RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 CampP51437 172 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Cd200r4Q6XJV4 270 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Prss29Q99MS4 279 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tmem160Q9D938 188 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm9772F6XPD8 135 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Bak1O08734 209 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Q3UNZ8 350 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Srd5a2Q99N99 254 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 5530401A14RikQ9D3H9 131 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 1700067P10RikG3X8U2 183 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Tspan7Q62283 249 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm5868Q8BJG1 145 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 D630044L22RikQ8C701 164 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Poc1aQ8JZX3 405 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Zfand6Q9DCH6 223 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Psg18B2RSG7 476 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Sox15P43267 231 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Rnase9P60154 184 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trbv15A0A0A6YYE3 115 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm2381G3UY53 305 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Cxcl2P10889 100 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Hapln4Q80WM4 400 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Wdr82Q8BFQ4 313 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Klf7Q99JB0 301 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Prr23a3Q9CWP9 254 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ssbp3Q9D032 388 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Igkv10-94A0A075B5L1 115 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr556E9Q549 324 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ren2P00796 401 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 P01746 140 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Mex3bQ69Z36 601 aaKnown RBP10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr1382Q7TQT3 311 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Mixl1Q9WUI0 231 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Tmem196V9GX04 182 aa10.21□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ascl2O35885 263 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm12888Q3UW77 119 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Vmn1r216Q8R257 298 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr476Q8VGI4 310 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm17732E9Q5I2 61 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trav15-1-dv6-1Q5R1D2 117 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Bricd5Q8BV89 174 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Tmem189Q99LQ7 271 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Rnase2O35291 155 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Pet100P0DJE0 76 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Fam3dP97805 223 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Iah1Q9DB29 249 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 P01679 107 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr195Q8VGQ6 308 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Il1f10Q8R459 152 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ormdl3Q9CPZ6 153 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Erg28Q9ERY9 140 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Igkv12-38A0A0G2JEI7 115 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 GzmbP04187 247 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ss18Q62280 418 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 SdhdQ9CXV1 159 aa10.2□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm8251F6VUT6 1994 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Rnf212F6TQD1 307 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 AcacaQ5SWU9 2345 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ighv6-4A0A0A6YX19 119 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Chchd2Q9D1L0 153 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 IcosQ9WVS0 200 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trdv5A0A075B661 115 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ankrd55Q8BLD6 626 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gatad1Q920S3 266 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Mmp23O88676 391 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Nup35Q8R4R6 325 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Fgf5P15656 264 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ptpn18Q61152 453 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Sdf2l1Q9ESP1 221 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Greb1Q3UHK3 1954 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Igkv6-20A0A140T8P2 115 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr1337A2ACY8 315 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm17727E9Q4V7 109 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Itgb1bp1O35671 200 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Psg17Q62056 475 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 TifabQ8JZM6 147 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Spcs1Q9D958 161 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trav12-1A0N8R1 115 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Sc5dO88822 299 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Defa26Q3L180 93 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Trav3-3Q5R1C3 114 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Gm1553Q66VB7 94 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 EppinQ9DA01 134 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 RprmQ9JJ72 109 aa10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Suclg1Q9WUM5 346 aaKnown RBP10.19□□□□□ -0.78
Trim56-201ENSMUST00000054384 Mrpl23O35972 146 aaKnown RBP10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Prss28Q924N9 274 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Zswim8Q3UHH1 1832 aaKnown RBP10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ssc4dA1L0T3 586 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Zfp764E9QAP1 431 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Vamp8O70404 101 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 MosP00536 390 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ube2zQ3UE37 356 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Elovl5Q8BHI7 299 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr559Q8VH14 318 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Hyls1Q9CXX0 307 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Ntn3Q9R1A3 580 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Zfp976E9Q981 636 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Vmn1r235Q8R297 328 aa10.18□□□□□ -0.78
Trim56-201ENSMUST00000054384 Olfr1323Q8VF35 309 aa10.18□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 123.3 ms