RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 Q6AWC8 147 aa10.65□□□□□ -0.7
SCARB2-227ENST00000640957 CARD19Q96LW7 228 aa10.65□□□□□ -0.7
SCARB2-227ENST00000640957 BEX4Q9NWD9 120 aaPredicted RBP10.65□□□□□ -0.7
SCARB2-227ENST00000640957 ARL3P36405 182 aa10.65□□□□□ -0.7
SCARB2-227ENST00000640957 HIGD1BQ9P298 99 aa10.65□□□□□ -0.7
SCARB2-227ENST00000640957 IGHV3-64A0A075B6Q5 118 aa10.64□□□□□ -0.71
SCARB2-227ENST00000640957 TMEM14CQ9P0S9 112 aa10.64□□□□□ -0.71
SCARB2-227ENST00000640957 TIMM23O14925 209 aa10.64□□□□□ -0.71
SCARB2-227ENST00000640957 SPANXN1Q5VSR9 72 aa10.64□□□□□ -0.71
SCARB2-227ENST00000640957 RAXQ9Y2V3 346 aa10.64□□□□□ -0.71
SCARB2-227ENST00000640957 C2CD3Q4AC94 2353 aa10.64□□□□□ -0.71
SCARB2-227ENST00000640957 TCF15Q12870 199 aa10.64□□□□□ -0.71
SCARB2-227ENST00000640957 C1QTNF4Q9BXJ3 329 aa10.64□□□□□ -0.71
SCARB2-227ENST00000640957 IGF1P05019 195 aa10.63□□□□□ -0.71
SCARB2-227ENST00000640957 KLRD1Q13241 179 aa10.63□□□□□ -0.71
SCARB2-227ENST00000640957 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
SCARB2-227ENST00000640957 RPL39LQ96EH5 51 aaKnown RBP10.63□□□□□ -0.71
SCARB2-227ENST00000640957 ZMAT4Q9H898 229 aa10.63□□□□□ -0.71
SCARB2-227ENST00000640957 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.63□□□□□ -0.71
SCARB2-227ENST00000640957 SCGB3A1Q96QR1 104 aa10.63□□□□□ -0.71
SCARB2-227ENST00000640957 PRADC1Q9BSG0 188 aa10.63□□□□□ -0.71
SCARB2-227ENST00000640957 PTPN13Q12923 2485 aa10.63□□□□□ -0.71
SCARB2-227ENST00000640957 CD3EP07766 207 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 LGALS1P09382 135 aaKnown RBP10.62□□□□□ -0.71
SCARB2-227ENST00000640957 GATA4P43694 442 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 NXT2Q9NPJ8 142 aaKnown RBP10.62□□□□□ -0.71
SCARB2-227ENST00000640957 TRBV7-3A0A075B6L6 115 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 E7EQL1 145 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 MGPP08493 103 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 CRIP2P52943 208 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-227ENST00000640957 LAGE3Q14657 143 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 INS-IGF2F8WCM5 200 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 MRPS12O15235 138 aaKnown RBP10.62□□□□□ -0.71
SCARB2-227ENST00000640957 TSPAN13O95857 204 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 CFAP126Q5VTH2 177 aa10.62□□□□□ -0.71
SCARB2-227ENST00000640957 TCL1BO95988 128 aa10.61□□□□□ -0.71
SCARB2-227ENST00000640957 THBDP07204 575 aa10.61□□□□□ -0.71
SCARB2-227ENST00000640957 RPL7P18124 248 aaKnown RBP10.61□□□□□ -0.71
SCARB2-227ENST00000640957 TCTEX1D4Q5JR98 221 aa10.61□□□□□ -0.71
SCARB2-227ENST00000640957 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
SCARB2-227ENST00000640957 DLX4Q92988 240 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-227ENST00000640957 LINC00574Q9H8X3 128 aa10.61□□□□□ -0.71
SCARB2-227ENST00000640957 SMAD5-AS1Q9Y6J3 95 aa10.61□□□□□ -0.71
SCARB2-227ENST00000640957 FABP5P3A8MUU1 101 aa10.61□□□□□ -0.71
SCARB2-227ENST00000640957 IGLC6P0CF74 106 aa10.61□□□□□ -0.71
SCARB2-227ENST00000640957 NDPQ00604 133 aa10.61□□□□□ -0.71
SCARB2-227ENST00000640957 ATP5LO75964 103 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 TEX36Q5VZQ5 186 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 ASCL5Q7RTU5 278 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 A0A087WX48 190 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 IGHG4P01861 327 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 Q6ZS46 218 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 SMIM20Q8N5G0 67 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 AJUBAQ96IF1 538 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 CCL21O00585 134 aa10.6□□□□□ -0.71
SCARB2-227ENST00000640957 C14orf178Q8N769 122 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-227ENST00000640957 CSMD2Q7Z408 3487 aa10.59□□□□□ -0.71
SCARB2-227ENST00000640957 TRAV8-2A0A0B4J237 113 aa10.59□□□□□ -0.71
SCARB2-227ENST00000640957 CRLF1O75462 422 aa10.59□□□□□ -0.71
SCARB2-227ENST00000640957 ANKRD29Q8N6D5 301 aa10.59□□□□□ -0.71
SCARB2-227ENST00000640957 Q8N8P6 123 aa10.59□□□□□ -0.71
SCARB2-227ENST00000640957 GATD1Q8NB37 220 aa10.59□□□□□ -0.71
SCARB2-227ENST00000640957 BUB1B-PAK6H3BSN5 160 aa10.59□□□□□ -0.71
SCARB2-227ENST00000640957 SCGB2A1O75556 95 aa10.59□□□□□ -0.71
SCARB2-227ENST00000640957 CCDC179H3BU77 68 aa10.58□□□□□ -0.72
SCARB2-227ENST00000640957 TMEM155Q4W5P6 130 aa10.58□□□□□ -0.72
SCARB2-227ENST00000640957 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
SCARB2-227ENST00000640957 C9JAW5 83 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 CRYGBP07316 175 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 TEX29Q8N6K0 151 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 TRAV4A0A0B4J268 109 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 IGHV4-39P01824 125 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 HERV-K104P63124 156 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 BSNQ9UPA5 3926 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 IGLV2-18A0A075B6J9 118 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 C21orf62Q9NYP8 219 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 CCDC168Q8NDH2 2452 aa10.57□□□□□ -0.72
SCARB2-227ENST00000640957 MYO9AB2RTY4 2548 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 F8VRH5 84 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 H7C1H1 209 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 ERG28Q9UKR5 140 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 COL27A1Q8IZC6 1860 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-227ENST00000640957 DLX6P56179 175 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 ECSCRQ19T08 205 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 TMEM170BQ5T4T1 132 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 IGFL3Q6UXB1 125 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 NRACQ8N912 160 aa10.56□□□□□ -0.72
SCARB2-227ENST00000640957 CEACAM4O75871 244 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 SRSF1Q07955 248 aaKnown RBP eCLIP10.55□□□□□ -0.72
SCARB2-227ENST00000640957 ZFAND6Q6FIF0 208 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 FANCD2OSQ96PS1 177 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 LINC00527Q9UJ94 153 aa10.55□□□□□ -0.72
SCARB2-227ENST00000640957 SONP18583 2426 aaKnown RBP10.55□□□□□ -0.72
SCARB2-227ENST00000640957 LRRK2Q5S007 2527 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms