RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 NDFIP1Q9BT67 221 aa14.05□□□□□ -0.16
SS18-218ENST00000581021 TRGV2A0A075B6R0 118 aa14.04□□□□□ -0.16
SS18-218ENST00000581021 IGHV3-16A0A0C4DH30 117 aa14.04□□□□□ -0.16
SS18-218ENST00000581021 GCGP01275 180 aa14.04□□□□□ -0.16
SS18-218ENST00000581021 TYMSP04818 313 aa14.04□□□□□ -0.16
SS18-218ENST00000581021 EIF5AP63241 154 aaKnown RBP14.04□□□□□ -0.16
SS18-218ENST00000581021 DPPA3Q6W0C5 159 aa14.04□□□□□ -0.16
SS18-218ENST00000581021 ARL2-SNX15V9GYD0 113 aa14.04□□□□□ -0.16
SS18-218ENST00000581021 TRGV11A0A075B6L2 103 aa14.03□□□□□ -0.16
SS18-218ENST00000581021 A0A0J9YY99 117 aa14.03□□□□□ -0.16
SS18-218ENST00000581021 PAGE4O60829 102 aa14.03□□□□□ -0.16
SS18-218ENST00000581021 NUDT3O95989 172 aa14.03□□□□□ -0.16
SS18-218ENST00000581021 LGALS9BQ3B8N2 356 aa14.03□□□□□ -0.16
SS18-218ENST00000581021 C9orf62Q8N4C0 152 aa14.03□□□□□ -0.16
SS18-218ENST00000581021 NKX6-2Q9C056 277 aaPredicted RBP14.03□□□□□ -0.16
SS18-218ENST00000581021 MUC4Q99102 2169 aa14.03□□□□□ -0.16
SS18-218ENST00000581021 NACAE9PAV3 2078 aa14.02□□□□□ -0.16
SS18-218ENST00000581021 IGHV3-53P01767 116 aa14.02□□□□□ -0.17
SS18-218ENST00000581021 CST9LP1Q5W188 147 aa14.02□□□□□ -0.17
SS18-218ENST00000581021 HIST1H2BAQ96A08 127 aa14.02□□□□□ -0.17
SS18-218ENST00000581021 VSIG2Q96IQ7 327 aa14.02□□□□□ -0.17
SS18-218ENST00000581021 FBLL1A6NHQ2 334 aaKnown RBP14.01□□□□□ -0.17
SS18-218ENST00000581021 PFN1P07737 140 aaKnown RBP14.01□□□□□ -0.17
SS18-218ENST00000581021 H2AFB1P0C5Y9 115 aa14.01□□□□□ -0.17
SS18-218ENST00000581021 CCL20P78556 96 aa14.01□□□□□ -0.17
SS18-218ENST00000581021 SMUG1Q53HV7 270 aa14.01□□□□□ -0.17
SS18-218ENST00000581021 SAPCD1Q5SSQ6 148 aa14□□□□□ -0.17
SS18-218ENST00000581021 BIRC6Q9NR09 4857 aa13.99□□□□□ -0.17
SS18-218ENST00000581021 CRIP1P50238 77 aa13.99□□□□□ -0.17
SS18-218ENST00000581021 RNF212Q495C1 297 aa13.99□□□□□ -0.17
SS18-218ENST00000581021 UBE2DNLQ8IWF7 75 aa13.99□□□□□ -0.17
SS18-218ENST00000581021 RASL10AQ92737 203 aa13.99□□□□□ -0.17
SS18-218ENST00000581021 ZC2HC1AQ96GY0 325 aa13.99□□□□□ -0.17
SS18-218ENST00000581021 SDF2L1Q9HCN8 221 aa13.99□□□□□ -0.17
SS18-218ENST00000581021 FAT2Q9NYQ8 4349 aa13.99□□□□□ -0.17
SS18-218ENST00000581021 PPT1P50897 306 aa13.98□□□□□ -0.17
SS18-218ENST00000581021 ZFP69Q49AA0 526 aa13.98□□□□□ -0.17
SS18-218ENST00000581021 SLC51BQ86UW2 128 aa13.98□□□□□ -0.17
SS18-218ENST00000581021 SPXQ9BT56 116 aa13.98□□□□□ -0.17
SS18-218ENST00000581021 IGLV2-18A0A075B6J9 118 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 IGKV3D-20A0A0C4DH25 116 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 SCO2A0A1W2PP80 73 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 SFTA3P0C7M3 94 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 SULT1A2P50226 295 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 FHL2Q14192 279 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 COX8CQ7Z4L0 72 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 ZNF479Q96JC4 524 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 KCNS1Q96KK3 526 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 TCEAL7Q9BRU2 100 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 LINC00588Q9Y4M8 146 aa13.97□□□□□ -0.17
SS18-218ENST00000581021 DNAH17Q9UFH2 4485 aa13.96□□□□□ -0.17
SS18-218ENST00000581021 TRAV1-1A0A0B4J248 108 aa13.96□□□□□ -0.17
SS18-218ENST00000581021 TRBV6-1A0A0K0K1D8 114 aa13.96□□□□□ -0.17
SS18-218ENST00000581021 M0R2N4 97 aa13.96□□□□□ -0.17
SS18-218ENST00000581021 LTAP01374 205 aa13.96□□□□□ -0.17
SS18-218ENST00000581021 FMC1Q96HJ9 113 aa13.96□□□□□ -0.17
SS18-218ENST00000581021 C9orf85Q96MD7 179 aa13.96□□□□□ -0.17
SS18-218ENST00000581021 H3BNG1 76 aa13.95□□□□□ -0.18
SS18-218ENST00000581021 M0R2P5 195 aa13.95□□□□□ -0.18
SS18-218ENST00000581021 RNASE3P12724 160 aaKnown RBP13.95□□□□□ -0.18
SS18-218ENST00000581021 AKR1C3P42330 323 aa13.95□□□□□ -0.18
SS18-218ENST00000581021 RAB5CP51148 216 aa13.95□□□□□ -0.18
SS18-218ENST00000581021 A0A096LPF7 62 aa13.94□□□□□ -0.18
SS18-218ENST00000581021 NKX2-5P52952 324 aaPredicted RBP13.94□□□□□ -0.18
SS18-218ENST00000581021 EIF5AL1Q6IS14 154 aaKnown RBP13.94□□□□□ -0.18
SS18-218ENST00000581021 Q6ZR54 194 aa13.94□□□□□ -0.18
SS18-218ENST00000581021 ZNF575Q86XF7 245 aa13.94□□□□□ -0.18
SS18-218ENST00000581021 NHLRC2Q8NBF2 726 aa13.94□□□□□ -0.18
SS18-218ENST00000581021 ZNRF2Q8NHG8 242 aa13.94□□□□□ -0.18
SS18-218ENST00000581021 GNG13Q9P2W3 67 aa13.94□□□□□ -0.18
SS18-218ENST00000581021 HECTD4Q9Y4D8 3996 aa13.94□□□□□ -0.18
SS18-218ENST00000581021 SH2D1AO60880 128 aa13.93□□□□□ -0.18
SS18-218ENST00000581021 CRYBA4P53673 196 aa13.93□□□□□ -0.18
SS18-218ENST00000581021 UBE2G1P62253 170 aa13.93□□□□□ -0.18
SS18-218ENST00000581021 ZFP30Q9Y2G7 519 aa13.93□□□□□ -0.18
SS18-218ENST00000581021 ESRGQ1W209 222 aa13.92□□□□□ -0.18
SS18-218ENST00000581021 TRAV4A0A0B4J268 109 aa13.91□□□□□ -0.18
SS18-218ENST00000581021 FABP5P3A8MUU1 101 aa13.91□□□□□ -0.18
SS18-218ENST00000581021 PAX4O43316 350 aa13.91□□□□□ -0.18
SS18-218ENST00000581021 PRO0255Q9UI72 69 aa13.91□□□□□ -0.18
SS18-218ENST00000581021 HHLA3Q9XRX5 114 aa13.91□□□□□ -0.18
SS18-218ENST00000581021 KRBOX1C9JBD0 128 aa13.9□□□□□ -0.18
SS18-218ENST00000581021 C9JCJ5 164 aa13.9□□□□□ -0.18
SS18-218ENST00000581021 M0R036 132 aa13.9□□□□□ -0.18
SS18-218ENST00000581021 CCL18P55774 89 aa13.9□□□□□ -0.18
SS18-218ENST00000581021 FAM3BP58499 235 aaPredicted RBP13.9□□□□□ -0.18
SS18-218ENST00000581021 ZNF674Q2M3X9 581 aa13.9□□□□□ -0.18
SS18-218ENST00000581021 DERL1Q9BUN8 251 aa13.9□□□□□ -0.18
SS18-218ENST00000581021 MANBALQ9NQG1 85 aa13.9□□□□□ -0.18
SS18-218ENST00000581021 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
SS18-218ENST00000581021 PGPEP1LA6NFU8 196 aa13.89□□□□□ -0.19
SS18-218ENST00000581021 ZNF876PQ49A33 203 aa13.89□□□□□ -0.19
SS18-218ENST00000581021 ZNF506Q5JVG8 444 aa13.89□□□□□ -0.19
SS18-218ENST00000581021 FAM162BQ5T6X4 162 aa13.89□□□□□ -0.19
SS18-218ENST00000581021 C11orf52Q96A22 123 aa13.89□□□□□ -0.19
SS18-218ENST00000581021 MLST8Q9BVC4 326 aa13.89□□□□□ -0.19
SS18-218ENST00000581021 TRGV4A0A0C4DH28 118 aa13.88□□□□□ -0.19
SS18-218ENST00000581021 B4DEV8 164 aa13.88□□□□□ -0.19
SS18-218ENST00000581021 RTL8CO15255 209 aa13.88□□□□□ -0.19
SS18-218ENST00000581021 ORM1P02763 201 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms