RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 MRPS15P82914 257 aaKnown RBP-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 C3orf33Q6P1S2 294 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 UNQ5815/PRO19632Q6UWF5 114 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 OR5A2Q8NGI9 324 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 OR51A4Q8NGJ6 313 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 CCDC32Q9BV29 185 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 COA4Q9NYJ1 87 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 DOPEY1Q5JWR5 2465 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 UBR2Q8IWV8 1755 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 ZANQ9Y493 2812 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 EIF3AQ14152 1382 aaKnown RBP-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 UNC79Q9P2D8 2635 aa-0.35□□□□□ -2.47
SCARNA4-201ENST00000629045 MYO7AQ13402 2215 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 NINQ8N4C6 2090 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 YTHDC2Q9H6S0 1430 aaKnown RBP-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 IGHV1-24A0A0C4DH33 117 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 PPP5D1E7EU14 171 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 CKS2P33552 79 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 PPP1R1CQ8WVI7 109 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 HOPXQ9BPY8 73 aaPredicted RBP-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 BOLA2Q9H3K6 86 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 HERC2O95714 4834 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 LRP2P98164 4655 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 TCOF1Q13428 1488 aaKnown RBP-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 ABCA1O95477 2261 aa-0.36□□□□□ -2.47
SCARNA4-201ENST00000629045 RYR3Q15413 4870 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 BLMP54132 1417 aaPredicted RBP-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 FAM135BQ49AJ0 1406 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 NUP210LQ5VU65 1888 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 TRBV7-6A0A0J9YX20 115 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 PFDN1O60925 122 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 POLR2JP52435 117 aaKnown RBP-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 CRYBA4P53673 196 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 HRCT1Q6UXD1 115 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 TMEM141Q96I45 108 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 GID8Q9NWU2 228 aa-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 CDK12Q9NYV4 1490 aaPredicted RBP-0.37□□□□□ -2.47
SCARNA4-201ENST00000629045 SOGA1O94964 1423 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 HSPG2P98160 4391 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 FLNAP21333 2647 aaKnown RBP-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 TRAV12-2A0A075B6T6 113 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 TRBV10-1A0A0K0K1A3 114 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 TEX49A0A1B0GTD5 131 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 M0QZK8 103 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 IFNA21P01568 189 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 HBDP02042 147 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 APOC1P02654 83 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 PYYP10082 97 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 ADCYAP1P18509 176 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 TMEM78Q5T7P6 136 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 TRIQKQ629K1 86 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 STX12Q86Y82 276 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 OTOSQ8NHW6 89 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 BPESC1Q9GZL8 116 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 CBLN4Q9NTU7 201 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 BET1LQ9NYM9 111 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 MED31Q9Y3C7 131 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 CACNA1AO00555 2505 aa-0.38□□□□□ -2.47
SCARNA4-201ENST00000629045 PTPRQQ9UMZ3 2332 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 A0A1W2PRE2 83 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 TMEM238C9JI98 176 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 PGRMC1O00264 195 aaKnown RBP-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 OR2H2O95918 312 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 FAM107AO95990 144 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 ELOF1P60002 83 aaKnown RBP-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 EMX2Q04743 252 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 OR4S1Q8NGB4 309 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 BRK1Q8WUW1 75 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 NAT14Q8WUY8 206 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 TRAPPC2LQ9UL33 140 aa-0.39□□□□□ -2.47
SCARNA4-201ENST00000629045 USP54Q70EL1 1684 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 HERC1Q15751 4861 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 KMT2AQ03164 3969 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 TRAV17A0A0B4J275 112 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 LOC107984640A0A0U1RRK4 108 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 E7EQ34 232 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 ZNF670-ZNF695F2Z2N8 137 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 NMBP08949 121 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 THEM6Q8WUY1 208 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 VPS25Q9BRG1 176 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 ADGBQ8N7X0 1667 aa-0.4□□□□□ -2.47
SCARNA4-201ENST00000629045 KIAA1549LQ6ZVL6 1849 aa-0.41□□□□□ -2.47
SCARNA4-201ENST00000629045 APC2O95996 2303 aa-0.41□□□□□ -2.47
SCARNA4-201ENST00000629045 POLQO75417 2590 aa-0.41□□□□□ -2.47
SCARNA4-201ENST00000629045 PDZD2O15018 2839 aa-0.41□□□□□ -2.47
SCARNA4-201ENST00000629045 PTPN13Q12923 2485 aa-0.41□□□□□ -2.47
SCARNA4-201ENST00000629045 JMJD1CQ15652 2540 aa-0.41□□□□□ -2.47
SCARNA4-201ENST00000629045 FAT1Q14517 4588 aa-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 CELSR2Q9HCU4 2923 aa-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 GVQW2A0A096LPI5 108 aaPredicted RBP-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 PNMA8CA0A1B0GUJ8 204 aa-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 UQCRQO14949 82 aa-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 CFDP00746 253 aaPredicted RBP-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 RPL22P35268 128 aaKnown RBP-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 POLR2HP52434 150 aaKnown RBP-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 PCBD1P61457 104 aa-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 PPDPFLQ8WWR9 84 aa-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 ATPIF1Q9UII2 106 aa-0.41□□□□□ -2.48
SCARNA4-201ENST00000629045 ESPL1Q14674 2120 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms