RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 NPPCP23582 126 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 IZUMO4Q1ZYL8 232 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 VKORC1L1Q8N0U8 176 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 PIP4P2Q8N4L2 257 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 NSD1Q96L73 2696 aaPredicted RBP9.43□□□□□ -0.9
SRRT-216ENST00000618262 C11orf94C9JXX5 98 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 UQCRQO14949 82 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 SSSCA1O60232 199 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 ABCA11PQ4W5N1 156 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 CFAP126Q5VTH2 177 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 DYNAPQ8N1N2 210 aa9.43□□□□□ -0.9
SRRT-216ENST00000618262 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 K7ERJ3 54 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 PROP1O75360 226 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 ARL16Q0P5N6 197 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 TMEM187Q14656 261 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 FAM120AOSQ5T036 256 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 TEN1Q86WV5 123 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 LY6G5BQ8NDX9 201 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 PLXNB1O43157 2135 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 HOXB4P17483 251 aaPredicted RBP9.42□□□□□ -0.9
SRRT-216ENST00000618262 LEPP41159 167 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 LOXL1Q08397 574 aaPredicted RBP9.42□□□□□ -0.9
SRRT-216ENST00000618262 ZNF816Q0VGE8 651 aaPredicted RBP9.42□□□□□ -0.9
SRRT-216ENST00000618262 TBC1D26Q86UD7 250 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 C18orf12Q96KH6 178 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 CHEK1O14757 476 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 IGLV2-14P01704 120 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 SAA4P35542 130 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 RPL30P62888 115 aaKnown RBP9.42□□□□□ -0.9
SRRT-216ENST00000618262 KLF5Q13887 457 aaPredicted RBP9.42□□□□□ -0.9
SRRT-216ENST00000618262 DRAM1Q8N682 238 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 LINC00526Q96FQ7 95 aa9.42□□□□□ -0.9
SRRT-216ENST00000618262 LINC00473A8K010 186 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 KLF17Q5JT82 389 aaPredicted RBP9.41□□□□□ -0.9
SRRT-216ENST00000618262 HCP5Q6MZN7 132 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 MOB3BQ86TA1 216 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 ANK3Q12955 4377 aaKnown RBP9.41□□□□□ -0.9
SRRT-216ENST00000618262 TRBV6-6A0A0A6YYG2 114 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 C17orf98A8MV24 154 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 NDUFB4O95168 129 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 FXYD2P54710 66 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 GNB1P62873 340 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 ZNF645Q8N7E2 425 aa9.41□□□□□ -0.9
SRRT-216ENST00000618262 DLX4Q92988 240 aaPredicted RBP9.41□□□□□ -0.9
SRRT-216ENST00000618262 TEX50A0A1B0GTY4 177 aa9.4□□□□□ -0.9
SRRT-216ENST00000618262 H3BS24 57 aa9.4□□□□□ -0.9
SRRT-216ENST00000618262 RITA1Q96K30 269 aa9.4□□□□□ -0.9
SRRT-216ENST00000618262 MRPL20Q9BYC9 149 aaKnown RBP9.4□□□□□ -0.9
SRRT-216ENST00000618262 NHP2Q9NX24 153 aaKnown RBP9.4□□□□□ -0.9
SRRT-216ENST00000618262 A8MWL6 223 aa9.4□□□□□ -0.9
SRRT-216ENST00000618262 SPINK4O60575 86 aa9.4□□□□□ -0.9
SRRT-216ENST00000618262 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
SRRT-216ENST00000618262 LY6EQ16553 131 aa9.4□□□□□ -0.9
SRRT-216ENST00000618262 LINC01545Q5VT33 79 aa9.4□□□□□ -0.9
SRRT-216ENST00000618262 M0R2P5 195 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 LY6G6DO95868 133 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 APELAP0DMC3 54 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 ODF3L1Q8IXM7 274 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 CTXND1A0A1B0GTU2 59 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 OVOL1O14753 267 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
SRRT-216ENST00000618262 LINC00482Q8N8I6 264 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 OR9G1Q8NH87 305 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 PLEKHB2Q96CS7 222 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 TMEM147Q9BVK8 224 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 DPM2O94777 84 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 PAX8Q06710 450 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 PMAIP1Q13794 54 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 C11orf44Q8N8P7 122 aa9.39□□□□□ -0.91
SRRT-216ENST00000618262 INAFM1C9JVW0 142 aa9.38□□□□□ -0.91
SRRT-216ENST00000618262 BUB1B-PAK6H3BSN5 160 aa9.38□□□□□ -0.91
SRRT-216ENST00000618262 FSTL3O95633 263 aa9.38□□□□□ -0.91
SRRT-216ENST00000618262 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
SRRT-216ENST00000618262 RTL8BQ17RB0 113 aa9.38□□□□□ -0.91
SRRT-216ENST00000618262 OR11H6Q8NGC7 330 aa9.38□□□□□ -0.91
SRRT-216ENST00000618262 LGALS1P09382 135 aaKnown RBP9.38□□□□□ -0.91
SRRT-216ENST00000618262 SLC25A48Q6ZT89 311 aaKnown RBP9.38□□□□□ -0.91
SRRT-216ENST00000618262 RPP25LQ8N5L8 163 aaKnown RBP9.38□□□□□ -0.91
SRRT-216ENST00000618262 ATRQ13535 2644 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 H7C1H1 209 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 TIMM23O14925 209 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 KRTAP1-1Q07627 177 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 SLC25A22Q9H936 323 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 SPINK9Q5DT21 86 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 Q6ZS49 121 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 NUP35Q8NFH5 326 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
SRRT-216ENST00000618262 IGHV1-24A0A0C4DH33 117 aa9.36□□□□□ -0.91
SRRT-216ENST00000618262 RRHO14718 337 aa9.36□□□□□ -0.91
SRRT-216ENST00000618262 IGLV1-47P01700 117 aa9.36□□□□□ -0.91
SRRT-216ENST00000618262 LINC01561Q8N1V8 128 aa9.36□□□□□ -0.91
SRRT-216ENST00000618262 ANKRD29Q8N6D5 301 aa9.36□□□□□ -0.91
SRRT-216ENST00000618262 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
SRRT-216ENST00000618262 M0R1W7 72 aa9.36□□□□□ -0.91
SRRT-216ENST00000618262 TMEM258P61165 79 aa9.36□□□□□ -0.91
SRRT-216ENST00000618262 TNCP24821 2201 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 262.1 ms