RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 C7orf77A4D0Y5 90 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
TPM1-209ENST00000558072 S100PP25815 95 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 CRIP1P50238 77 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 RNF212Q495C1 297 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 KCNIP4Q6PIL6 250 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 LINC00322Q6ZN03 302 aaPredicted RBP9.08□□□□□ -0.96
TPM1-209ENST00000558072 ZNF493Q6ZR52 646 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 RPS10P5Q9NQ39 176 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 TP53TG1Q9Y2A0 90 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 AGRNO00468 2067 aa9.08□□□□□ -0.96
TPM1-209ENST00000558072 F2Z2F3 143 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 K7EIL1 84 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 MED14OSP0DP75 135 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 S100A4P26447 101 aaKnown RBP9.07□□□□□ -0.96
TPM1-209ENST00000558072 ZNF80P51504 273 aaPredicted RBP9.07□□□□□ -0.96
TPM1-209ENST00000558072 FXYD7P58549 80 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 ANXA2RQ3ZCQ2 193 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 TSKUQ8WUA8 353 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 BORCS7Q96B45 105 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 RCHY1Q96PM5 261 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 NEU1Q99519 415 aa9.07□□□□□ -0.96
TPM1-209ENST00000558072 RNASE7Q9H1E1 156 aaKnown RBP9.07□□□□□ -0.96
TPM1-209ENST00000558072 TRAV9-1A0A075B6T8 112 aa9.06□□□□□ -0.96
TPM1-209ENST00000558072 CBY3A6NI87 242 aa9.06□□□□□ -0.96
TPM1-209ENST00000558072 ASIPP42127 132 aa9.06□□□□□ -0.96
TPM1-209ENST00000558072 NAGKQ9UJ70 344 aa9.06□□□□□ -0.96
TPM1-209ENST00000558072 FRMD6-AS1P0C7T7 363 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 FOXA3P55318 350 aaPredicted RBP9.05□□□□□ -0.96
TPM1-209ENST00000558072 RRN3P1Q2M238 152 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 DEFB121Q5J5C9 76 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 PRR9Q5T870 116 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 ZNF705AQ6ZN79 300 aaPredicted RBP9.05□□□□□ -0.96
TPM1-209ENST00000558072 CSNK1G2-AS1Q8NCQ2 148 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 SMCO4Q9NRQ5 59 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 IL36BQ9NZH7 164 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 NAT8BQ9UHF3 227 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 TP53TG3Q9ULZ0 132 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 V9GYV3 84 aa9.05□□□□□ -0.96
TPM1-209ENST00000558072 S100A8P05109 93 aa9.04□□□□□ -0.96
TPM1-209ENST00000558072 GIG44P09565 113 aaPredicted RBP9.04□□□□□ -0.96
TPM1-209ENST00000558072 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
TPM1-209ENST00000558072 WDR73Q6P4I2 378 aa9.04□□□□□ -0.96
TPM1-209ENST00000558072 RNF183Q96D59 192 aa9.04□□□□□ -0.96
TPM1-209ENST00000558072 C16orf74Q96GX8 76 aa9.04□□□□□ -0.96
TPM1-209ENST00000558072 SPXQ9BT56 116 aa9.04□□□□□ -0.96
TPM1-209ENST00000558072 NDUFAF3Q9BU61 184 aa9.04□□□□□ -0.96
TPM1-209ENST00000558072 MGAM2Q2M2H8 2515 aa9.04□□□□□ -0.96
TPM1-209ENST00000558072 IGKV3D-20A0A0C4DH25 116 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 A0A1B0GW15 77 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 SMIM27A0A1W2PRY6 76 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 SPRY2O43597 315 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 OR5AL1P0C617 328 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 MIFP14174 115 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 CACNG7P62955 275 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 DEFA6Q01524 100 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 KIR3DS1Q14943 382 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 MUC21Q5SSG8 566 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 C1orf158Q8N1D5 194 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
TPM1-209ENST00000558072 TMEM263Q8WUH6 116 aaKnown RBP9.03□□□□□ -0.96
TPM1-209ENST00000558072 IGHV3OR16-12A0A075B7B8 117 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 SNURFLB1AK76 121 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 COX19Q49B96 90 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 PIK3CD-AS1Q5SR53 167 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 SYT8Q8NBV8 401 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 MRAPQ8TCY5 172 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 PTH2Q96A98 100 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 SPATA25Q9BR10 227 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 ZMAT4Q9H898 229 aa9.02□□□□□ -0.97
TPM1-209ENST00000558072 TMSB15BA0A087X1C1 80 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 TEX48A0A1B0GUV7 120 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 TYMSP04818 313 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 HTN1P15515 57 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 RIGQ13278 110 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 SMIM15Q7Z3B0 74 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 ATP5L2Q7Z4Y8 100 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 PHLDA3Q9Y5J5 127 aa9.01□□□□□ -0.97
TPM1-209ENST00000558072 IGHV3-16A0A0C4DH30 117 aa9□□□□□ -0.97
TPM1-209ENST00000558072 SNAI2O43623 268 aa9□□□□□ -0.97
TPM1-209ENST00000558072 DEFB135Q30KP9 77 aa9□□□□□ -0.97
TPM1-209ENST00000558072 RASL11AQ6T310 242 aa9□□□□□ -0.97
TPM1-209ENST00000558072 ZFP82Q8N141 532 aa9□□□□□ -0.97
TPM1-209ENST00000558072 OR11H2Q8NH07 326 aa9□□□□□ -0.97
TPM1-209ENST00000558072 SSBP4Q9BWG4 385 aaPredicted RBP9□□□□□ -0.97
TPM1-209ENST00000558072 C11orf21Q9P2W6 132 aa9□□□□□ -0.97
TPM1-209ENST00000558072 A0A1B0GUT8 65 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 GRIFINA4D1Z8 144 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 M0R2P5 195 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 GNRH2O43555 120 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 ARMS2P0C7Q2 107 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 IGLC6P0CF74 106 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 NHLRC4P0CG21 123 aaPredicted RBP8.99□□□□□ -0.97
TPM1-209ENST00000558072 RBMY1A1P0DJD3 496 aaKnown RBP8.99□□□□□ -0.97
TPM1-209ENST00000558072 RBMY1CP0DJD4 496 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 CTRLP40313 264 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 TCL1AP56279 114 aa8.99□□□□□ -0.97
TPM1-209ENST00000558072 DAZ2Q13117 558 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms