RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 BUB1B-PAK6H3BSN5 160 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 ATOX1O00244 68 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 LY6HO94772 140 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 RPL36AP83881 106 aaKnown RBP6.99□□□□□ -1.29
CSMD1-216ENST00000602557 FOXI1Q12951 378 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 RPL36ALQ969Q0 106 aaKnown RBP6.99□□□□□ -1.29
CSMD1-216ENST00000602557 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 Q0VFX4 171 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 SIGLEC9Q9Y336 463 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 ANKRD39Q53RE8 183 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 CLPSP04118 112 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 MRPL55Q7Z7F7 128 aaKnown RBP6.99□□□□□ -1.29
CSMD1-216ENST00000602557 RBX1P62877 108 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 LINC00477Q96M19 166 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 TP73-AS1Q9UF72 201 aa6.99□□□□□ -1.29
CSMD1-216ENST00000602557 TEN1Q86WV5 123 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 IGKV1D-17A0A075B6S4 117 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 C2orf66Q6UXQ4 117 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 PRSS46E5RG02 174 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 J3QQQ9 107 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 MPLKIPQ8TAP9 179 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 SPANXCQ9NY87 97 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 A0A0G2JNJ9 132 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 PSCAO43653 123 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 RPL32P62910 135 aaKnown RBP6.98□□□□□ -1.29
CSMD1-216ENST00000602557 Q9UFV3 132 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 USP9XQ93008 2570 aaPredicted RBP6.98□□□□□ -1.29
CSMD1-216ENST00000602557 DEFB130BP0DP73 79 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 DEFB130AP0DP74 79 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 PFN2P35080 140 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 WFDC9Q8NEX5 89 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 MSRB2Q9Y3D2 182 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 C6orf226Q5I0X4 101 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 DSCR8Q96T75 97 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 ZNF462Q96JM2 2506 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 DKK1O94907 266 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 SPATA25Q9BR10 227 aa6.98□□□□□ -1.29
CSMD1-216ENST00000602557 MINOS1Q5TGZ0 78 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 C9orf139Q6ZV77 190 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 MINOS1-NBL1R4GNA1 71 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 PTPRBP23467 1997 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 EGR2P11161 476 aaPredicted RBP6.97□□□□□ -1.29
CSMD1-216ENST00000602557 ZNF493Q6ZR52 646 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 F8P00451 2351 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 USMG5Q96IX5 58 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 CFC1BP0CG36 223 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 CFC1P0CG37 223 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 CRYGBP07316 175 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 RNASE2P10153 161 aaKnown RBP6.97□□□□□ -1.29
CSMD1-216ENST00000602557 TMEM141Q96I45 108 aa6.97□□□□□ -1.29
CSMD1-216ENST00000602557 SHANK2-AS3Q9BTD1 123 aa6.96□□□□□ -1.29
CSMD1-216ENST00000602557 ZNRD1Q9P1U0 126 aa6.96□□□□□ -1.29
CSMD1-216ENST00000602557 THSD7BQ9C0I4 1608 aa6.96□□□□□ -1.29
CSMD1-216ENST00000602557 FAM223BA6NKX1 122 aa6.96□□□□□ -1.29
CSMD1-216ENST00000602557 F8VRH5 84 aa6.96□□□□□ -1.29
CSMD1-216ENST00000602557 FAM223AQ8IWN6 122 aa6.96□□□□□ -1.29
CSMD1-216ENST00000602557 CFHR3Q02985 330 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 C16orf54Q6UWD8 224 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 NTN3O00634 580 aaPredicted RBP6.96□□□□□ -1.3
CSMD1-216ENST00000602557 PAX9P55771 341 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 DSCR9P59020 149 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 TMEM75Q8N9X5 138 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 SAA4P35542 130 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 LYPD2Q6UXB3 125 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 DAZ1Q9NQZ3 744 aaKnown RBP6.96□□□□□ -1.3
CSMD1-216ENST00000602557 TRBV6-6A0A0A6YYG2 114 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 IGHV3-16A0A0C4DH30 117 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 B4DSR2 109 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 RHPN1-AS1Q9BWJ2 59 aa6.96□□□□□ -1.3
CSMD1-216ENST00000602557 A0A0B4J2C4 111 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 C20orf78Q9BR46 151 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 TTTY13Q9BZ97 58 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 CD59P13987 128 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 ZNF747Q9BV97 191 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 TRBV25-1A0A075B6N4 114 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 ATG2AQ2TAZ0 1938 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 LTAP01374 205 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 PSMB8P28062 276 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 SS18Q15532 418 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 COA6Q5JTJ3 125 aaKnown RBP6.95□□□□□ -1.3
CSMD1-216ENST00000602557 LYPD6Q86Y78 171 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 KLK9Q9UKQ9 250 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 ICOSQ9Y6W8 199 aa6.95□□□□□ -1.3
CSMD1-216ENST00000602557 OOSP1A8MZH6 123 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 LYPD1Q8N2G4 141 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 RNF5Q99942 180 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 OVOL3O00110 214 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 NXPH4O95158 308 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 DEFB121Q5J5C9 76 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 PDE6HQ13956 83 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 CSRP1P21291 193 aaKnown RBP6.94□□□□□ -1.3
CSMD1-216ENST00000602557 CMC4P56277 68 aaPredicted RBP6.94□□□□□ -1.3
CSMD1-216ENST00000602557 VOPP1Q96AW1 172 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 TMEM14BQ9NUH8 114 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 PLA2G2EQ9NZK7 142 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 ACANP16112 2415 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 COL8A2P25067 703 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 CEP295Q9C0D2 2601 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 CCDC179H3BU77 68 aa6.94□□□□□ -1.3
CSMD1-216ENST00000602557 CLEC2BQ92478 149 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms