RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 TCTE3Q8IZS6 198 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 SFT2D1Q8WV19 159 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 C8orf49Q96NF6 230 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 MDFICQ9P1T7 246 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
GGA3-204ENST00000578208 PFN1P07737 140 aaKnown RBP8.13□□□□□ -1.11
GGA3-204ENST00000578208 FHITP49789 147 aa8.13□□□□□ -1.11
GGA3-204ENST00000578208 UBE2G1P62253 170 aa8.13□□□□□ -1.11
GGA3-204ENST00000578208 SLAQ13239 276 aa8.13□□□□□ -1.11
GGA3-204ENST00000578208 TCEAL7Q9BRU2 100 aa8.13□□□□□ -1.11
GGA3-204ENST00000578208 VPS13DQ5THJ4 4388 aa8.13□□□□□ -1.11
GGA3-204ENST00000578208 IGLV2-18A0A075B6J9 118 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 TRAV34A0A0B4J273 112 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 TRGV4A0A0C4DH28 118 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 M0R2N4 97 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 IGLV2-11P01706 119 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 TYMSP04818 313 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 H2AFB1P0C5Y9 115 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 AKR1C3P42330 323 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 Q6ZNX1 250 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 Q86TA4 180 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 AKAP14Q86UN6 197 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 FMC1Q96HJ9 113 aa8.12□□□□□ -1.11
GGA3-204ENST00000578208 hCG_2014768A0A024R1R8 64 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 IGHV3-16A0A0C4DH30 117 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 A0A1B0GV50 99 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 TEX46H3BTG2 121 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 M0R2P5 195 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 PAX4O43316 350 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 GNRH2O43555 120 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 C1QBP02746 253 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 ZNF80P51504 273 aaPredicted RBP8.11□□□□□ -1.11
GGA3-204ENST00000578208 LGALSLQ3ZCW2 172 aaPredicted RBP8.11□□□□□ -1.11
GGA3-204ENST00000578208 MBD3L1Q8WWY6 194 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 LINC00479Q96M42 142 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 PRO0255Q9UI72 69 aa8.11□□□□□ -1.11
GGA3-204ENST00000578208 TRAV4A0A0B4J268 109 aa8.1□□□□□ -1.11
GGA3-204ENST00000578208 PAGE4O60829 102 aa8.1□□□□□ -1.11
GGA3-204ENST00000578208 RAB5CP51148 216 aa8.1□□□□□ -1.11
GGA3-204ENST00000578208 SOHLH1Q5JUK2 328 aa8.1□□□□□ -1.11
GGA3-204ENST00000578208 PCNPQ8WW12 178 aaKnown RBP8.1□□□□□ -1.11
GGA3-204ENST00000578208 RASL10AQ92737 203 aa8.1□□□□□ -1.11
GGA3-204ENST00000578208 ZFP30Q9Y2G7 519 aa8.1□□□□□ -1.11
GGA3-204ENST00000578208 ICOSQ9Y6W8 199 aa8.1□□□□□ -1.11
GGA3-204ENST00000578208 FABP5P3A8MUU1 101 aa8.09□□□□□ -1.11
GGA3-204ENST00000578208 S100A4P26447 101 aaKnown RBP8.09□□□□□ -1.11
GGA3-204ENST00000578208 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.11
GGA3-204ENST00000578208 OR4C5Q8NGB2 326 aa8.09□□□□□ -1.11
GGA3-204ENST00000578208 VSIG2Q96IQ7 327 aa8.09□□□□□ -1.11
GGA3-204ENST00000578208 HHLA3Q9XRX5 114 aa8.09□□□□□ -1.11
GGA3-204ENST00000578208 LINC00588Q9Y4M8 146 aa8.09□□□□□ -1.11
GGA3-204ENST00000578208 KMT2AQ03164 3969 aa8.09□□□□□ -1.11
GGA3-204ENST00000578208 DNAH6Q9C0G6 4158 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 C9JCJ5 164 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 S100A9P06702 114 aaKnown RBP8.08□□□□□ -1.12
GGA3-204ENST00000578208 SFTA3P0C7M3 94 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 ASIPP42127 132 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 CRYBA4P53673 196 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 FHL2Q14192 279 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 SLC51BQ86UW2 128 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 ZNF479Q96JC4 524 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 C11orf21Q9P2W6 132 aa8.08□□□□□ -1.12
GGA3-204ENST00000578208 A0A096LPF7 62 aa8.07□□□□□ -1.12
GGA3-204ENST00000578208 TRBV6-1A0A0K0K1D8 114 aa8.07□□□□□ -1.12
GGA3-204ENST00000578208 ORM1P02763 201 aa8.07□□□□□ -1.12
GGA3-204ENST00000578208 MRPL23Q16540 153 aaKnown RBP8.07□□□□□ -1.12
GGA3-204ENST00000578208 ZNF876PQ49A33 203 aa8.07□□□□□ -1.12
GGA3-204ENST00000578208 FAM162BQ5T6X4 162 aa8.07□□□□□ -1.12
GGA3-204ENST00000578208 ZNRF2Q8NHG8 242 aa8.07□□□□□ -1.12
GGA3-204ENST00000578208 ZC2HC1AQ96GY0 325 aa8.07□□□□□ -1.12
GGA3-204ENST00000578208 MRPS16Q9Y3D3 137 aaKnown RBP8.07□□□□□ -1.12
GGA3-204ENST00000578208 NBDYA0A0U1RRE5 68 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 SCO2A0A1W2PP80 73 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 B4DEV8 164 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 CIDEAO60543 219 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 LTAP01374 205 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 SRIP30626 198 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 SULT1A2P50226 295 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 ESRGQ1W209 222 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 TTC32Q5I0X7 151 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 C1orf134Q5TEV5 83 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 Q6ZR54 194 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 C9orf85Q96MD7 179 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 UPK3BQ9BT76 320 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 Q9H8V8 135 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 GNG13Q9P2W3 67 aa8.06□□□□□ -1.12
GGA3-204ENST00000578208 TRAV1-1A0A0B4J248 108 aa8.05□□□□□ -1.12
GGA3-204ENST00000578208 M0R036 132 aa8.05□□□□□ -1.12
GGA3-204ENST00000578208 SH2D1AO60880 128 aa8.05□□□□□ -1.12
GGA3-204ENST00000578208 IFNA1P01562 189 aa8.05□□□□□ -1.12
GGA3-204ENST00000578208 NEGR1Q7Z3B1 354 aa8.05□□□□□ -1.12
GGA3-204ENST00000578208 COX8CQ7Z4L0 72 aa8.05□□□□□ -1.12
GGA3-204ENST00000578208 TXNDC17Q9BRA2 123 aa8.05□□□□□ -1.12
GGA3-204ENST00000578208 EPPK1P58107 5090 aaKnown RBP8.05□□□□□ -1.12
GGA3-204ENST00000578208 NACAE9PAV3 2078 aa8.04□□□□□ -1.12
GGA3-204ENST00000578208 IGKV3D-20A0A0C4DH25 116 aa8.04□□□□□ -1.12
GGA3-204ENST00000578208 PRSS29PA6NIE9 313 aa8.04□□□□□ -1.12
GGA3-204ENST00000578208 RNASE3P12724 160 aaKnown RBP8.04□□□□□ -1.12
GGA3-204ENST00000578208 GYPEP15421 78 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms