RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PMVKQ15126 192 aa10.51□□□□□ -0.73
GABPB1-201ENST00000220429 MYOZ3Q8TDC0 251 aa10.51□□□□□ -0.73
GABPB1-201ENST00000220429 ENSAO43768 121 aaKnown RBP10.5□□□□□ -0.73
GABPB1-201ENST00000220429 VMA21Q3ZAQ7 101 aa10.5□□□□□ -0.73
GABPB1-201ENST00000220429 DUX3Q96PT4 197 aa10.5□□□□□ -0.73
GABPB1-201ENST00000220429 HIVEP3Q5T1R4 2406 aa10.5□□□□□ -0.73
GABPB1-201ENST00000220429 MRPS12O15235 138 aaKnown RBP10.5□□□□□ -0.73
GABPB1-201ENST00000220429 ABCA1O95477 2261 aa10.5□□□□□ -0.73
GABPB1-201ENST00000220429 EBI3Q14213 229 aa10.5□□□□□ -0.73
GABPB1-201ENST00000220429 C4orf26Q17RF5 130 aa10.5□□□□□ -0.73
GABPB1-201ENST00000220429 H3BMM0 161 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 CFC1BP0CG36 223 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 CFC1P0CG37 223 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 GAGE2AQ6NT46 116 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 IGFBPL1Q8WX77 278 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 UBE2WQ96B02 151 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 ZNF815PA8K554 130 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 CNTFRP26992 372 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 HLA-DMBP28068 263 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 CRIP1P50238 77 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 CEMP1Q6PRD7 247 aaPredicted RBP10.49□□□□□ -0.73
GABPB1-201ENST00000220429 HRCT1Q6UXD1 115 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 ASCL2Q99929 193 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 SLC25A39Q9BZJ4 359 aaPredicted RBP10.49□□□□□ -0.73
GABPB1-201ENST00000220429 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 LY6HO94772 140 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 IGHV3-48P01763 117 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 HOXB4P17483 251 aaPredicted RBP10.49□□□□□ -0.73
GABPB1-201ENST00000220429 PLEKHB2Q96CS7 222 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 OTORQ9NRC9 128 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 MRPL36Q9P0J6 103 aaKnown RBP10.49□□□□□ -0.73
GABPB1-201ENST00000220429 PRO1854Q9UHT4 67 aa10.49□□□□□ -0.73
GABPB1-201ENST00000220429 GP9P14770 177 aa10.48□□□□□ -0.73
GABPB1-201ENST00000220429 LINC01600Q96MT4 127 aa10.48□□□□□ -0.73
GABPB1-201ENST00000220429 IMUPQ9GZP8 106 aa10.48□□□□□ -0.73
GABPB1-201ENST00000220429 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
GABPB1-201ENST00000220429 IGKV1D-37A0A075B6S9 117 aa10.48□□□□□ -0.73
GABPB1-201ENST00000220429 BUB1B-PAK6H3BSN5 160 aa10.48□□□□□ -0.73
GABPB1-201ENST00000220429 SPANXDQ9BXN6 97 aa10.48□□□□□ -0.73
GABPB1-201ENST00000220429 IGHV1-3A0A0C4DH29 117 aa10.47□□□□□ -0.73
GABPB1-201ENST00000220429 CRYGBP07316 175 aa10.47□□□□□ -0.73
GABPB1-201ENST00000220429 COX7A1P24310 79 aa10.47□□□□□ -0.73
GABPB1-201ENST00000220429 SUB1P53999 127 aaKnown RBP eCLIP10.47□□□□□ -0.73
GABPB1-201ENST00000220429 FAM240AA0A1B0GVK7 77 aa10.47□□□□□ -0.73
GABPB1-201ENST00000220429 F8VRH5 84 aa10.47□□□□□ -0.73
GABPB1-201ENST00000220429 H7C1H1 209 aa10.47□□□□□ -0.73
GABPB1-201ENST00000220429 RUSC1-AS1Q66K80 236 aa10.47□□□□□ -0.73
GABPB1-201ENST00000220429 CSMD1Q96PZ7 3565 aa10.47□□□□□ -0.73
GABPB1-201ENST00000220429 GAS8-AS1O95177 125 aa10.46□□□□□ -0.73
GABPB1-201ENST00000220429 ORM1P02763 201 aa10.46□□□□□ -0.73
GABPB1-201ENST00000220429 LINC01620Q4KN68 170 aa10.46□□□□□ -0.73
GABPB1-201ENST00000220429 EXOC3-AS1Q8N2X6 119 aa10.46□□□□□ -0.73
GABPB1-201ENST00000220429 ITPR1Q14643 2758 aa10.46□□□□□ -0.74
GABPB1-201ENST00000220429 HCP5Q6MZN7 132 aa10.46□□□□□ -0.74
GABPB1-201ENST00000220429 LINC00527Q9UJ94 153 aa10.46□□□□□ -0.74
GABPB1-201ENST00000220429 APELAP0DMC3 54 aa10.45□□□□□ -0.74
GABPB1-201ENST00000220429 ATXN8Q156A1 80 aa10.45□□□□□ -0.74
GABPB1-201ENST00000220429 THAP8Q8NA92 274 aa10.45□□□□□ -0.74
GABPB1-201ENST00000220429 RPL27AP46776 148 aaKnown RBP10.45□□□□□ -0.74
GABPB1-201ENST00000220429 Q8N8P6 123 aa10.45□□□□□ -0.74
GABPB1-201ENST00000220429 RNF185Q96GF1 192 aa10.45□□□□□ -0.74
GABPB1-201ENST00000220429 TRBV10-2A0A0K0K1G8 114 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 CRYGAP11844 174 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 PVRIGQ6DKI7 326 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 C11orf71Q6IPW1 123 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 DTX2Q86UW9 622 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 TMEM75Q8N9X5 138 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 LY6G5BQ8NDX9 201 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 DPH3Q96FX2 82 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 WNK2Q9Y3S1 2297 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 OVOL1O14753 267 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 COX7CP15954 63 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 SRSF2Q01130 221 aaKnown RBP10.44□□□□□ -0.74
GABPB1-201ENST00000220429 SVEP1Q4LDE5 3571 aa10.44□□□□□ -0.74
GABPB1-201ENST00000220429 TRAV12-1A0A0B4J245 112 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 LY6LH3BQJ8 138 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 ATP5G1P05496 136 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 CFHR4Q92496 578 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 J3QLI3 93 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 CRYGDP07320 174 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 P0DMU3 169 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 FAM231AP0DMU4 169 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 FAM231CP0DMU5 169 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 SLC25A16P16260 332 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 Q5XG85 94 aa10.43□□□□□ -0.74
GABPB1-201ENST00000220429 MED13LQ71F56 2210 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 IGLV2-18A0A075B6J9 118 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 TEX22C9J3V5 150 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 COX6B1P14854 86 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 LAGE3Q14657 143 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 TMEM190Q8WZ59 177 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 IGHV3-21A0A0B4J1V1 117 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 IGHV3-30P01768 117 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 IGHV3-30-5P0DP03 117 aa10.42□□□□□ -0.74
GABPB1-201ENST00000220429 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
GABPB1-201ENST00000220429 ZNF256Q9Y2P7 627 aaPredicted RBP10.42□□□□□ -0.74
GABPB1-201ENST00000220429 A0A0J9YY99 117 aa10.41□□□□□ -0.74
GABPB1-201ENST00000220429 IGHV4-39P01824 125 aa10.41□□□□□ -0.74
GABPB1-201ENST00000220429 C8orf49Q96NF6 230 aa10.41□□□□□ -0.74
GABPB1-201ENST00000220429 TRACP01848 142 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms