RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 KLHL30-AS1Q8NEE0 82 aa15.79■□□□□ 0.12
MAP1LC3B-206ENST00000564844 HLA-DRB4X5D2U9 266 aa15.79■□□□□ 0.12
MAP1LC3B-206ENST00000564844 ATP5LO75964 103 aa15.79■□□□□ 0.12
MAP1LC3B-206ENST00000564844 MRPL16Q9NX20 251 aaKnown RBP15.79■□□□□ 0.12
MAP1LC3B-206ENST00000564844 ATP6V0BQ99437 205 aa15.79■□□□□ 0.12
MAP1LC3B-206ENST00000564844 PSMB2P49721 201 aa15.78■□□□□ 0.12
MAP1LC3B-206ENST00000564844 LY6LH3BQJ8 138 aa15.78■□□□□ 0.12
MAP1LC3B-206ENST00000564844 SCGB1D4Q6XE38 83 aa15.78■□□□□ 0.12
MAP1LC3B-206ENST00000564844 ZFP2Q6ZN57 461 aa15.78■□□□□ 0.12
MAP1LC3B-206ENST00000564844 ZNF502Q8TBZ5 544 aa15.78■□□□□ 0.12
MAP1LC3B-206ENST00000564844 IGLV2-18A0A075B6J9 118 aa15.77■□□□□ 0.12
MAP1LC3B-206ENST00000564844 TRAV26-1A0A087WT03 109 aa15.77■□□□□ 0.12
MAP1LC3B-206ENST00000564844 A0A1B0GV72 72 aa15.77■□□□□ 0.12
MAP1LC3B-206ENST00000564844 OR11H12B2RN74 326 aa15.77■□□□□ 0.12
MAP1LC3B-206ENST00000564844 OR11H1Q8NG94 326 aa15.77■□□□□ 0.12
MAP1LC3B-206ENST00000564844 OR11H2Q8NH07 326 aa15.77■□□□□ 0.12
MAP1LC3B-206ENST00000564844 LINC00527Q9UJ94 153 aa15.77■□□□□ 0.12
MAP1LC3B-206ENST00000564844 CRYBA4P53673 196 aa15.77■□□□□ 0.11
MAP1LC3B-206ENST00000564844 RRN3P1Q2M238 152 aa15.77■□□□□ 0.11
MAP1LC3B-206ENST00000564844 C15orf32Q32M92 178 aa15.77■□□□□ 0.11
MAP1LC3B-206ENST00000564844 SYT8Q8NBV8 401 aa15.77■□□□□ 0.11
MAP1LC3B-206ENST00000564844 RPL39LQ96EH5 51 aaKnown RBP15.77■□□□□ 0.11
MAP1LC3B-206ENST00000564844 CLEC19AQ6UXS0 136 aa15.76■□□□□ 0.11
MAP1LC3B-206ENST00000564844 VPS13CQ709C8 3753 aa15.76■□□□□ 0.11
MAP1LC3B-206ENST00000564844 LINC01549A6NIU2 74 aa15.76■□□□□ 0.11
MAP1LC3B-206ENST00000564844 SRSF9Q13242 221 aaKnown RBP eCLIP15.76■□□□□ 0.11
MAP1LC3B-206ENST00000564844 SCGB3A1Q96QR1 104 aa15.76■□□□□ 0.11
MAP1LC3B-206ENST00000564844 A0A087WX48 190 aa15.76■□□□□ 0.11
MAP1LC3B-206ENST00000564844 NRACQ8N912 160 aa15.75■□□□□ 0.11
MAP1LC3B-206ENST00000564844 MGPP08493 103 aa15.75■□□□□ 0.11
MAP1LC3B-206ENST00000564844 ZNF672Q499Z4 452 aaPredicted RBP15.75■□□□□ 0.11
MAP1LC3B-206ENST00000564844 HOXA3O43365 443 aaPredicted RBP15.74■□□□□ 0.11
MAP1LC3B-206ENST00000564844 PIP4P1Q86T03 277 aa15.74■□□□□ 0.11
MAP1LC3B-206ENST00000564844 PLEKHB2Q96CS7 222 aa15.74■□□□□ 0.11
MAP1LC3B-206ENST00000564844 G3V318 75 aa15.74■□□□□ 0.11
MAP1LC3B-206ENST00000564844 C14orf178Q8N769 122 aaPredicted RBP15.74■□□□□ 0.11
MAP1LC3B-206ENST00000564844 CD3EP07766 207 aa15.74■□□□□ 0.11
MAP1LC3B-206ENST00000564844 TMEM78Q5T7P6 136 aa15.73■□□□□ 0.11
MAP1LC3B-206ENST00000564844 RAXQ9Y2V3 346 aa15.73■□□□□ 0.11
MAP1LC3B-206ENST00000564844 SRSF1Q07955 248 aaKnown RBP eCLIP15.73■□□□□ 0.11
MAP1LC3B-206ENST00000564844 MORN3Q6PF18 240 aaPredicted RBP15.72■□□□□ 0.11
MAP1LC3B-206ENST00000564844 ZNF815PA8K554 130 aa15.72■□□□□ 0.11
MAP1LC3B-206ENST00000564844 SLC25A16P16260 332 aa15.72■□□□□ 0.11
MAP1LC3B-206ENST00000564844 IGHV3OR16-10A0A075B7F0 116 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 MYMXA0A1B0GTQ4 84 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 SMPXQ9UHP9 88 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 PRO0461Q9UI25 63 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 TRBV7-3A0A075B6L6 115 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 PRSS29PA6NIE9 313 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 LINC01559Q495D7 138 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 PRR9Q5T870 116 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 NFE4Q86UQ8 179 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 PRADC1Q9BSG0 188 aa15.71■□□□□ 0.11
MAP1LC3B-206ENST00000564844 IGHV7-4-1A0A0J9YVY3 117 aa15.71■□□□□ 0.1
MAP1LC3B-206ENST00000564844 PIFOQ8TCI5 191 aa15.71■□□□□ 0.1
MAP1LC3B-206ENST00000564844 MT-ATP8P03928 68 aa15.7■□□□□ 0.1
MAP1LC3B-206ENST00000564844 HIVEP3Q5T1R4 2406 aa15.7■□□□□ 0.1
MAP1LC3B-206ENST00000564844 CRYBG3Q68DQ2 2970 aa15.7■□□□□ 0.1
MAP1LC3B-206ENST00000564844 BUB3O43684 328 aa15.7■□□□□ 0.1
MAP1LC3B-206ENST00000564844 LGALS1P09382 135 aaKnown RBP15.7■□□□□ 0.1
MAP1LC3B-206ENST00000564844 S100A4P26447 101 aaKnown RBP15.7■□□□□ 0.1
MAP1LC3B-206ENST00000564844 IGFL3Q6UXB1 125 aa15.7■□□□□ 0.1
MAP1LC3B-206ENST00000564844 CNFNQ9BYD5 112 aa15.7■□□□□ 0.1
MAP1LC3B-206ENST00000564844 F8VRH5 84 aa15.69■□□□□ 0.1
MAP1LC3B-206ENST00000564844 H7C1H1 209 aa15.69■□□□□ 0.1
MAP1LC3B-206ENST00000564844 ARL3P36405 182 aa15.69■□□□□ 0.1
MAP1LC3B-206ENST00000564844 SMCPP49901 116 aaPredicted RBP15.69■□□□□ 0.1
MAP1LC3B-206ENST00000564844 MSRB2Q9Y3D2 182 aa15.69■□□□□ 0.1
MAP1LC3B-206ENST00000564844 B9A039 149 aa15.69■□□□□ 0.1
MAP1LC3B-206ENST00000564844 SPATA25Q9BR10 227 aa15.69■□□□□ 0.1
MAP1LC3B-206ENST00000564844 H7C2G1 150 aa15.68■□□□□ 0.1
MAP1LC3B-206ENST00000564844 SPINK8P0C7L1 97 aa15.68■□□□□ 0.1
MAP1LC3B-206ENST00000564844 FHL3Q13643 280 aa15.68■□□□□ 0.1
MAP1LC3B-206ENST00000564844 RNF5Q99942 180 aa15.68■□□□□ 0.1
MAP1LC3B-206ENST00000564844 IGHV7-81A0A0B4J1V7 117 aa15.68■□□□□ 0.1
MAP1LC3B-206ENST00000564844 PSMG3-AS1Q96PY0 264 aa15.68■□□□□ 0.1
MAP1LC3B-206ENST00000564844 RPL11P62913 178 aaKnown RBP15.67■□□□□ 0.1
MAP1LC3B-206ENST00000564844 GEMIN7Q9H840 131 aaKnown RBP15.67■□□□□ 0.1
MAP1LC3B-206ENST00000564844 USP9YO00507 2555 aaPredicted RBP15.67■□□□□ 0.1
MAP1LC3B-206ENST00000564844 PLNP26678 52 aa15.67■□□□□ 0.1
MAP1LC3B-206ENST00000564844 FOXI1Q12951 378 aa15.67■□□□□ 0.1
MAP1LC3B-206ENST00000564844 NPBQ8NG41 125 aa15.67■□□□□ 0.1
MAP1LC3B-206ENST00000564844 SMIM2Q9BVW6 85 aa15.67■□□□□ 0.1
MAP1LC3B-206ENST00000564844 SETD2Q9BYW2 2564 aaPredicted RBP15.67■□□□□ 0.1
MAP1LC3B-206ENST00000564844 COX8CQ7Z4L0 72 aa15.66■□□□□ 0.1
MAP1LC3B-206ENST00000564844 Q8NA96 180 aa15.66■□□□□ 0.1
MAP1LC3B-206ENST00000564844 SRSF8Q9BRL6 282 aaKnown RBP15.66■□□□□ 0.1
MAP1LC3B-206ENST00000564844 CDSNQ15517 529 aa15.66■□□□□ 0.1
MAP1LC3B-206ENST00000564844 VMO1Q7Z5L0 202 aa15.66■□□□□ 0.1
MAP1LC3B-206ENST00000564844 C16orf92Q96LL3 132 aa15.66■□□□□ 0.1
MAP1LC3B-206ENST00000564844 C8orf86Q6ZUL3 223 aa15.66■□□□□ 0.1
MAP1LC3B-206ENST00000564844 TRAV8-2A0A0B4J237 113 aa15.65■□□□□ 0.1
MAP1LC3B-206ENST00000564844 F6UB75 175 aa15.65■□□□□ 0.1
MAP1LC3B-206ENST00000564844 C2orf66Q6UXQ4 117 aa15.65■□□□□ 0.1
MAP1LC3B-206ENST00000564844 KIR2DL4Q99706 377 aa15.65■□□□□ 0.1
MAP1LC3B-206ENST00000564844 POLQO75417 2590 aa15.65■□□□□ 0.1
MAP1LC3B-206ENST00000564844 ATP6V0E1O15342 81 aa15.65■□□□□ 0.1
MAP1LC3B-206ENST00000564844 CCL21O00585 134 aa15.64■□□□□ 0.09
MAP1LC3B-206ENST00000564844 FOXC1Q12948 553 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms