RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 YPEL4Q96NS1 127 aa16.57■□□□□ 0.24
IRF3-228ENST00000601291 C20orf144Q9BQM9 153 aa16.57■□□□□ 0.24
IRF3-228ENST00000601291 C1QTNF4Q9BXJ3 329 aa16.56■□□□□ 0.24
IRF3-228ENST00000601291 TGIF2-C20orf24A0A0A6YYL0 155 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 CXCL1P09341 107 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 ANXA2RQ3ZCQ2 193 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 SAMD5Q5TGI4 173 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 GTSF1Q8WW33 167 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 XCL2Q9UBD3 114 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 TRRAPQ9Y4A5 3859 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 TRBV24-1A0A075B6N3 115 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 G3V4G9 280 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 KRTAP10-11P60412 298 aa16.55■□□□□ 0.24
IRF3-228ENST00000601291 GRIFINA4D1Z8 144 aa16.54■□□□□ 0.24
IRF3-228ENST00000601291 COLCA2A8K830 154 aa16.54■□□□□ 0.24
IRF3-228ENST00000601291 FOXA3P55318 350 aaPredicted RBP16.54■□□□□ 0.24
IRF3-228ENST00000601291 NUP35Q8NFH5 326 aa16.54■□□□□ 0.24
IRF3-228ENST00000601291 IGHV1OR15-1A0A075B7D0 117 aa16.53■□□□□ 0.24
IRF3-228ENST00000601291 TDRG1Q3Y452 100 aa16.53■□□□□ 0.24
IRF3-228ENST00000601291 FER1L6-AS1Q8NA97 138 aa16.53■□□□□ 0.24
IRF3-228ENST00000601291 PYGO2Q9BRQ0 406 aa16.53■□□□□ 0.24
IRF3-228ENST00000601291 TPPP3Q9BW30 176 aa16.53■□□□□ 0.24
IRF3-228ENST00000601291 NOTCH3Q9UM47 2321 aa16.52■□□□□ 0.24
IRF3-228ENST00000601291 RBMY1A1P0DJD3 496 aaKnown RBP16.52■□□□□ 0.24
IRF3-228ENST00000601291 RBMY1CP0DJD4 496 aa16.52■□□□□ 0.24
IRF3-228ENST00000601291 ASIPP42127 132 aa16.52■□□□□ 0.24
IRF3-228ENST00000601291 RBMY1FQ15415 496 aaKnown RBP16.52■□□□□ 0.24
IRF3-228ENST00000601291 KRTAP21-3Q3LHN1 58 aa16.52■□□□□ 0.24
IRF3-228ENST00000601291 FAM210BQ96KR6 192 aa16.52■□□□□ 0.24
IRF3-228ENST00000601291 PGLYRP4Q96LB8 373 aa16.52■□□□□ 0.24
IRF3-228ENST00000601291 ANK2Q01484 3957 aa16.52■□□□□ 0.23
IRF3-228ENST00000601291 LOC102724200A0A096LPH7 203 aaPredicted RBP16.51■□□□□ 0.23
IRF3-228ENST00000601291 TMEM256Q8N2U0 113 aa16.51■□□□□ 0.23
IRF3-228ENST00000601291 BORCS7Q96B45 105 aa16.51■□□□□ 0.23
IRF3-228ENST00000601291 IGLC6P0CF74 106 aa16.51■□□□□ 0.23
IRF3-228ENST00000601291 S100A4P26447 101 aaKnown RBP16.51■□□□□ 0.23
IRF3-228ENST00000601291 TMEM208Q9BTX3 173 aa16.51■□□□□ 0.23
IRF3-228ENST00000601291 CSTL1Q9H114 145 aa16.51■□□□□ 0.23
IRF3-228ENST00000601291 SPINK4O60575 86 aa16.5■□□□□ 0.23
IRF3-228ENST00000601291 TYMSP04818 313 aa16.5■□□□□ 0.23
IRF3-228ENST00000601291 ZNF575Q86XF7 245 aa16.5■□□□□ 0.23
IRF3-228ENST00000601291 LINC01587Q99440 93 aa16.5■□□□□ 0.23
IRF3-228ENST00000601291 CTRLP40313 264 aa16.49■□□□□ 0.23
IRF3-228ENST00000601291 LYZL1Q6UWQ5 148 aa16.49■□□□□ 0.23
IRF3-228ENST00000601291 TRGV11A0A075B6L2 103 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 F2Z2F3 143 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 GNRH2O43555 120 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 GIG44P09565 113 aaPredicted RBP16.48■□□□□ 0.23
IRF3-228ENST00000601291 IGHV4-30-4P0DP06 118 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 RAB5AP20339 215 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 APOC4P55056 127 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 DNLZQ5SXM8 178 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 MRPL54Q6P161 138 aaKnown RBP16.48■□□□□ 0.23
IRF3-228ENST00000601291 ATP5L2Q7Z4Y8 100 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 LINC00467Q9BRT7 94 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 GOLT1BQ9Y3E0 138 aa16.48■□□□□ 0.23
IRF3-228ENST00000601291 KIR2DL5BA0A0G2JN68 375 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 KIR2DL5BA0A0G2JPC4 375 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 A0A1B0GUT8 65 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 CBY3A6NI87 242 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 KIR2DL5AQ8N109 375 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 KIR2DL5BQ8NHK3 375 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 H3BVH4 76 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 MED14OSP0DP75 135 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 C1orf158Q8N1D5 194 aa16.47■□□□□ 0.23
IRF3-228ENST00000601291 OR5AL1P0C617 328 aa16.46■□□□□ 0.23
IRF3-228ENST00000601291 ARMS2P0C7Q2 107 aa16.46■□□□□ 0.23
IRF3-228ENST00000601291 HTN1P15515 57 aa16.46■□□□□ 0.23
IRF3-228ENST00000601291 RIGQ13278 110 aa16.46■□□□□ 0.23
IRF3-228ENST00000601291 TP53TG3Q9ULZ0 132 aa16.46■□□□□ 0.23
IRF3-228ENST00000601291 IGHV3OR16-12A0A075B7B8 117 aa16.45■□□□□ 0.22
IRF3-228ENST00000601291 SNAI2O43623 268 aa16.45■□□□□ 0.22
IRF3-228ENST00000601291 COX19Q49B96 90 aa16.45■□□□□ 0.22
IRF3-228ENST00000601291 RASL11AQ6T310 242 aa16.45■□□□□ 0.22
IRF3-228ENST00000601291 SSBP4Q9BWG4 385 aaPredicted RBP16.45■□□□□ 0.22
IRF3-228ENST00000601291 TIMM8BQ9Y5J9 83 aaPredicted RBP16.45■□□□□ 0.22
IRF3-228ENST00000601291 RPS10P46783 165 aaKnown RBP16.44■□□□□ 0.22
IRF3-228ENST00000601291 HBBP68871 147 aa16.44■□□□□ 0.22
IRF3-228ENST00000601291 IGHV3-16A0A0C4DH30 117 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 A0A1B0GW15 77 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 CSNK1G2-AS1Q8NCQ2 148 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 A8MZ25 164 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 S100A8P05109 93 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 RNASE3P12724 160 aaKnown RBP16.43■□□□□ 0.22
IRF3-228ENST00000601291 CACNG7P62955 275 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 WDR73Q6P4I2 378 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 CNFNQ9BYD5 112 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 PHLDA3Q9Y5J5 127 aa16.43■□□□□ 0.22
IRF3-228ENST00000601291 A0A1B0GXF2 115 aa16.42■□□□□ 0.22
IRF3-228ENST00000601291 CAMPP49913 170 aa16.42■□□□□ 0.22
IRF3-228ENST00000601291 MUC21A0A0G2JKD1 596 aa16.41■□□□□ 0.22
IRF3-228ENST00000601291 MUC21A0A140T8X8 626 aa16.41■□□□□ 0.22
IRF3-228ENST00000601291 RAB4BP61018 213 aa16.41■□□□□ 0.22
IRF3-228ENST00000601291 ZNF415Q09FC8 603 aa16.41■□□□□ 0.22
IRF3-228ENST00000601291 SPANXN1Q5VSR9 72 aa16.41■□□□□ 0.22
IRF3-228ENST00000601291 OR10AG1Q8NH19 301 aa16.41■□□□□ 0.22
IRF3-228ENST00000601291 SCRT2Q9NQ03 307 aa16.41■□□□□ 0.22
IRF3-228ENST00000601291 MDFICQ9P1T7 246 aa16.41■□□□□ 0.22
IRF3-228ENST00000601291 UBE2CO00762 179 aa16.4■□□□□ 0.22
IRF3-228ENST00000601291 SSTP61278 116 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms