RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 SRSF2Q01130 221 aaKnown RBP6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 Q71RC1 249 aaPredicted RBP6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 LINC01560Q8TB33 94 aa6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 OOSP1A8MZH6 123 aa6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 RNASE4P34096 147 aaKnown RBP6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 TRAV12-1A0A0B4J245 112 aa6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 RBAKDNA6NC62 111 aa6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 FAM74A4Q5TZK3 123 aa6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 MAPKAPK5-AS1Q8N8E1 139 aa6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 HHLA3Q9XRX5 114 aa6.53□□□□□ -1.36
SMARCA2-246ENST00000635739 PRSS29PA6NIE9 313 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 C9JAW5 83 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 TRGV3P03979 118 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 CRYBA4P53673 196 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 EMP1P54849 157 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 C9orf139Q6ZV77 190 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 VMO1Q7Z5L0 202 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 ATP6V0E2Q8NHE4 81 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 RNF185Q96GF1 192 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 LINC00477Q96M19 166 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 NBASA2RRP1 2371 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 TRAV2A0A0B4J234 112 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 ZNF688P0C7X2 276 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 TEN1Q86WV5 123 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 SPTAN1Q13813 2472 aaKnown RBP6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 OVOL1O14753 267 aa6.52□□□□□ -1.37
SMARCA2-246ENST00000635739 M0R1W7 72 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 CTSGP08311 255 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 ID1P41134 155 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 ZNF256Q9Y2P7 627 aaPredicted RBP6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 PRAC2D3DTV9 90 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 ZNF56Q15929 161 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 IGFL3Q6UXB1 125 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 RAX2Q96IS3 184 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 PRO1854Q9UHT4 67 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 VCYO14598 125 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 THBDP07204 575 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 MINOS1Q5TGZ0 78 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 FANCD2OSQ96PS1 177 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 MINOS1-NBL1R4GNA1 71 aa6.51□□□□□ -1.37
SMARCA2-246ENST00000635739 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 IGHV4-39P01824 125 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 TRAV8-4A0A0B4J246 113 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 LGALS1P09382 135 aaKnown RBP6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 NDPQ00604 133 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 PAX8Q06710 450 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 PMVKQ15126 192 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 PLA2G2CQ5R387 149 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 C22orf34Q6ZV56 151 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 NPBQ8NG41 125 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 GLMPQ8WWB7 406 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 FAM110DQ8TAY7 271 aaPredicted RBP6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 IGFBPL1Q8WX77 278 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 ZMAT4Q9H898 229 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 TP53TG1Q9Y2A0 90 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 COL6A6A6NMZ7 2263 aa6.5□□□□□ -1.37
SMARCA2-246ENST00000635739 SLC25A20O43772 301 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 CFAP47Q6ZTR5 3102 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 LAMA5O15230 3695 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 TRBV7-1A0A0A6YYK4 115 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 BUB3O43684 328 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 GAS8-AS1O95177 125 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 GAGE5Q13069 117 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 GAGE6Q13070 117 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 ATXN8Q156A1 80 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 DEFB104AQ8WTQ1 72 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 CLUHP3Q96NS8 147 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 LOC400499M0QZD8 3231 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 IGKV3D-20A0A0C4DH25 116 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 PF4V1P10720 104 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 KLHL30-AS1Q8NEE0 82 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 PTH2Q96A98 100 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 MRPL53Q96EL3 112 aaKnown RBP6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 DSCAML1Q8TD84 2053 aa6.49□□□□□ -1.37
SMARCA2-246ENST00000635739 MRPS12O15235 138 aaKnown RBP6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 TMEM141Q96I45 108 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 CNFNQ9BYD5 112 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 CD7P09564 240 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 INSL3P51460 131 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 DGAT2L7PQ6IED9 249 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 Q6ZUT4 128 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 PIP4P2Q8N4L2 257 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 TOMM6Q96B49 74 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 PLEKHB2Q96CS7 222 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 ZFHX4Q86UP3 3567 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 LY6HO94772 140 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 LY6DQ14210 128 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 LENEPQ9Y5L5 61 aa6.48□□□□□ -1.37
SMARCA2-246ENST00000635739 IGHV3-64A0A075B6Q5 118 aa6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 MT-ATP8P03928 68 aa6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 C10orf126Q8N4M7 172 aa6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 RPL39LQ96EH5 51 aaKnown RBP6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 SPENQ96T58 3664 aaKnown RBP6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 ANXA2RQ3ZCQ2 193 aa6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 BAALCQ8WXS3 180 aa6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 IGHV1-69DA0A0B4J2H0 117 aa6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 B5MCH6 92 aa6.47□□□□□ -1.37
SMARCA2-246ENST00000635739 LINC01619G3V211 115 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms