RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CXCL1P09341 107 aa16.38■□□□□ 0.21
ATG4D-209ENST00000588857 DEFB125Q8N687 156 aa16.38■□□□□ 0.21
ATG4D-209ENST00000588857 IGKV3D-20A0A0C4DH25 116 aa16.37■□□□□ 0.21
ATG4D-209ENST00000588857 AMBPP02760 352 aa16.37■□□□□ 0.21
ATG4D-209ENST00000588857 GTSF1Q8WW33 167 aa16.37■□□□□ 0.21
ATG4D-209ENST00000588857 FAM210BQ96KR6 192 aa16.37■□□□□ 0.21
ATG4D-209ENST00000588857 ZNF324O75467 553 aaPredicted RBP16.36■□□□□ 0.21
ATG4D-209ENST00000588857 MUC21Q5SSG8 566 aa16.36■□□□□ 0.21
ATG4D-209ENST00000588857 NUP35Q8NFH5 326 aa16.36■□□□□ 0.21
ATG4D-209ENST00000588857 PYGO2Q9BRQ0 406 aa16.36■□□□□ 0.21
ATG4D-209ENST00000588857 FAM159AQ6UWV7 190 aa16.35■□□□□ 0.21
ATG4D-209ENST00000588857 PGLYRP4Q96LB8 373 aa16.35■□□□□ 0.21
ATG4D-209ENST00000588857 ZMAT5Q9UDW3 170 aaKnown RBP16.35■□□□□ 0.21
ATG4D-209ENST00000588857 GRIFINA4D1Z8 144 aa16.34■□□□□ 0.21
ATG4D-209ENST00000588857 CRXO43186 299 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-209ENST00000588857 RPL35AP18077 110 aaKnown RBP16.34■□□□□ 0.21
ATG4D-209ENST00000588857 RAB5AP20339 215 aa16.34■□□□□ 0.21
ATG4D-209ENST00000588857 ANXA2RQ3ZCQ2 193 aa16.34■□□□□ 0.21
ATG4D-209ENST00000588857 TPPP3Q9BW30 176 aa16.34■□□□□ 0.21
ATG4D-209ENST00000588857 SPINK4O60575 86 aa16.34■□□□□ 0.21
ATG4D-209ENST00000588857 INSP01308 110 aa16.34■□□□□ 0.21
ATG4D-209ENST00000588857 FOXA3P55318 350 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-209ENST00000588857 KCNS1Q96KK3 526 aa16.34■□□□□ 0.21
ATG4D-209ENST00000588857 XCL2Q9UBD3 114 aa16.33■□□□□ 0.2
ATG4D-209ENST00000588857 MORN3Q6PF18 240 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-209ENST00000588857 ZNF575Q86XF7 245 aa16.32■□□□□ 0.2
ATG4D-209ENST00000588857 Q8N1Y9 231 aa16.32■□□□□ 0.2
ATG4D-209ENST00000588857 FER1L6-AS1Q8NA97 138 aa16.32■□□□□ 0.2
ATG4D-209ENST00000588857 SRD5A3Q9H8P0 318 aa16.32■□□□□ 0.2
ATG4D-209ENST00000588857 BORCS7Q96B45 105 aa16.31■□□□□ 0.2
ATG4D-209ENST00000588857 C20orf144Q9BQM9 153 aa16.31■□□□□ 0.2
ATG4D-209ENST00000588857 MEGF8Q7Z7M0 2845 aa16.31■□□□□ 0.2
ATG4D-209ENST00000588857 TYMSP04818 313 aa16.3■□□□□ 0.2
ATG4D-209ENST00000588857 RPS10P46783 165 aaKnown RBP16.3■□□□□ 0.2
ATG4D-209ENST00000588857 EGFEM1PQ0D2K5 195 aa16.3■□□□□ 0.2
ATG4D-209ENST00000588857 MRPL54Q6P161 138 aaKnown RBP16.3■□□□□ 0.2
ATG4D-209ENST00000588857 IGHV1OR15-1A0A075B7D0 117 aa16.3■□□□□ 0.2
ATG4D-209ENST00000588857 IGLC6P0CF74 106 aa16.3■□□□□ 0.2
ATG4D-209ENST00000588857 ASIPP42127 132 aa16.3■□□□□ 0.2
ATG4D-209ENST00000588857 TDRG1Q3Y452 100 aa16.3■□□□□ 0.2
ATG4D-209ENST00000588857 LYZL1Q6UWQ5 148 aa16.3■□□□□ 0.2
ATG4D-209ENST00000588857 C1QTNF4Q9BXJ3 329 aa16.3■□□□□ 0.2
ATG4D-209ENST00000588857 RBMY1A1P0DJD3 496 aaKnown RBP16.29■□□□□ 0.2
ATG4D-209ENST00000588857 RBMY1CP0DJD4 496 aa16.29■□□□□ 0.2
ATG4D-209ENST00000588857 S100A4P26447 101 aaKnown RBP16.29■□□□□ 0.2
ATG4D-209ENST00000588857 RBMY1FQ15415 496 aaKnown RBP16.29■□□□□ 0.2
ATG4D-209ENST00000588857 ATP5L2Q7Z4Y8 100 aa16.29■□□□□ 0.2
ATG4D-209ENST00000588857 A0A1B0GUT8 65 aa16.28■□□□□ 0.2
ATG4D-209ENST00000588857 F2Z2F3 143 aa16.28■□□□□ 0.2
ATG4D-209ENST00000588857 GNRH2O43555 120 aa16.28■□□□□ 0.2
ATG4D-209ENST00000588857 KRTAP10-11P60412 298 aa16.28■□□□□ 0.2
ATG4D-209ENST00000588857 DEFA6Q01524 100 aa16.28■□□□□ 0.2
ATG4D-209ENST00000588857 CTRLP40313 264 aa16.27■□□□□ 0.2
ATG4D-209ENST00000588857 LINC01587Q99440 93 aa16.27■□□□□ 0.2
ATG4D-209ENST00000588857 TMEM208Q9BTX3 173 aa16.27■□□□□ 0.2
ATG4D-209ENST00000588857 G3V4G9 280 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 RIGQ13278 110 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 TMEM256Q8N2U0 113 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 NOTCH1P46531 2555 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 CBY3A6NI87 242 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 H3BVH4 76 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 ARMS2P0C7Q2 107 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 HBBP68871 147 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 COX19Q49B96 90 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 DNLZQ5SXM8 178 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 RASL11AQ6T310 242 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 CSTL1Q9H114 145 aa16.26■□□□□ 0.19
ATG4D-209ENST00000588857 TIMM8BQ9Y5J9 83 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-209ENST00000588857 LOC102724200A0A096LPH7 203 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-209ENST00000588857 GIG44P09565 113 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-209ENST00000588857 OR5AL1P0C617 328 aa16.25■□□□□ 0.19
ATG4D-209ENST00000588857 HTN1P15515 57 aa16.25■□□□□ 0.19
ATG4D-209ENST00000588857 CAMPP49913 170 aa16.25■□□□□ 0.19
ATG4D-209ENST00000588857 RAB4BP61018 213 aa16.25■□□□□ 0.19
ATG4D-209ENST00000588857 WDR73Q6P4I2 378 aa16.25■□□□□ 0.19
ATG4D-209ENST00000588857 TP53TG3Q9ULZ0 132 aa16.25■□□□□ 0.19
ATG4D-209ENST00000588857 TRGV11A0A075B6L2 103 aa16.24■□□□□ 0.19
ATG4D-209ENST00000588857 MUC21A0A0G2JKD1 596 aa16.24■□□□□ 0.19
ATG4D-209ENST00000588857 MUC21A0A140T8X8 626 aa16.24■□□□□ 0.19
ATG4D-209ENST00000588857 FRMD6-AS1P0C7T7 363 aa16.24■□□□□ 0.19
ATG4D-209ENST00000588857 MED14OSP0DP75 135 aa16.24■□□□□ 0.19
ATG4D-209ENST00000588857 SSTP61278 116 aa16.24■□□□□ 0.19
ATG4D-209ENST00000588857 SAMD5Q5TGI4 173 aa16.24■□□□□ 0.19
ATG4D-209ENST00000588857 SSBP4Q9BWG4 385 aaPredicted RBP16.24■□□□□ 0.19
ATG4D-209ENST00000588857 GOLT1BQ9Y3E0 138 aa16.24■□□□□ 0.19
ATG4D-209ENST00000588857 A0A1B0GW15 77 aa16.23■□□□□ 0.19
ATG4D-209ENST00000588857 A0A1B0GXF2 115 aa16.23■□□□□ 0.19
ATG4D-209ENST00000588857 S100A8P05109 93 aa16.23■□□□□ 0.19
ATG4D-209ENST00000588857 GNB1LQ9BYB4 327 aa16.23■□□□□ 0.19
ATG4D-209ENST00000588857 IGHV3OR16-12A0A075B7B8 117 aa16.22■□□□□ 0.19
ATG4D-209ENST00000588857 SNAI2O43623 268 aa16.22■□□□□ 0.19
ATG4D-209ENST00000588857 C1orf158Q8N1D5 194 aa16.22■□□□□ 0.19
ATG4D-209ENST00000588857 LINC00467Q9BRT7 94 aa16.22■□□□□ 0.19
ATG4D-209ENST00000588857 CNFNQ9BYD5 112 aa16.22■□□□□ 0.19
ATG4D-209ENST00000588857 IGHV3-16A0A0C4DH30 117 aa16.21■□□□□ 0.19
ATG4D-209ENST00000588857 SNURFLB1AK76 121 aa16.21■□□□□ 0.19
ATG4D-209ENST00000588857 TWIST1Q15672 202 aa16.21■□□□□ 0.19
ATG4D-209ENST00000588857 PHLDA3Q9Y5J5 127 aa16.21■□□□□ 0.19
ATG4D-209ENST00000588857 TRAPPC1Q9Y5R8 145 aa16.21■□□□□ 0.19
ATG4D-209ENST00000588857 MT-ND6P03923 174 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms