RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 CASC2Q6XLA1 102 aa1.31□□□□□ -2.2
KTN1-222ENST00000555506 SIP14410 1827 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.3□□□□□ -2.2
KTN1-222ENST00000555506 CECR2Q9BXF3 1484 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 WDR7Q9Y4E6 1490 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 PTPRGP23470 1445 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 ANK1P16157 1881 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 IBTKQ9P2D0 1353 aaPredicted RBP1.3□□□□□ -2.2
KTN1-222ENST00000555506 TMEM2Q9UHN6 1383 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 KIF13AQ9H1H9 1805 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 KIAA0100Q14667 2235 aaKnown RBP1.3□□□□□ -2.2
KTN1-222ENST00000555506 IGHV1-24A0A0C4DH33 117 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 F8W1H4 67 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 M0R2P5 195 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 CCL25O15444 150 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 PITX3O75364 302 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 COX7CP15954 63 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 GKN2Q86XP6 184 aa1.3□□□□□ -2.2
KTN1-222ENST00000555506 CASP8AP2Q9UKL3 1982 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 ADGRB1O14514 1584 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 KIDINS220Q9ULH0 1771 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 ZGRF1Q86YA3 2104 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 ROCK2O75116 1388 aaKnown RBP1.29□□□□□ -2.2
KTN1-222ENST00000555506 AKAP11Q9UKA4 1901 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 LOC107984156A0A0G2JMH3 177 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 M0R129 80 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 NUPR1O60356 82 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 EDF1O60869 148 aaKnown RBP1.29□□□□□ -2.2
KTN1-222ENST00000555506 IGF2P01344 180 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 RBP4P02753 201 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 ZNF25P17030 456 aaPredicted RBP1.29□□□□□ -2.2
KTN1-222ENST00000555506 NEDD8Q15843 81 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 ARL17AQ8IVW1 177 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 CGREF1Q99674 301 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 TMEM191AQ9H0A3 160 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 TET1Q8NFU7 2136 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 UHRF1BP1LA0JNW5 1464 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 BCL9LQ86UU0 1499 aa1.29□□□□□ -2.2
KTN1-222ENST00000555506 HELZ2Q9BYK8 2649 aaKnown RBP1.28□□□□□ -2.2
KTN1-222ENST00000555506 MYOM3Q5VTT5 1437 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 ERBINQ96RT1 1412 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 DLG5Q8TDM6 1919 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 CACNA1BQ00975 2339 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 YPEL1O60688 119 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 ATP11AUNQ6ZP68 121 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 ATOH7Q8N100 152 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 ATP6V0E2Q8NHE4 81 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 SMIM7Q9BQ49 75 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 SAR1AQ9NR31 198 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 C22orf24Q9Y442 160 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 SPAG17Q6Q759 2223 aa1.28□□□□□ -2.2
KTN1-222ENST00000555506 TECTAO75443 2155 aa1.28□□□□□ -2.21
KTN1-222ENST00000555506 FBN3Q75N90 2809 aa1.28□□□□□ -2.21
KTN1-222ENST00000555506 SPEF2Q9C093 1822 aa1.27□□□□□ -2.21
KTN1-222ENST00000555506 PTPRDP23468 1912 aa1.27□□□□□ -2.21
KTN1-222ENST00000555506 CDC42EP2O14613 210 aa1.27□□□□□ -2.21
KTN1-222ENST00000555506 DNAL4O96015 105 aa1.27□□□□□ -2.21
KTN1-222ENST00000555506 C5orf17Q8NAS9 161 aa1.27□□□□□ -2.21
KTN1-222ENST00000555506 SNRNP200O75643 2136 aaKnown RBP1.27□□□□□ -2.21
KTN1-222ENST00000555506 ATG2AQ2TAZ0 1938 aa1.27□□□□□ -2.21
KTN1-222ENST00000555506 NALCNQ8IZF0 1738 aa1.27□□□□□ -2.21
KTN1-222ENST00000555506 ASCC3Q8N3C0 2202 aaKnown RBP1.26□□□□□ -2.21
KTN1-222ENST00000555506 CITO14578 2027 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 A0A0G2JMM0 328 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 A0A1W2PPB8 328 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 KIR3DP1A8MWS1 328 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 H3BRM9 83 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 APOC1P02654 83 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 PYYP10082 97 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 SPRNQ5BIV9 151 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 TCTEX1D1Q8N7M0 179 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 DPH3Q96FX2 82 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 CCDC167Q9P0B6 97 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 NCOA6Q14686 2063 aaPredicted RBP1.26□□□□□ -2.21
KTN1-222ENST00000555506 MBD5Q9P267 1494 aa1.26□□□□□ -2.21
KTN1-222ENST00000555506 ABCA4P78363 2273 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 CASZ1Q86V15 1759 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 A0A0J9YY99 117 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 LOC100130705A0A1B0GUX0 176 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 FAM92AA1XBS5 289 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 ADCYAP1P18509 176 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 MIC13Q5XKP0 118 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 SCIMPQ6UWF3 145 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 LINC00322Q6ZN03 302 aaPredicted RBP1.25□□□□□ -2.21
KTN1-222ENST00000555506 Q6ZUT4 128 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 SLC25A26Q70HW3 274 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 SNX29P2Q8IUI4 249 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 TMEM14CQ9P0S9 112 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 NOP16Q9Y3C1 178 aaKnown RBP1.25□□□□□ -2.21
KTN1-222ENST00000555506 SPTBP11277 2137 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 COL6A6A6NMZ7 2263 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 PLXNA2O75051 1894 aa1.25□□□□□ -2.21
KTN1-222ENST00000555506 A0A1W2PRS3 328 aa1.24□□□□□ -2.21
KTN1-222ENST00000555506 FAM25AB3EWG3 89 aa1.24□□□□□ -2.21
KTN1-222ENST00000555506 FAM25CB3EWG5 89 aa1.24□□□□□ -2.21
KTN1-222ENST00000555506 FAM25GB3EWG6 89 aa1.24□□□□□ -2.21
KTN1-222ENST00000555506 APODP05090 189 aa1.24□□□□□ -2.21
KTN1-222ENST00000555506 GUCA1AP43080 201 aaPredicted RBP1.24□□□□□ -2.21
KTN1-222ENST00000555506 FLG2Q5D862 2391 aaPredicted RBP1.24□□□□□ -2.21
KTN1-222ENST00000555506 SMG6Q86US8 1419 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms