RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TRAV26-1A0A087WT03 109 aa10.3□□□□□ -0.76
PCDHGB3-201ENST00000576222 TEN1Q86WV5 123 aa10.3□□□□□ -0.76
PCDHGB3-201ENST00000576222 CTSZQ9UBR2 303 aa10.3□□□□□ -0.76
PCDHGB3-201ENST00000576222 IGKV1D-37A0A075B6S9 117 aa10.29□□□□□ -0.76
PCDHGB3-201ENST00000576222 C15orf53Q8NAA6 179 aa10.29□□□□□ -0.76
PCDHGB3-201ENST00000576222 CFC1BP0CG36 223 aa10.29□□□□□ -0.76
PCDHGB3-201ENST00000576222 CFC1P0CG37 223 aa10.29□□□□□ -0.76
PCDHGB3-201ENST00000576222 G3V318 75 aa10.29□□□□□ -0.76
PCDHGB3-201ENST00000576222 FAM223BA6NKX1 122 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 FAM223AQ8IWN6 122 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 C2orf16Q68DN1 1984 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 LGALS1P09382 135 aaKnown RBP10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 RASL10AQ92737 203 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 SPAG8Q99932 426 aaPredicted RBP10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 CRPP02741 224 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 ZNF493Q6ZR52 646 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 TRBV6-1A0A0K0K1D8 114 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 FOXE3Q13461 319 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 Q8N976 141 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 USMG5Q96IX5 58 aa10.28□□□□□ -0.76
PCDHGB3-201ENST00000576222 LINC00158P58513 81 aa10.27□□□□□ -0.76
PCDHGB3-201ENST00000576222 DAZAP2Q15038 168 aaPredicted RBP10.27□□□□□ -0.76
PCDHGB3-201ENST00000576222 GAGE2AQ6NT46 116 aa10.27□□□□□ -0.76
PCDHGB3-201ENST00000576222 SAA4P35542 130 aa10.27□□□□□ -0.77
PCDHGB3-201ENST00000576222 FAM215AQ9Y5M1 114 aa10.27□□□□□ -0.77
PCDHGB3-201ENST00000576222 IGLV2-23P01705 113 aa10.27□□□□□ -0.77
PCDHGB3-201ENST00000576222 CRYGCP07315 174 aa10.27□□□□□ -0.77
PCDHGB3-201ENST00000576222 KLHL30-AS1Q8NEE0 82 aa10.27□□□□□ -0.77
PCDHGB3-201ENST00000576222 CRYBA4P53673 196 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 NDUFA12Q9UI09 145 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 GOLGB1Q14789 3259 aaKnown RBP10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 OVOL3O00110 214 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 PRIMA1Q86XR5 153 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 ZNF625Q96I27 306 aaPredicted RBP10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 DSCAML1Q8TD84 2053 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 CGB3P0DN86 165 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 CGB7P0DN87 165 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 UTF1Q5T230 341 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 Q8N7P7 452 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 RBAKDNA6NC62 111 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 ADARB2-AS1A8MUL3 147 aa10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 DAZ1Q9NQZ3 744 aaKnown RBP10.26□□□□□ -0.77
PCDHGB3-201ENST00000576222 TRGV2A0A075B6R0 118 aa10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 HIST1H4AP62805 103 aaKnown RBP10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 CARD19Q96LW7 228 aa10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 HCFC1P51610 2035 aa10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 SPRY2O43597 315 aa10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 GATD1Q8NB37 220 aa10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 PRSS33Q8NF86 280 aa10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 I3L3M4 83 aa10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 C1orf229Q6ZS94 237 aaPredicted RBP10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 EML5Q05BV3 1969 aa10.25□□□□□ -0.77
PCDHGB3-201ENST00000576222 NCKAP5O14513 1909 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 ANKRD29Q8N6D5 301 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 C1orf159Q96HA4 380 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 CCL19Q99731 98 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 BRD3OSQ6XYD6 125 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 NUP210LQ5VU65 1888 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 LEPROTO15243 131 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 PHLDA1Q8WV24 401 aaPredicted RBP10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 RPL39LQ96EH5 51 aaKnown RBP10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 INAFM2P0DMQ5 153 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 MSMPQ1L6U9 139 aa10.24□□□□□ -0.77
PCDHGB3-201ENST00000576222 TRAV13-1A0A0B4J241 112 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 TRAV12-1A0A0B4J245 112 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 IGHV1-69DA0A0B4J2H0 117 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 H3BUX3 64 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 SMIM20Q8N5G0 67 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 TEX22C9J3V5 150 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 PAX4O43316 350 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 C2orf91Q6ZV80 131 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 PTH2Q96A98 100 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 LENEPQ9Y5L5 61 aa10.23□□□□□ -0.77
PCDHGB3-201ENST00000576222 E9PLD3 99 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 ZNF415Q09FC8 603 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 SP5Q6BEB4 398 aaPredicted RBP10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 GNRH2O43555 120 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 UBE2E1P51965 193 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 TMEM86BQ8N661 226 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 PEMTQ9UBM1 199 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 A4D1N5 150 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 RPL36AP83881 106 aaKnown RBP10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 ATP6V0E2Q8NHE4 81 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 RPL36ALQ969Q0 106 aaKnown RBP10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 MRPL53Q96EL3 112 aaKnown RBP10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 SPANXB1Q9NS25 103 aaPredicted RBP10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 IGLV11-55A0A075B6I3 123 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 WI2-2373I1.2A0A1W2PRP0 233 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 KNCNA6PVL3 124 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 OVOL2Q9BRP0 275 aa10.22□□□□□ -0.77
PCDHGB3-201ENST00000576222 DKK4Q9UBT3 224 aa10.21□□□□□ -0.77
PCDHGB3-201ENST00000576222 CTSGP08311 255 aa10.21□□□□□ -0.77
PCDHGB3-201ENST00000576222 SPANXDQ9BXN6 97 aa10.21□□□□□ -0.77
PCDHGB3-201ENST00000576222 PRAC2D3DTV9 90 aa10.21□□□□□ -0.78
PCDHGB3-201ENST00000576222 SPINK13Q1W4C9 94 aa10.21□□□□□ -0.78
PCDHGB3-201ENST00000576222 TM2D2Q9BX73 214 aa10.21□□□□□ -0.78
PCDHGB3-201ENST00000576222 WDR87Q6ZQQ6 2873 aa10.21□□□□□ -0.78
PCDHGB3-201ENST00000576222 STHQ8IWL8 128 aa10.2□□□□□ -0.78
PCDHGB3-201ENST00000576222 KLK9Q9UKQ9 250 aa10.2□□□□□ -0.78
PCDHGB3-201ENST00000576222 NDUFA4O00483 81 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms