RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 RPH3ALQ9UNE2 315 aa9.28□□□□□ -0.92
SNRPA1-204ENST00000558020 HSPG2P98160 4391 aa9.28□□□□□ -0.92
SNRPA1-204ENST00000558020 ABCA13Q86UQ4 5058 aa9.28□□□□□ -0.92
SNRPA1-204ENST00000558020 SERTM2A0A1B0GWG4 89 aa9.27□□□□□ -0.93
SNRPA1-204ENST00000558020 K7EQM0 130 aa9.27□□□□□ -0.93
SNRPA1-204ENST00000558020 C10orf126Q8N4M7 172 aa9.27□□□□□ -0.93
SNRPA1-204ENST00000558020 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
SNRPA1-204ENST00000558020 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
SNRPA1-204ENST00000558020 GNRH2O43555 120 aa9.26□□□□□ -0.93
SNRPA1-204ENST00000558020 CIDEAO60543 219 aa9.26□□□□□ -0.93
SNRPA1-204ENST00000558020 NHLRC2Q8NBF2 726 aa9.26□□□□□ -0.93
SNRPA1-204ENST00000558020 ASB13Q8WXK3 278 aa9.26□□□□□ -0.93
SNRPA1-204ENST00000558020 TNFRSF18Q9Y5U5 241 aa9.26□□□□□ -0.93
SNRPA1-204ENST00000558020 IGHV3-16A0A0C4DH30 117 aa9.25□□□□□ -0.93
SNRPA1-204ENST00000558020 PFN1P07737 140 aaKnown RBP9.25□□□□□ -0.93
SNRPA1-204ENST00000558020 DNAH10OSP0CZ25 163 aa9.25□□□□□ -0.93
SNRPA1-204ENST00000558020 LRP1BQ9NZR2 4599 aa9.25□□□□□ -0.93
SNRPA1-204ENST00000558020 A0A087WTM6 91 aa9.24□□□□□ -0.93
SNRPA1-204ENST00000558020 EPM2AB3EWF7 344 aa9.24□□□□□ -0.93
SNRPA1-204ENST00000558020 TAAR5O14804 337 aa9.24□□□□□ -0.93
SNRPA1-204ENST00000558020 MBP02144 154 aa9.24□□□□□ -0.93
SNRPA1-204ENST00000558020 CRYGDP07320 174 aa9.24□□□□□ -0.93
SNRPA1-204ENST00000558020 TIRAPP58753 221 aa9.24□□□□□ -0.93
SNRPA1-204ENST00000558020 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
SNRPA1-204ENST00000558020 TRAV8-6A0A0B4J262 113 aa9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 FBLL1A6NHQ2 334 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 HMGB3O15347 200 aaKnown RBP9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 PPT1P50897 306 aa9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 RAB2AP61019 212 aa9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 ZNF876PQ49A33 203 aa9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 SH3BGRL3Q9H299 93 aa9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 WFDC1Q9HC57 220 aa9.23□□□□□ -0.93
SNRPA1-204ENST00000558020 TRAV8-1A0A0A6YYK1 113 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 IGHV3-38A0A0C4DH36 116 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 F6UZH7 168 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 PSCAO43653 123 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 EIF3GO75821 320 aaKnown RBP eCLIP9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 TYMSP04818 313 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 ARL14EPLP0DKL9 152 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 SERF2P84101 59 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 ZFP69Q49AA0 526 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 OR2G3Q8NGZ4 309 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 TVP23CQ96ET8 276 aa9.22□□□□□ -0.93
SNRPA1-204ENST00000558020 STAG3L2P0CL84 134 aa9.21□□□□□ -0.94
SNRPA1-204ENST00000558020 STAG3L3P0CL85 134 aa9.21□□□□□ -0.94
SNRPA1-204ENST00000558020 GATA1P15976 413 aaPredicted RBP9.21□□□□□ -0.94
SNRPA1-204ENST00000558020 GNG5P63218 68 aa9.21□□□□□ -0.94
SNRPA1-204ENST00000558020 SAPCD1Q5SSQ6 148 aa9.21□□□□□ -0.94
SNRPA1-204ENST00000558020 RAB24Q969Q5 203 aa9.21□□□□□ -0.94
SNRPA1-204ENST00000558020 PSMG3Q9BT73 122 aaPredicted RBP9.21□□□□□ -0.94
SNRPA1-204ENST00000558020 TMEM167BQ9NRX6 74 aa9.21□□□□□ -0.94
SNRPA1-204ENST00000558020 TRBV6-4A0A1B0GX49 114 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 CXorf1O96002 111 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 TCRAP04437 139 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 GCSHP23434 173 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 GCHFRP30047 84 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 RHOHQ15669 191 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 SMUG1Q53HV7 270 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 OR10J3Q5JRS4 329 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 SLC25A29Q8N8R3 303 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 HSD17B11Q8NBQ5 300 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 SGK494Q96LW2 274 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 ACTR3CQ9C0K3 210 aaPredicted RBP9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 PSG8Q9UQ74 426 aa9.2□□□□□ -0.94
SNRPA1-204ENST00000558020 DNAH5Q8TE73 4624 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 GCGP01275 180 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 SUMO1P63165 101 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 CFAP126Q5VTH2 177 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 SUN5Q8TC36 379 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 FRZBQ92765 325 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 PTH2Q96A98 100 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 EPDR1Q9UM22 224 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 TNFSF18Q9UNG2 199 aa9.19□□□□□ -0.94
SNRPA1-204ENST00000558020 RS1O15537 224 aa9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 MGST1P10620 155 aaKnown RBP9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 FUSP35637 526 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 FLI1Q01543 452 aaPredicted RBP9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 CYB561D1Q8N8Q1 229 aa9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 INO80EQ8NBZ0 244 aaPredicted RBP9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 AQP10Q96PS8 301 aa9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 MED28Q9H204 178 aa9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 ALG5Q9Y673 324 aa9.18□□□□□ -0.94
SNRPA1-204ENST00000558020 IBA57-AS1B1ANH7 110 aa9.17□□□□□ -0.94
SNRPA1-204ENST00000558020 ATP6V0CP27449 155 aa9.17□□□□□ -0.94
SNRPA1-204ENST00000558020 XGP55808 180 aa9.17□□□□□ -0.94
SNRPA1-204ENST00000558020 TMEM75Q8N9X5 138 aa9.17□□□□□ -0.94
SNRPA1-204ENST00000558020 NTN5Q8WTR8 489 aaPredicted RBP9.17□□□□□ -0.94
SNRPA1-204ENST00000558020 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
SNRPA1-204ENST00000558020 BORCS7-ASMTA0A0B4J1R7 106 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 A0A1W2PRE2 83 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 PTTG1O95997 202 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 IFNA7P01567 189 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 INAFM2P0DMQ5 153 aa9.16□□□□□ -0.94
SNRPA1-204ENST00000558020 S100A4P26447 101 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms