RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 LEPROTL1O95214 131 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 IGHV3-23P01764 117 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 IGHG4P01861 327 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 ARMS2P0C7Q2 107 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 ARL3P36405 182 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 ZNF138P52744 262 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 PSMG4Q5JS54 123 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 TMEM78Q5T7P6 136 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 FAM104BQ5XKR9 115 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 LYZL1Q6UWQ5 148 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 PET117Q6UWS5 81 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 ZNF705AQ6ZN79 300 aaPredicted RBP4.39□□□□□ -1.71
SDF2-206ENST00000587788 C9orf47Q6ZRZ4 202 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 FA2HQ7L5A8 372 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 ORMDL3Q8N138 153 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 FAM19A2Q8N3H0 131 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 FER1L6-AS1Q8NA97 138 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 OR10AG1Q8NH19 301 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 ZNF418Q8TF45 676 aaPredicted RBP4.39□□□□□ -1.71
SDF2-206ENST00000587788 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 CNFNQ9BYD5 112 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 NPFFR1Q9GZQ6 430 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 TMEM191AQ9H0A3 160 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 VPREB3Q9UKI3 123 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 PAM16Q9Y3D7 125 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 PLXNB1O43157 2135 aa4.39□□□□□ -1.71
SDF2-206ENST00000587788 IGKV2-40A0A087WW87 121 aaPredicted RBP4.38□□□□□ -1.71
SDF2-206ENST00000587788 IGHV1-24A0A0C4DH33 117 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 TRBV7-9A0A0J9YWB2 115 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 C2orf70A6NJV1 201 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 HSBP1L1C9JCN9 74 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 OVOL1O14753 267 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 IGKV2D-40P01614 121 aaPredicted RBP4.38□□□□□ -1.71
SDF2-206ENST00000587788 IGHV4-59P01825 116 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 ORM1P02763 201 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 IGLC6P0CF74 106 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 BLCAPP62952 87 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 LY6EQ16553 131 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 SPATA45Q537H7 98 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 SMIM15Q7Z3B0 74 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 SPATA12Q7Z6I5 190 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 TMEM219Q86XT9 240 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.38□□□□□ -1.71
SDF2-206ENST00000587788 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 LINC00477Q96M19 166 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 C8orf49Q96NF6 230 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 VGLL1Q99990 258 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 ST20Q9HBF5 79 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 MRPS16Q9Y3D3 137 aaKnown RBP4.38□□□□□ -1.71
SDF2-206ENST00000587788 DNHD1Q96M86 4753 aa4.38□□□□□ -1.71
SDF2-206ENST00000587788 JMJD1CQ15652 2540 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 LINC01548A6NM66 108 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 SYS1-DBNDD2H3BUS1 97 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 K7EMT4 169 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 TCF21O43680 179 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 IGLC3P0DOY3 106 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 PPIFP30405 207 aaKnown RBP4.37□□□□□ -1.71
SDF2-206ENST00000587788 HILS1P60008 231 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 CACNG7P62955 275 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 TWIST1Q15672 202 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 EBLN2Q6P2I7 272 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 Q8N2B8 174 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 OR10J6PQ8NGY7 276 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 GLMPQ8WWB7 406 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 URB1-AS1Q96HZ7 61 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 PRELID3AQ96N28 172 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 DUX5Q96PT3 197 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 TPPP3Q9BW30 176 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 MS4A6AQ9H2W1 248 aa4.37□□□□□ -1.71
SDF2-206ENST00000587788 IGHV4-4A0A075B6R2 117 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 TRAV8-2A0A0B4J237 113 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 IGHV3-35A0A0C4DH35 117 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 LINC01546A6NGU7 62 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 DNAJC9-AS1A6NH13 148 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 ELANEP08246 267 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 CKS2P33552 79 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 HNRNPA3P51991 378 aaKnown RBP4.36□□□□□ -1.71
SDF2-206ENST00000587788 NUTF2P61970 127 aaKnown RBP4.36□□□□□ -1.71
SDF2-206ENST00000587788 FOXE3Q13461 319 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 TDRG1Q3Y452 100 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 FAM106AQ4KMX7 169 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 COL5A1-AS1Q5SY13 56 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 LINC00469Q8N7U9 141 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 DPF1Q92782 380 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 PMCHL2Q9BQD1 86 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 SNHG12Q9BXW3 62 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 AGPAT4-IT1Q9H0P7 198 aa4.36□□□□□ -1.71
SDF2-206ENST00000587788 NXT2Q9NPJ8 142 aaKnown RBP4.36□□□□□ -1.71
SDF2-206ENST00000587788 TMSB15BA0A087X1C1 80 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 IGHV7-4-1A0A0J9YVY3 117 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 A0A1B0GV90 55 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 OR4C46A6NHA9 309 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 PRAC2D3DTV9 90 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 D6R8Y8 96 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 ID1P41134 155 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 ZNF80P51504 273 aaPredicted RBP4.35□□□□□ -1.71
SDF2-206ENST00000587788 CFHR3Q02985 330 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 ERCC8Q13216 396 aa4.35□□□□□ -1.71
SDF2-206ENST00000587788 MRPL51Q4U2R6 128 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms