246 aa6.9□□□□□ -1.31
NIP7-202ENST00000254941 TIMM8BQ9Y5J9 83 aaPredicted RBP6.9□□□□□ -1.31
NIP7-202ENST00000254941 LOC102724200A0A096LPH7 203 aaPredicted RBP6.89□□□□□ -1.31
NIP7-202ENST00000254941 CBY3A6NI87 242 aa6.89□□□□□ -1.31
NIP7-202ENST00000254941 NXPH4O95158 308 aa6.89□□□□□ -1.31
NIP7-202ENST00000254941 FAM104BQ5XKR9 115 aa6.89□□□□□ -1.31
NIP7-202ENST00000254941 LINC01587Q99440 93 aa6.89□□□□□ -1.31
NIP7-202ENST00000254941 NBEAL2Q6ZNJ1 2754 aa6.89□□□□□ -1.31
NIP7-202ENST00000254941 C5orf52A6NGY3 159 aa6.88□□□□□ -1.31
NIP7-202ENST00000254941 M0R381 172 aa6.88□□□□□ -1.31
NIP7-202ENST00000254941 HTN1P15515 57 aa6.88□□□□□ -1.31
NIP7-202ENST00000254941 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
NIP7-202ENST00000254941 COA6Q5JTJ3 125 aaKnown RBP6.88□□□□□ -1.31
NIP7-202ENST00000254941 CSNK1G2-AS1Q8NCQ2 148 aa6.88□□□□□ -1.31
NIP7-202ENST00000254941 MDFIQ99750 246 aa6.88□□□□□ -1.31
NIP7-202ENST00000254941 NACAE9PAV3 2078 aa6.88□□□□□ -1.31
NIP7-202ENST00000254941 J3QL48 77 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 SPRY2O43597 315 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 EVI2AP22794 236 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 SRIP30626 198 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 NDUFA6P56556 154 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 SNRPEP62304 92 aaKnown RBP6.87□□□□□ -1.31
NIP7-202ENST00000254941 AMN1Q8IY45 258 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 ALKBH7Q9BT30 221 aaPredicted RBP6.87□□□□□ -1.31
NIP7-202ENST00000254941 TMEM208Q9BTX3 173 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 CSTL1Q9H114 145 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 NBEAL1Q6ZS30 2694 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 NOTCH1P46531 2555 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 PRM2P04554 102 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 SMIM15Q7Z3B0 74 aa6.87□□□□□ -1.31
NIP7-202ENST00000254941 LOC105371267A0A1B0GV96 52 aa6.86□□□□□ -1.31
NIP7-202ENST00000254941 RAB4AP20338 218 aa6.86□□□□□ -1.31
NIP7-202ENST00000254941 ZNF415Q09FC8 603 aa6.86□□□□□ -1.31
NIP7-202ENST00000254941 Q0VG73 95 aa6.86□□□□□ -1.31
NIP7-202ENST00000254941 MRPL51Q4U2R6 128 aaKnown RBP6.86□□□□□ -1.31
NIP7-202ENST00000254941 OR10J3Q5JRS4 329 aa6.86□□□□□ -1.31
NIP7-202ENST00000254941 ZNF705AQ6ZN79 300 aaPredicted RBP6.86□□□□□ -1.31
NIP7-202ENST00000254941 C11orf72Q8NBR9 251 aa6.86□□□□□ -1.31
NIP7-202ENST00000254941 RNF185Q96GF1 192 aa6.86□□□□□ -1.31
NIP7-202ENST00000254941 ZMAT5Q9UDW3 170 aaKnown RBP6.86□□□□□ -1.31
NIP7-202ENST00000254941 GOLT1BQ9Y3E0 138 aa6.86□□□□□ -1.31
NIP7-202ENST00000254941 IGHV3OR16-12A0A075B7B8 117 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 KIR2DL5BA0A0G2JN68 375 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 KIR2DL5BA0A0G2JPC4 375 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 UBE2CO00762 179 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 HOXA5P20719 270 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 KRTAP10-11P60412 298 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 KIR2DL5AQ8N109 375 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 SYT8Q8NBV8 401 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 KIR2DL5BQ8NHK3 375 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 C18orf32Q8TCD1 76 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 AP1S3Q96PC3 154 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 U3KQK5 164 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 AZU1P20160 251 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 ZNF876PQ49A33 203 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 PIK3CD-AS1Q5SR53 167 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 ORMDL3Q8N138 153 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 RNASE8Q8TDE3 154 aaKnown RBP6.85□□□□□ -1.31
NIP7-202ENST00000254941 TMEM263Q8WUH6 116 aaKnown RBP6.85□□□□□ -1.31
NIP7-202ENST00000254941 PTH2Q96A98 100 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 SPXQ9BT56 116 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 GSN-AS1Q9NRJ2 163 aa6.85□□□□□ -1.31
NIP7-202ENST00000254941 D6R8Y8 96 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 M0R2P5 195 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 PPBPP02775 128 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 IGHV4-30-4P0DP06 118 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 XP32Q5T750 250 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 LURAP1LQ8IV03 231 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 C14orf178Q8N769 122 aaPredicted RBP6.84□□□□□ -1.31
NIP7-202ENST00000254941 RCHY1Q96PM5 261 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 DPH3P1Q9H4G8 78 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 KIF25-AS1Q9Y6Z4 181 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 MGAM2Q2M2H8 2515 aa6.84□□□□□ -1.31
NIP7-202ENST00000254941 G3V4G9 280 aa6.83□□□□□ -1.32
NIP7-202ENST00000254941 CKS2P33552 79 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms