RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Ighv5-4A0A075B5P9 117 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Sc5dO88822 299 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 P01638 115 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Fam219bQ14DQ1 197 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Ankrd55Q8BLD6 626 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Pf4Q9Z126 105 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 AponG3X9D6 251 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Gstp1P19157 210 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Gm9733Q1AN91 178 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Cops9Q3U898 57 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Gm10912Q3UXH0 145 aa15.09■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Scgb1b24B1B0N6 92 aa15.08■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 CampP51437 172 aa15.08■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Gm6812B1AXU1 112 aa15.08■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 1700020N15RikL7MTX3 112 aa15.08■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Dnajb12Q9QYI4 376 aaKnown RBP15.08■□□□□ 0.01
Col4a3bp-202ENSMUST00000109444 Osr1Q9WVG7 266 aa15.08■□□□□ 0
Col4a3bp-202ENSMUST00000109444 P01657 111 aa15.08■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Lcn2P11672 200 aa15.08■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Cd81P35762 236 aa15.08■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Gm21394Q497R7 227 aa15.08■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Sfxn3Q91V61 321 aa15.08■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Tmem189Q99LQ7 271 aa15.08■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Fbln5Q9WVH9 448 aa15.08■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Hist3h2bbQ8CGP0 126 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Hist3h2baQ9D2U9 126 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 CrygsO35486 178 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Dnase2P56542 353 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Atp6v0cP63082 155 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Ormdl3Q9CPZ6 153 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 BC030500E9Q6W0 185 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Olfr553Q7TRS6 326 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Rspo4Q8BJ73 228 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Lrrc25Q8K1T1 297 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Derl1Q99J56 251 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Wbp2nlQ9D529 359 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Adamts17E9Q4D1 1122 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 PpyP10601 100 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Cypt1Q8CH20 168 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Ssbp3Q9D032 388 aa15.07■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Defa3P28310 93 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Defa10P50708 93 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Defa15P50713 93 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Bsph1Q3UW26 133 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Foxl1Q64731 336 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Vkorc1l1Q6TEK5 176 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Cd200r1lQ6XJV6 249 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Neurl3Q8CJC5 254 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 1700015F17RikD3YUK8 150 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Rnase2bO35292 155 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Ighv6-3A0A075B5T2 118 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Cnn3Q9DAW9 330 aaKnown RBP15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Gm6525A0A0A6YW33 106 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Ighv1-76A0A0G2JFE9 117 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Gm21789J3QMZ1 123 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Gm21870J3QPN2 123 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Gm21883J3QPV3 123 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Hist1h2bfP10853 126 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 St6galnac2P70277 373 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Hist1h2bbQ64475 126 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Hist1h2bkQ8CGP1 126 aaKnown RBP15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Hist1h2bpQ8CGP2 126 aaKnown RBP15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Chrdl2Q8VEA6 426 aa15.06■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Gm45844A0A1B0GRQ2 137 aa15.05■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Gm4791J3QQ14 102 aa15.05■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Mpv17P19258 176 aa15.05■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Reep5Q60870 185 aa15.05■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Ypel2Q65Z95 119 aa15.05■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Ypel1Q9ESC7 118 aa15.05■□□□□ 0
Col4a3bp-202ENSMUST00000109444 Trav16A0A075B653 116 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Ighv8-9A0A0G2JET1 119 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Rps2-ps6A0A140T8L5 221 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Znf385cA2A5E6 429 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Ren2P00796 401 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Zglp1Q1WG82 266 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Dynlrb2Q9DAJ5 96 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Ighv5-16A0A0B4J1P4 117 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Tmem170bP86050 132 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Fam117aQ7TNF9 451 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Nrn1Q8CFV4 142 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Hoxd11P23813 323 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Supt4h1aP63271 117 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Nup37Q9CWU9 326 aa15.05■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Igkv6-14A0A140T8P1 115 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Trav15-1-dv6-1Q5R1D2 117 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Slc25a47Q6IS41 310 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Smap2Q7TN29 428 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Olfr466E9Q2B9 308 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 P18530 117 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Olfr150Q60895 312 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Olfr1350Q8VF34 308 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 ChodlQ9CXM0 273 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Tnfsf11O35235 316 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Zfp874bQ7M6X2 447 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Prss46Q5M8S2 314 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Ammecr1lQ8JZZ6 310 aa15.04■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Rpl36-ps4A0A140T8U4 117 aa15.03■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Siglec15A7E1W8 342 aa15.03■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Gm21616B6ZB74 166 aa15.03■□□□□ -0
Col4a3bp-202ENSMUST00000109444 Ascl2O35885 263 aa15.03■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms