RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 KCNS1Q96KK3 526 aa13.12□□□□□ -0.31
CMTM3-210ENST00000565666 LINC00479Q96M42 142 aa13.12□□□□□ -0.31
CMTM3-210ENST00000565666 SDF2L1Q9HCN8 221 aa13.12□□□□□ -0.31
CMTM3-210ENST00000565666 TRAV26-1A0A087WT03 109 aa13.11□□□□□ -0.31
CMTM3-210ENST00000565666 A0A0J9YY99 117 aa13.11□□□□□ -0.31
CMTM3-210ENST00000565666 H2AFB1P0C5Y9 115 aa13.11□□□□□ -0.31
CMTM3-210ENST00000565666 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
CMTM3-210ENST00000565666 C18orf15Q96N68 181 aa13.11□□□□□ -0.31
CMTM3-210ENST00000565666 SPXQ9BT56 116 aa13.11□□□□□ -0.31
CMTM3-210ENST00000565666 GNRH2O43555 120 aa13.1□□□□□ -0.31
CMTM3-210ENST00000565666 PAGE4O60829 102 aa13.1□□□□□ -0.31
CMTM3-210ENST00000565666 TYMSP04818 313 aa13.1□□□□□ -0.31
CMTM3-210ENST00000565666 ZNF80P51504 273 aaPredicted RBP13.1□□□□□ -0.31
CMTM3-210ENST00000565666 UBE2G1P62253 170 aa13.1□□□□□ -0.31
CMTM3-210ENST00000565666 RNF212Q495C1 297 aa13.1□□□□□ -0.31
CMTM3-210ENST00000565666 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
CMTM3-210ENST00000565666 IGHV3-53P01767 116 aa13.09□□□□□ -0.31
CMTM3-210ENST00000565666 PFN1P07737 140 aaKnown RBP13.09□□□□□ -0.31
CMTM3-210ENST00000565666 Q86TA4 180 aa13.09□□□□□ -0.31
CMTM3-210ENST00000565666 IGHV3-16A0A0C4DH30 117 aa13.08□□□□□ -0.32
CMTM3-210ENST00000565666 FMC1Q96HJ9 113 aa13.08□□□□□ -0.32
CMTM3-210ENST00000565666 TCEAL7Q9BRU2 100 aa13.08□□□□□ -0.32
CMTM3-210ENST00000565666 HYDINQ4G0P3 5121 aa13.08□□□□□ -0.32
CMTM3-210ENST00000565666 AKR1C3P42330 323 aa13.07□□□□□ -0.32
CMTM3-210ENST00000565666 RAB5CP51148 216 aa13.07□□□□□ -0.32
CMTM3-210ENST00000565666 H3BNG1 76 aa13.06□□□□□ -0.32
CMTM3-210ENST00000565666 CCL18P55774 89 aa13.06□□□□□ -0.32
CMTM3-210ENST00000565666 SLC51BQ86UW2 128 aa13.06□□□□□ -0.32
CMTM3-210ENST00000565666 C11orf21Q9P2W6 132 aa13.06□□□□□ -0.32
CMTM3-210ENST00000565666 IGLV2-18A0A075B6J9 118 aa13.05□□□□□ -0.32
CMTM3-210ENST00000565666 M0R2N4 97 aa13.05□□□□□ -0.32
CMTM3-210ENST00000565666 M0R2P5 195 aa13.05□□□□□ -0.32
CMTM3-210ENST00000565666 RASL10AQ92737 203 aa13.05□□□□□ -0.32
CMTM3-210ENST00000565666 ZFP30Q9Y2G7 519 aa13.05□□□□□ -0.32
CMTM3-210ENST00000565666 TRGV4A0A0C4DH28 118 aa13.04□□□□□ -0.32
CMTM3-210ENST00000565666 FABP5P3A8MUU1 101 aa13.04□□□□□ -0.32
CMTM3-210ENST00000565666 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
CMTM3-210ENST00000565666 SULT1A2P50226 295 aa13.04□□□□□ -0.32
CMTM3-210ENST00000565666 FAM3BP58499 235 aaPredicted RBP13.04□□□□□ -0.32
CMTM3-210ENST00000565666 PAX4O43316 350 aa13.03□□□□□ -0.32
CMTM3-210ENST00000565666 SFTA3P0C7M3 94 aa13.03□□□□□ -0.32
CMTM3-210ENST00000565666 SLAQ13239 276 aa13.03□□□□□ -0.32
CMTM3-210ENST00000565666 C9orf62Q8N4C0 152 aa13.03□□□□□ -0.32
CMTM3-210ENST00000565666 VSIG2Q96IQ7 327 aa13.03□□□□□ -0.32
CMTM3-210ENST00000565666 MANBALQ9NQG1 85 aa13.03□□□□□ -0.32
CMTM3-210ENST00000565666 PRO0255Q9UI72 69 aa13.03□□□□□ -0.32
CMTM3-210ENST00000565666 NACAE9PAV3 2078 aa13.02□□□□□ -0.33
CMTM3-210ENST00000565666 SCO2A0A1W2PP80 73 aa13.02□□□□□ -0.33
CMTM3-210ENST00000565666 ZC2HC1AQ96GY0 325 aa13.02□□□□□ -0.33
CMTM3-210ENST00000565666 ZNF479Q96JC4 524 aa13.02□□□□□ -0.33
CMTM3-210ENST00000565666 GNG13Q9P2W3 67 aa13.02□□□□□ -0.33
CMTM3-210ENST00000565666 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 TRAV4A0A0B4J268 109 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 TRBV6-1A0A0K0K1D8 114 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 C9JCJ5 164 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 LTAP01374 205 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 S100A9P06702 114 aaKnown RBP13.01□□□□□ -0.33
CMTM3-210ENST00000565666 S100A4P26447 101 aaKnown RBP13.01□□□□□ -0.33
CMTM3-210ENST00000565666 FHL2Q14192 279 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 OR4C5Q8NGB2 326 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 HHLA3Q9XRX5 114 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 LINC00588Q9Y4M8 146 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 VPS13DQ5THJ4 4388 aa13.01□□□□□ -0.33
CMTM3-210ENST00000565666 MUC4Q99102 2169 aa13□□□□□ -0.33
CMTM3-210ENST00000565666 A0A096LPF7 62 aa13□□□□□ -0.33
CMTM3-210ENST00000565666 A0A1B0GVG6 124 aa13□□□□□ -0.33
CMTM3-210ENST00000565666 ORM1P02763 201 aa13□□□□□ -0.33
CMTM3-210ENST00000565666 CRYBA4P53673 196 aa13□□□□□ -0.33
CMTM3-210ENST00000565666 CCL20P78556 96 aa13□□□□□ -0.33
CMTM3-210ENST00000565666 ICOSQ9Y6W8 199 aa13□□□□□ -0.33
CMTM3-210ENST00000565666 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 B4DEV8 164 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 SH2D1AO60880 128 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 ASIPP42127 132 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 FAM162BQ5T6X4 162 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 COX8CQ7Z4L0 72 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 NHLRC2Q8NBF2 726 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 C9orf85Q96MD7 179 aa12.99□□□□□ -0.33
CMTM3-210ENST00000565666 M0R036 132 aa12.98□□□□□ -0.33
CMTM3-210ENST00000565666 CRIP1P50238 77 aa12.98□□□□□ -0.33
CMTM3-210ENST00000565666 IFNA1P01562 189 aa12.97□□□□□ -0.33
CMTM3-210ENST00000565666 RNASE3P12724 160 aaKnown RBP12.97□□□□□ -0.33
CMTM3-210ENST00000565666 ESRGQ1W209 222 aa12.97□□□□□ -0.33
CMTM3-210ENST00000565666 ZNRF2Q8NHG8 242 aa12.97□□□□□ -0.33
CMTM3-210ENST00000565666 PCNPQ8WW12 178 aaKnown RBP12.97□□□□□ -0.33
CMTM3-210ENST00000565666 MRPL23Q16540 153 aaKnown RBP12.96□□□□□ -0.33
CMTM3-210ENST00000565666 ZNF674Q2M3X9 581 aa12.96□□□□□ -0.33
CMTM3-210ENST00000565666 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
CMTM3-210ENST00000565666 TXNDC17Q9BRA2 123 aa12.96□□□□□ -0.33
CMTM3-210ENST00000565666 PGPEP1LA6NFU8 196 aa12.95□□□□□ -0.34
CMTM3-210ENST00000565666 KRBOX1C9JBD0 128 aa12.95□□□□□ -0.34
CMTM3-210ENST00000565666 ZNF506Q5JVG8 444 aa12.95□□□□□ -0.34
CMTM3-210ENST00000565666 Q6ZR54 194 aa12.95□□□□□ -0.34
CMTM3-210ENST00000565666 TMSB15BA0A087X1C1 80 aa12.94□□□□□ -0.34
CMTM3-210ENST00000565666 GRIFINA4D1Z8 144 aa12.94□□□□□ -0.34
CMTM3-210ENST00000565666 H3BVH4 76 aa12.94□□□□□ -0.34
CMTM3-210ENST00000565666 NKX2-5P52952 324 aaPredicted RBP12.94□□□□□ -0.34
CMTM3-210ENST00000565666 ALKAL2Q6UX46 152 aa12.94□□□□□ -0.34
CMTM3-210ENST00000565666 PTH2Q96A98 100 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms