RNA–Protein interactions for RNA: ENST00000557446.5

HIF1A-211, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 5

Gene HIF1A, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-211ENST00000557446 HOXA5P20719 270 aa13.86□□□□□ -0.19
HIF1A-211ENST00000557446 SMUG1Q53HV7 270 aa13.86□□□□□ -0.19
HIF1A-211ENST00000557446 SAPCD1Q5SSQ6 148 aa13.86□□□□□ -0.19
HIF1A-211ENST00000557446 EIF5AL1Q6IS14 154 aaKnown RBP13.86□□□□□ -0.19
HIF1A-211ENST00000557446 Q86TA4 180 aa13.86□□□□□ -0.19
HIF1A-211ENST00000557446 UBE2DNLQ8IWF7 75 aa13.86□□□□□ -0.19
HIF1A-211ENST00000557446 PAGE4O60829 102 aa13.85□□□□□ -0.19
HIF1A-211ENST00000557446 TYMSP04818 313 aa13.85□□□□□ -0.19
HIF1A-211ENST00000557446 LGALS9BQ3B8N2 356 aa13.85□□□□□ -0.19
HIF1A-211ENST00000557446 POM121L12Q8N7R1 296 aa13.85□□□□□ -0.19
HIF1A-211ENST00000557446 SDF2L1Q9HCN8 221 aa13.85□□□□□ -0.19
HIF1A-211ENST00000557446 TRAV26-1A0A087WT03 109 aa13.84□□□□□ -0.19
HIF1A-211ENST00000557446 GNRH2O43555 120 aa13.84□□□□□ -0.19
HIF1A-211ENST00000557446 NUDT3O95989 172 aa13.84□□□□□ -0.19
HIF1A-211ENST00000557446 PFN1P07737 140 aaKnown RBP13.84□□□□□ -0.19
HIF1A-211ENST00000557446 SLC51BQ86UW2 128 aa13.84□□□□□ -0.19
HIF1A-211ENST00000557446 KCNS1Q96KK3 526 aa13.84□□□□□ -0.19
HIF1A-211ENST00000557446 TCEAL7Q9BRU2 100 aa13.84□□□□□ -0.19
HIF1A-211ENST00000557446 IGHV3-16A0A0C4DH30 117 aa13.83□□□□□ -0.2
HIF1A-211ENST00000557446 RAB5CP51148 216 aa13.83□□□□□ -0.2
HIF1A-211ENST00000557446 UBE2G1P62253 170 aa13.83□□□□□ -0.2
HIF1A-211ENST00000557446 C9orf62Q8N4C0 152 aa13.83□□□□□ -0.2
HIF1A-211ENST00000557446 SPXQ9BT56 116 aa13.83□□□□□ -0.2
HIF1A-211ENST00000557446 A0A0J9YY99 117 aa13.82□□□□□ -0.2
HIF1A-211ENST00000557446 A0A1B0GVG6 124 aa13.82□□□□□ -0.2
HIF1A-211ENST00000557446 IGHV3-53P01767 116 aa13.82□□□□□ -0.2
HIF1A-211ENST00000557446 AKR1C3P42330 323 aa13.82□□□□□ -0.2
HIF1A-211ENST00000557446 SULT1A2P50226 295 aa13.82□□□□□ -0.2
HIF1A-211ENST00000557446 FMC1Q96HJ9 113 aa13.82□□□□□ -0.2
HIF1A-211ENST00000557446 C11orf21Q9P2W6 132 aa13.82□□□□□ -0.2
HIF1A-211ENST00000557446 NACAE9PAV3 2078 aa13.81□□□□□ -0.2
HIF1A-211ENST00000557446 MUC4Q99102 2169 aa13.8□□□□□ -0.2
HIF1A-211ENST00000557446 SCO2A0A1W2PP80 73 aa13.79□□□□□ -0.2
HIF1A-211ENST00000557446 RNF212Q495C1 297 aa13.79□□□□□ -0.2
HIF1A-211ENST00000557446 RASL10AQ92737 203 aa13.79□□□□□ -0.2
HIF1A-211ENST00000557446 ZFP30Q9Y2G7 519 aa13.79□□□□□ -0.2
HIF1A-211ENST00000557446 KMT2AQ03164 3969 aa13.79□□□□□ -0.2
HIF1A-211ENST00000557446 TRAV1-1A0A0B4J248 108 aa13.78□□□□□ -0.2
HIF1A-211ENST00000557446 TRBV6-1A0A0K0K1D8 114 aa13.78□□□□□ -0.2
HIF1A-211ENST00000557446 H3BNG1 76 aa13.78□□□□□ -0.2
HIF1A-211ENST00000557446 TEX46H3BTG2 121 aa13.78□□□□□ -0.2
HIF1A-211ENST00000557446 M0R2P5 195 aa13.78□□□□□ -0.2
HIF1A-211ENST00000557446 ZC2HC1AQ96GY0 325 aa13.78□□□□□ -0.2
HIF1A-211ENST00000557446 MANBALQ9NQG1 85 aa13.78□□□□□ -0.2
HIF1A-211ENST00000557446 GNG13Q9P2W3 67 aa13.78□□□□□ -0.2
HIF1A-211ENST00000557446 FABP5P3A8MUU1 101 aa13.77□□□□□ -0.21
HIF1A-211ENST00000557446 LTAP01374 205 aa13.77□□□□□ -0.21
HIF1A-211ENST00000557446 CCL20P78556 96 aa13.77□□□□□ -0.21
HIF1A-211ENST00000557446 VSIG2Q96IQ7 327 aa13.77□□□□□ -0.21
HIF1A-211ENST00000557446 VPS13DQ5THJ4 4388 aa13.76□□□□□ -0.21
HIF1A-211ENST00000557446 SFTA3P0C7M3 94 aa13.76□□□□□ -0.21
HIF1A-211ENST00000557446 COX8CQ7Z4L0 72 aa13.76□□□□□ -0.21
HIF1A-211ENST00000557446 IGKV3D-20A0A0C4DH25 116 aa13.75□□□□□ -0.21
HIF1A-211ENST00000557446 CCL18P55774 89 aa13.75□□□□□ -0.21
HIF1A-211ENST00000557446 ZNF479Q96JC4 524 aa13.75□□□□□ -0.21
HIF1A-211ENST00000557446 C9orf85Q96MD7 179 aa13.75□□□□□ -0.21
HIF1A-211ENST00000557446 IGLV2-18A0A075B6J9 118 aa13.74□□□□□ -0.21
HIF1A-211ENST00000557446 TRAV4A0A0B4J268 109 aa13.74□□□□□ -0.21
HIF1A-211ENST00000557446 TRGV4A0A0C4DH28 118 aa13.74□□□□□ -0.21
HIF1A-211ENST00000557446 SH2D1AO60880 128 aa13.74□□□□□ -0.21
HIF1A-211ENST00000557446 CRIP1P50238 77 aa13.74□□□□□ -0.21
HIF1A-211ENST00000557446 FAM3BP58499 235 aaPredicted RBP13.74□□□□□ -0.21
HIF1A-211ENST00000557446 FHL2Q14192 279 aa13.74□□□□□ -0.21
HIF1A-211ENST00000557446 NHLRC2Q8NBF2 726 aa13.74□□□□□ -0.21
HIF1A-211ENST00000557446 PRO0255Q9UI72 69 aa13.74□□□□□ -0.21
HIF1A-211ENST00000557446 C9JCJ5 164 aa13.73□□□□□ -0.21
HIF1A-211ENST00000557446 M0R2N4 97 aa13.73□□□□□ -0.21
HIF1A-211ENST00000557446 PAX4O43316 350 aa13.73□□□□□ -0.21
HIF1A-211ENST00000557446 S100A9P06702 114 aaKnown RBP13.73□□□□□ -0.21
HIF1A-211ENST00000557446 RNASE3P12724 160 aaKnown RBP13.73□□□□□ -0.21
HIF1A-211ENST00000557446 NKX2-5P52952 324 aaPredicted RBP13.73□□□□□ -0.21
HIF1A-211ENST00000557446 SLAQ13239 276 aa13.73□□□□□ -0.21
HIF1A-211ENST00000557446 FAM162BQ5T6X4 162 aa13.73□□□□□ -0.21
HIF1A-211ENST00000557446 LINC00588Q9Y4M8 146 aa13.73□□□□□ -0.21
HIF1A-211ENST00000557446 A0A096LPF7 62 aa13.72□□□□□ -0.21
HIF1A-211ENST00000557446 M0R036 132 aa13.72□□□□□ -0.21
HIF1A-211ENST00000557446 ORM1P02763 201 aa13.72□□□□□ -0.21
HIF1A-211ENST00000557446 S100A4P26447 101 aaKnown RBP13.72□□□□□ -0.21
HIF1A-211ENST00000557446 ASIPP42127 132 aa13.72□□□□□ -0.21
HIF1A-211ENST00000557446 CRYBA4P53673 196 aa13.72□□□□□ -0.21
HIF1A-211ENST00000557446 OR4C5Q8NGB2 326 aa13.72□□□□□ -0.21
HIF1A-211ENST00000557446 HHLA3Q9XRX5 114 aa13.72□□□□□ -0.21
HIF1A-211ENST00000557446 B4DEV8 164 aa13.71□□□□□ -0.21
HIF1A-211ENST00000557446 ZNF674Q2M3X9 581 aa13.71□□□□□ -0.21
HIF1A-211ENST00000557446 ZNF876PQ49A33 203 aa13.71□□□□□ -0.21
HIF1A-211ENST00000557446 ALKAL2Q6UX46 152 aa13.71□□□□□ -0.21
HIF1A-211ENST00000557446 C11orf52Q96A22 123 aa13.71□□□□□ -0.21
HIF1A-211ENST00000557446 TXNDC17Q9BRA2 123 aa13.71□□□□□ -0.21
HIF1A-211ENST00000557446 ICOSQ9Y6W8 199 aa13.71□□□□□ -0.21
HIF1A-211ENST00000557446 IFNA1P01562 189 aa13.7□□□□□ -0.22
HIF1A-211ENST00000557446 BAGE2Q86Y30 109 aa13.7□□□□□ -0.22
HIF1A-211ENST00000557446 DNAH6Q9C0G6 4158 aa13.7□□□□□ -0.22
HIF1A-211ENST00000557446 PGPEP1LA6NFU8 196 aa13.69□□□□□ -0.22
HIF1A-211ENST00000557446 KRBOX1C9JBD0 128 aa13.69□□□□□ -0.22
HIF1A-211ENST00000557446 MEF2BQ02080 365 aaPredicted RBP13.69□□□□□ -0.22
HIF1A-211ENST00000557446 ZNF506Q5JVG8 444 aa13.69□□□□□ -0.22
HIF1A-211ENST00000557446 ZNRF2Q8NHG8 242 aa13.69□□□□□ -0.22
HIF1A-211ENST00000557446 H3BVH4 76 aa13.68□□□□□ -0.22
HIF1A-211ENST00000557446 BCL2P10415 239 aa13.68□□□□□ -0.22
HIF1A-211ENST00000557446 RPL35P42766 123 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms