RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 USP34Q70CQ2 3546 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 TRAV2A0A0B4J234 112 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 C2orf70A6NJV1 201 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 BRI3O95415 125 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 LTAP01374 205 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 FOXA3P55318 350 aaPredicted RBP4.27□□□□□ -1.73
CHD2-227ENST00000637572 HILS1P60008 231 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 SLAQ13239 276 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 NUP35Q8NFH5 326 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 MRAP2Q96G30 205 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 GEMIN7Q9H840 131 aaKnown RBP4.27□□□□□ -1.73
CHD2-227ENST00000637572 CYSLTR1Q9Y271 337 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.27□□□□□ -1.73
CHD2-227ENST00000637572 IFI27P40305 119 aaPredicted RBP4.27□□□□□ -1.73
CHD2-227ENST00000637572 SCGB1D4Q6XE38 83 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 PMCHL2Q9BQD1 86 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 C20orf144Q9BQM9 153 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 C19orf73Q9NVV2 129 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 A0A1W2PPR1 153 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 E7EUB6 86 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 H3BRM9 83 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 VCYO14598 125 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 HBDP02042 147 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 RPL35AP18077 110 aaKnown RBP4.27□□□□□ -1.73
CHD2-227ENST00000637572 PATE2Q6UY27 113 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 ZNF493Q6ZR52 646 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 CYYR1Q96J86 154 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 SCGB3A1Q96QR1 104 aa4.27□□□□□ -1.73
CHD2-227ENST00000637572 MAP1AP78559 2803 aaPredicted RBP4.26□□□□□ -1.73
CHD2-227ENST00000637572 LINC00614P0C842 121 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 ATRAIDQ6UW56 229 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 RNF182Q8N6D2 247 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 KIAA1549Q9HCM3 1950 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 IGHV4OR15-8A0A075B7B6 117 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 A0A087WW49 117 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 TRGV1A0A0A0MS02 117 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 IFITM10A6NMD0 228 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 ARMS2P0C7Q2 107 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 CRIP2P52943 208 aaPredicted RBP4.26□□□□□ -1.73
CHD2-227ENST00000637572 EMP1P54849 157 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 SSBP2P81877 361 aaPredicted RBP4.26□□□□□ -1.73
CHD2-227ENST00000637572 ERCC8Q13216 396 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 CIRBPQ14011 172 aaKnown RBP4.26□□□□□ -1.73
CHD2-227ENST00000637572 ERASQ7Z444 233 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 FAM167A-AS1Q96KT0 104 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 DOCK11Q5JSL3 2073 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 NDUFA7O95182 113 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 TYMSP04818 313 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 IGFL4Q6B9Z1 124 aa4.26□□□□□ -1.73
CHD2-227ENST00000637572 COLCA2A8K830 154 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 CIDEAO60543 219 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 SEC11AP67812 179 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 TRPT1Q86TN4 253 aaKnown RBP4.25□□□□□ -1.73
CHD2-227ENST00000637572 KLK15Q9H2R5 256 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 COL12A1Q99715 3063 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 IGKV1OR2-108A0A075B7D4 117 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 TMEM262E9PQX1 116 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 CA1P00915 261 aaPredicted RBP4.25□□□□□ -1.73
CHD2-227ENST00000637572 HOXA5P20719 270 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 SLURP1P55000 103 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 SUMO2P61956 95 aaKnown RBP4.25□□□□□ -1.73
CHD2-227ENST00000637572 SPINK13Q1W4C9 94 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 ZNF876PQ49A33 203 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 LINC00479Q96M42 142 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 KLF12Q9Y4X4 402 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 UBE2CO00762 179 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 TRIAP1O43715 76 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 CXCL1P09341 107 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 C9orf47Q6ZRZ4 202 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 Q6ZSV7 163 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 WIPF2Q8TF74 440 aaPredicted RBP4.25□□□□□ -1.73
CHD2-227ENST00000637572 AGPAT4-IT1Q9H0P7 198 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 IGKV1D-37A0A075B6S9 117 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 SMIM27A0A1W2PRY6 76 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 IGLC2P0DOY2 106 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 LAGE3Q14657 143 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 ODF3Q96PU9 254 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 MIEN1Q9BRT3 115 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 VCX2Q9H322 139 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 XCL2Q9UBD3 114 aa4.25□□□□□ -1.73
CHD2-227ENST00000637572 A8MWP6 167 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 ZNF324O75467 553 aaPredicted RBP4.24□□□□□ -1.73
CHD2-227ENST00000637572 ADCYAP1P18509 176 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 PPIFP30405 207 aaKnown RBP4.24□□□□□ -1.73
CHD2-227ENST00000637572 UTF1Q5T230 341 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 ZNF256Q9Y2P7 627 aaPredicted RBP4.24□□□□□ -1.73
CHD2-227ENST00000637572 MUC21A0A0G2JKD1 596 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 MUC21A0A140T8X8 626 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 A6NDN8 102 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 MED14OSP0DP75 135 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 LGALS3P17931 250 aaKnown RBP4.24□□□□□ -1.73
CHD2-227ENST00000637572 PSMB8P28062 276 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 SRSF9Q13242 221 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHD2-227ENST00000637572 V9GYV3 84 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 ARFGEF3Q5TH69 2177 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 C9JQL5 133 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 K7EMI3 77 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 GZMBP10144 247 aa4.24□□□□□ -1.73
CHD2-227ENST00000637572 HTN3P15516 51 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms