RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 C16orf54Q6UWD8 224 aa9.09□□□□□ -0.95
IRF3-218ENST00000597369 GBGT1Q8N5D6 347 aa9.09□□□□□ -0.95
IRF3-218ENST00000597369 CLEC5AQ9NY25 188 aa9.09□□□□□ -0.95
IRF3-218ENST00000597369 KLF12Q9Y4X4 402 aa9.09□□□□□ -0.95
IRF3-218ENST00000597369 IGHV3OR16-13A0A075B7E8 117 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 IGHV3-49A0A0A0MS15 119 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 IGHV3-74A0A0B4J1X5 117 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 TRAV2A0A0B4J234 112 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 TEX48A0A1B0GUV7 120 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 SERTM2A0A1B0GWG4 89 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 TMEM189A5PLL7 270 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 PGPEP1LA6NFU8 196 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 ISLRO14498 428 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 APOHP02749 345 aaPredicted RBP9.08□□□□□ -0.96
IRF3-218ENST00000597369 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 BAGE2Q86Y30 109 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 ARL6IP6Q8N6S5 226 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 SMIM12Q96EX1 92 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 SFRP2Q96HF1 295 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 LINC00479Q96M42 142 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 SLC50A1Q9BRV3 221 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 LRP2P98164 4655 aa9.08□□□□□ -0.96
IRF3-218ENST00000597369 TRAV34A0A0B4J273 112 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 TRBV6-1A0A0K0K1D8 114 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 COLCA2A8K830 154 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 K7EN84 100 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 S100PP25815 95 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 GOLT1AQ6ZVE7 132 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 OR10G8Q8NGN5 311 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 GLMPQ8WWB7 406 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 NEU1Q99519 415 aa9.07□□□□□ -0.96
IRF3-218ENST00000597369 ZNF331Q9NQX6 463 aaPredicted RBP9.07□□□□□ -0.96
IRF3-218ENST00000597369 TMA7Q9Y2S6 64 aaKnown RBP9.07□□□□□ -0.96
IRF3-218ENST00000597369 DIRC3C9JPN6 131 aa9.06□□□□□ -0.96
IRF3-218ENST00000597369 GCGP01275 180 aa9.06□□□□□ -0.96
IRF3-218ENST00000597369 IGLV2-8P01709 118 aa9.06□□□□□ -0.96
IRF3-218ENST00000597369 MGST1P10620 155 aaKnown RBP9.06□□□□□ -0.96
IRF3-218ENST00000597369 KRTAP10-1P60331 282 aa9.06□□□□□ -0.96
IRF3-218ENST00000597369 MS4A6AQ9H2W1 248 aa9.06□□□□□ -0.96
IRF3-218ENST00000597369 BIN3Q9NQY0 253 aa9.06□□□□□ -0.96
IRF3-218ENST00000597369 DKK2Q9UBU2 259 aa9.06□□□□□ -0.96
IRF3-218ENST00000597369 FBLL1A6NHQ2 334 aaKnown RBP9.05□□□□□ -0.96
IRF3-218ENST00000597369 LTAP01374 205 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 ERVFC1-1P60608 527 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 TTC32Q5I0X7 151 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 KCNIP4Q6PIL6 250 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 Q86TA4 180 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 FAM24BQ8N5W8 94 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 IMMP2LQ96T52 175 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 KRTAP1-5Q9BYS1 174 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 OSTCQ9NRP0 149 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 URGCP-MRPS24S4R325 110 aa9.05□□□□□ -0.96
IRF3-218ENST00000597369 SMIM9A6NGZ8 99 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 M0R3E3 92 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 CCL18P55774 89 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 FLI1Q01543 452 aaPredicted RBP9.04□□□□□ -0.96
IRF3-218ENST00000597369 ELOBQ15370 118 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 PSG3Q16557 428 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 SAMD13Q5VXD3 122 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 TCF24Q7RTU0 167 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 PRNTQ86SH4 94 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 NHLRC2Q8NBF2 726 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 DEFB104AQ8WTQ1 72 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 MRPL53Q96EL3 112 aaKnown RBP9.04□□□□□ -0.96
IRF3-218ENST00000597369 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 SGK494Q96LW2 274 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 C1QTNF4Q9BXJ3 329 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 Q9H8V8 135 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 LINC00588Q9Y4M8 146 aa9.04□□□□□ -0.96
IRF3-218ENST00000597369 A0A1W2PPQ1 181 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 IGLV2-11P01706 119 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 HTN3P15516 51 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 RAB5AP20339 215 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 OR5I1Q13606 314 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 ZNF705AQ6ZN79 300 aaPredicted RBP9.03□□□□□ -0.96
IRF3-218ENST00000597369 FAM231DQ6ZW35 169 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 TMEM183AQ8IXX5 376 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 PSG8Q9UQ74 426 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 ZFP30Q9Y2G7 519 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 DNAH8Q96JB1 4490 aa9.03□□□□□ -0.96
IRF3-218ENST00000597369 TRAV8-1A0A0A6YYK1 113 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 TGIF2-C20orf24A0A0A6YYL0 155 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 TRAV8-2A0A0B4J237 113 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 PFN1P07737 140 aaKnown RBP9.02□□□□□ -0.97
IRF3-218ENST00000597369 EMP1P54849 157 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 RPL11P62913 178 aaKnown RBP9.02□□□□□ -0.97
IRF3-218ENST00000597369 IBA57Q5T440 356 aaKnown RBP9.02□□□□□ -0.97
IRF3-218ENST00000597369 FAM222AQ5U5X8 452 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 BTF3L4Q96K17 158 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 MLST8Q9BVC4 326 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 NRN1Q9NPD7 142 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 IL36BQ9NZH7 164 aa9.02□□□□□ -0.97
IRF3-218ENST00000597369 PKHD1L1Q86WI1 4243 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 TRBV24-1A0A075B6N3 115 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 IGKV2-40A0A087WW87 121 aaPredicted RBP9.01□□□□□ -0.97
IRF3-218ENST00000597369 RBAKDNA6NC62 111 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 ZNF705FA8MVS1 300 aaPredicted RBP9.01□□□□□ -0.97
IRF3-218ENST00000597369 EREGO14944 169 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms